RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ZBTB22O15209 634 aa15.57■□□□□ 0.08
HDAC6-229ENST00000486665 AOC2O75106 756 aa15.57■□□□□ 0.08
HDAC6-229ENST00000486665 RAD17O75943 681 aa15.57■□□□□ 0.08
HDAC6-229ENST00000486665 GSPT1P15170 499 aaKnown RBP15.57■□□□□ 0.08
HDAC6-229ENST00000486665 ZAP70P43403 619 aa15.57■□□□□ 0.08
HDAC6-229ENST00000486665 CHAF1AQ13111 956 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-229ENST00000486665 DLK2Q6UY11 383 aa15.57■□□□□ 0.08
HDAC6-229ENST00000486665 PAXIP1Q6ZW49 1069 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-229ENST00000486665 SPATA5Q8NB90 893 aa15.57■□□□□ 0.08
HDAC6-229ENST00000486665 TRPM4Q8TD43 1214 aa15.57■□□□□ 0.08
HDAC6-229ENST00000486665 EDC3Q96F86 508 aaKnown RBP15.57■□□□□ 0.08
HDAC6-229ENST00000486665 GLIS2Q9BZE0 524 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-229ENST00000486665 ADARB2Q9NS39 739 aaKnown RBP15.57■□□□□ 0.08
HDAC6-229ENST00000486665 TLL2Q9Y6L7 1015 aa15.57■□□□□ 0.08
HDAC6-229ENST00000486665 SEMA3EO15041 775 aa15.56■□□□□ 0.08
HDAC6-229ENST00000486665 FRAT2O75474 233 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-229ENST00000486665 TTC22Q5TAA0 569 aa15.56■□□□□ 0.08
HDAC6-229ENST00000486665 PODNQ7Z5L7 613 aa15.56■□□□□ 0.08
HDAC6-229ENST00000486665 DNAJC2Q99543 621 aaKnown RBP15.56■□□□□ 0.08
HDAC6-229ENST00000486665 ANTXR1Q9H6X2 564 aa15.56■□□□□ 0.08
HDAC6-229ENST00000486665 TSKSQ9UJT2 592 aa15.56■□□□□ 0.08
HDAC6-229ENST00000486665 DENND2AQ9ULE3 1009 aa15.56■□□□□ 0.08
HDAC6-229ENST00000486665 COL1A1P02452 1464 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-229ENST00000486665 CYP2E1P05181 493 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-229ENST00000486665 GTF2IP78347 998 aa15.55■□□□□ 0.08
HDAC6-229ENST00000486665 MAP2K1Q02750 393 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-229ENST00000486665 CIAPIN1Q6FI81 312 aa15.55■□□□□ 0.08
HDAC6-229ENST00000486665 TBC1D9Q6ZT07 1266 aa15.55■□□□□ 0.08
HDAC6-229ENST00000486665 FAM205AQ6ZU69 1335 aa15.54■□□□□ 0.08
HDAC6-229ENST00000486665 GOLIM4O00461 696 aa15.54■□□□□ 0.08
HDAC6-229ENST00000486665 ABHD8Q96I13 439 aa15.54■□□□□ 0.08
HDAC6-229ENST00000486665 MXD3Q9BW11 206 aa15.54■□□□□ 0.08
HDAC6-229ENST00000486665 PIH1D3Q9NQM4 214 aaKnown RBP15.54■□□□□ 0.08
HDAC6-229ENST00000486665 PGAP2Q9UHJ9 254 aa15.54■□□□□ 0.08
HDAC6-229ENST00000486665 POLR2AP24928 1970 aaKnown RBP15.53■□□□□ 0.08
HDAC6-229ENST00000486665 CELF2O95319 508 aaKnown RBP15.53■□□□□ 0.08
HDAC6-229ENST00000486665 SDSP20132 328 aa15.53■□□□□ 0.08
HDAC6-229ENST00000486665 GRIK5Q16478 980 aa15.53■□□□□ 0.08
HDAC6-229ENST00000486665 TTLL5Q6EMB2 1281 aa15.53■□□□□ 0.08
HDAC6-229ENST00000486665 SAPCD2Q86UD0 394 aa15.53■□□□□ 0.08
HDAC6-229ENST00000486665 FBXW7Q969H0 707 aa15.53■□□□□ 0.08
HDAC6-229ENST00000486665 PAG1Q9NWQ8 432 aa15.53■□□□□ 0.08
HDAC6-229ENST00000486665 ZBTB12Q9Y330 459 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-229ENST00000486665 PDS5AQ29RF7 1337 aaKnown RBP15.52■□□□□ 0.08
HDAC6-229ENST00000486665 USP17L3A6NCW0 530 aa15.52■□□□□ 0.08
HDAC6-229ENST00000486665 USP17L4A6NCW7 530 aa15.52■□□□□ 0.08
HDAC6-229ENST00000486665 TRIM6-TRIM34B2RNG4 842 aa15.52■□□□□ 0.08
HDAC6-229ENST00000486665 EGFRP00533 1210 aa15.52■□□□□ 0.08
HDAC6-229ENST00000486665 DACT2Q5SW24 774 aa15.52■□□□□ 0.08
