RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 SEPT12Q8IYM1 358 aa8.74□□□□□ -1.01
TMC1-204ENST00000486417 TTLL11Q8NHH1 800 aa8.74□□□□□ -1.01
TMC1-204ENST00000486417 EPS8L1Q8TE68 723 aa8.74□□□□□ -1.01
TMC1-204ENST00000486417 FAM163AQ96GL9 167 aaPredicted RBP8.74□□□□□ -1.01
TMC1-204ENST00000486417 ZFRQ96KR1 1074 aaKnown RBP8.74□□□□□ -1.01
TMC1-204ENST00000486417 CCDC85AQ96PX6 553 aaPredicted RBP8.74□□□□□ -1.01
TMC1-204ENST00000486417 PUS3Q9BZE2 481 aaKnown RBP8.74□□□□□ -1.01
TMC1-204ENST00000486417 SLKQ9H2G2 1235 aaPredicted RBP8.74□□□□□ -1.01
TMC1-204ENST00000486417 BOLA2Q9H3K6 86 aa8.74□□□□□ -1.01
TMC1-204ENST00000486417 ANTXR1Q9H6X2 564 aa8.74□□□□□ -1.01
TMC1-204ENST00000486417 GREM2Q9H772 168 aa8.74□□□□□ -1.01
TMC1-204ENST00000486417 K7ELQ4 463 aaPredicted RBP8.73□□□□□ -1.01
TMC1-204ENST00000486417 HIP1O00291 1037 aa8.73□□□□□ -1.01
TMC1-204ENST00000486417 NTSR2O95665 410 aa8.73□□□□□ -1.01
TMC1-204ENST00000486417 ITGA6P23229 1130 aa8.73□□□□□ -1.01
TMC1-204ENST00000486417 PBX2P40425 430 aa8.73□□□□□ -1.01
TMC1-204ENST00000486417 IFIT5Q13325 482 aaKnown RBP8.73□□□□□ -1.01
TMC1-204ENST00000486417 MTMR2Q13614 643 aa8.73□□□□□ -1.01
TMC1-204ENST00000486417 PUS10Q3MIT2 529 aaKnown RBP8.73□□□□□ -1.01
TMC1-204ENST00000486417 TAF7LQ5H9L4 462 aa8.73□□□□□ -1.01
TMC1-204ENST00000486417 RC3H1Q5TC82 1133 aaKnown RBP8.73□□□□□ -1.01
TMC1-204ENST00000486417 CWC27Q6UX04 472 aaKnown RBP8.73□□□□□ -1.01
TMC1-204ENST00000486417 RUFY2Q8WXA3 655 aa8.73□□□□□ -1.01
TMC1-204ENST00000486417 TSC1Q92574 1164 aa8.73□□□□□ -1.01
TMC1-204ENST00000486417 FSD1Q9BTV5 496 aa8.73□□□□□ -1.01
TMC1-204ENST00000486417 LSG1Q9H089 658 aaKnown RBP8.73□□□□□ -1.01
TMC1-204ENST00000486417 ZNF652Q9Y2D9 606 aa8.73□□□□□ -1.01
TMC1-204ENST00000486417 COL4A1P02462 1669 aa8.73□□□□□ -1.01
TMC1-204ENST00000486417 MED23Q9ULK4 1368 aa8.72□□□□□ -1.01
TMC1-204ENST00000486417 SH3TC1Q8TE82 1336 aa8.72□□□□□ -1.01
TMC1-204ENST00000486417 A0A1B0GUL7 405 aa8.72□□□□□ -1.01
TMC1-204ENST00000486417 ANKRD18BA2A2Z9 1011 aa8.72□□□□□ -1.01
TMC1-204ENST00000486417 KCNQ4P56696 695 aa8.72□□□□□ -1.01
TMC1-204ENST00000486417 ANAPC15P60006 121 aa8.72□□□□□ -1.01
TMC1-204ENST00000486417 SLF2Q8IX21 1173 aa8.72□□□□□ -1.01
TMC1-204ENST00000486417 RGS22Q8NE09 1264 aa8.72□□□□□ -1.01
TMC1-204ENST00000486417 IL17RAQ96F46 866 aa8.72□□□□□ -1.01
TMC1-204ENST00000486417 HAUS7Q99871 368 aa8.72□□□□□ -1.01
TMC1-204ENST00000486417 UTP14AQ9BVJ6 771 aaKnown RBP8.72□□□□□ -1.01
TMC1-204ENST00000486417 TRIM34Q9BYJ4 488 aa8.72□□□□□ -1.01
TMC1-204ENST00000486417 CCNL1Q9UK58 526 aaPredicted RBP8.72□□□□□ -1.01
TMC1-204ENST00000486417 PALD1Q9ULE6 856 aa8.72□□□□□ -1.01
TMC1-204ENST00000486417 NIP7Q9Y221 180 aaKnown RBP eCLIP8.72□□□□□ -1.01
TMC1-204ENST00000486417 RTL9Q8NET4 1388 aa8.71□□□□□ -1.01
TMC1-204ENST00000486417 ABCC12Q96J65 1359 aa8.71□□□□□ -1.01
TMC1-204ENST00000486417 TNRC6CQ9HCJ0 1690 aaKnown RBP8.71□□□□□ -1.01
TMC1-204ENST00000486417 C6orf229H3BNL8 230 aa8.71□□□□□ -1.01
TMC1-204ENST00000486417 HSPA4P34932 840 aa8.71□□□□□ -1.01
TMC1-204ENST00000486417 NMIQ13287 307 aaPredicted RBP8.71□□□□□ -1.01
TMC1-204ENST00000486417 IRF5Q13568 498 aa8.71□□□□□ -1.01
TMC1-204ENST00000486417 CLEC4GQ6UXB4 293 aa8.71□□□□□ -1.01
TMC1-204ENST00000486417 NEUROD6Q96NK8 337 aa8.71□□□□□ -1.01
TMC1-204ENST00000486417 DNAJC2Q99543 621 aaKnown RBP8.71□□□□□ -1.01
TMC1-204ENST00000486417 QTRT2Q9H974 415 aaKnown RBP8.71□□□□□ -1.01
TMC1-204ENST00000486417 CEP126Q9P2H0 1117 aa8.71□□□□□ -1.01
TMC1-204ENST00000486417 AKAP11Q9UKA4 1901 aa8.71□□□□□ -1.02
TMC1-204ENST00000486417 DOCK2Q92608 1830 aa8.71□□□□□ -1.02
TMC1-204ENST00000486417 A0A0D9SFI3 127 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 FAM177BA6PVY3 158 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 RPS6KA4O75676 772 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 TIMM10P62072 90 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 ADGRD1Q6QNK2 874 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.7□□□□□ -1.02
TMC1-204ENST00000486417 EDC3Q96F86 508 aaKnown RBP8.7□□□□□