HDAC6-229ENST00000486665 USP17L1Q7RTZ2 530 aa15.52■□□□□ 0.08
HDAC6-229ENST00000486665 ZIC5Q96T25 663 aa15.52■□□□□ 0.08
HDAC6-229ENST00000486665 SCN9AQ15858 1988 aa15.52■□□□□ 0.07
HDAC6-229ENST00000486665 AKAP11Q9UKA4 1901 aa15.52■□□□□ 0.07
HDAC6-229ENST00000486665 CASP8AP2Q9UKL3 1982 aa15.51■□□□□ 0.07
HDAC6-229ENST00000486665 ECE1P42892 770 aa15.51■□□□□ 0.07
HDAC6-229ENST00000486665 STRIP1Q5VSL9 837 aa15.51■□□□□ 0.07
HDAC6-229ENST00000486665 CERS5Q8N5B7 392 aa15.51■□□□□ 0.07
HDAC6-229ENST00000486665 WDR66Q8TBY9 1149 aa15.51■□□□□ 0.07
HDAC6-229ENST00000486665 RILPL2Q969X0 211 aa15.51■□□□□ 0.07
HDAC6-229ENST00000486665 ZNF408Q9H9D4 720 aa15.51■□□□□ 0.07
HDAC6-229ENST00000486665 CNOT7Q9UIV1 285 aaKnown RBP15.51■□□□□ 0.07
HDAC6-229ENST00000486665 PSMD14O00487 310 aa15.5■□□□□ 0.07
HDAC6-229ENST00000486665 CHGBP05060 677 aa15.5■□□□□ 0.07
HDAC6-229ENST00000486665 VIL1P09327 827 aaKnown RBP15.5■□□□□ 0.07
HDAC6-229ENST00000486665 BMP2KLQ5H9B9 411 aa15.5■□□□□ 0.07
HDAC6-229ENST00000486665 SAMD7Q7Z3H4 446 aa15.5■□□□□ 0.07
HDAC6-229ENST00000486665 MICALL2Q8IY33 904 aa15.5■□□□□ 0.07
HDAC6-229ENST00000486665 EVI5LQ96CN4 794 aa15.5■□□□□ 0.07
HDAC6-229ENST00000486665 ABCF2Q9UG63 623 aa15.5■□□□□ 0.07
HDAC6-229ENST00000486665 SALL1Q9NSC2 1324 aa15.49■□□□□ 0.07
HDAC6-229ENST00000486665 TNIP1Q15025 636 aa15.49■□□□□ 0.07
HDAC6-229ENST00000486665 TTF1Q15361 905 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-229ENST00000486665 SLFNL1Q499Z3 407 aa15.49■□□□□ 0.07
HDAC6-229ENST00000486665 MFSD14BQ5SR56 506 aa15.49■□□□□ 0.07
HDAC6-229ENST00000486665 USP48Q86UV5 1035 aa15.49■□□□□ 0.07
HDAC6-229ENST00000486665 KBTBD3Q8NAB2 608 aa15.49■□□□□ 0.07
HDAC6-229ENST00000486665 PRDX5P30044 214 aa15.48■□□□□ 0.07
HDAC6-229ENST00000486665 FKBP1AP62942 108 aaKnown RBP15.48■□□□□ 0.07
HDAC6-229ENST00000486665 RSBN1LQ6PCB5 846 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-229ENST00000486665 ZNF384Q8TF68 577 aa15.48■□□□□ 0.07
HDAC6-229ENST00000486665 TBC1D22AQ8WUA7 517 aa15.48■□□□□ 0.07
HDAC6-229ENST00000486665 LRP2BPQ9P2M1 347 aa15.48■□□□□ 0.07
HDAC6-229ENST00000486665 IDH1O75874 414 aaKnown RBP15.47■□□□□ 0.07
HDAC6-229ENST00000486665 MAP2K2P36507 400 aa15.47■□□□□ 0.07
HDAC6-229ENST00000486665 TBC1D10BQ4KMP7 808 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-229ENST00000486665 ERICH6Q7L0X2 663 aa15.47■□□□□ 0.07
HDAC6-229ENST00000486665 ZC3H15Q8WU90 426 aaKnown RBP15.47■□□□□ 0.07
HDAC6-229ENST00000486665 GMLQ99445 158 aa15.47■□□□□ 0.07
HDAC6-229ENST00000486665 FSD1Q9BTV5 496 aa15.47■□□□□ 0.07
HDAC6-229ENST00000486665 RAI14Q9P0K7 980 aa15.47■□□□□ 0.07
HDAC6-229ENST00000486665 F8W031 263 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-229ENST00000486665 LDHBP07195 334 aaKnown RBP15.46■□□□□ 0.07
HDAC6-229ENST00000486665 MECOMQ03112 1051 aa15.46■□□□□ 0.07
HDAC6-229ENST00000486665 SPTY2D1Q68D10 685 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-229ENST00000486665 CDC37L1Q7L3B6 337 aa15.46■□□□□ 0.07
HDAC6-229ENST00000486665 ZGPATQ8N5A5 531 aaKnown RBP15.46■□□□□ 0.07
HDAC6-229ENST00000486665 BEGAINQ9BUH8 593 aa15.46■□□□□ 0.07
HDAC6-229ENST00000486665 ASTN2O75129 1339 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-229ENST00000486665 ADM5C9JUS6 153 aa15.45■□□□□ 0.06
HDAC6-229ENST00000486665 H7C1D1 291 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms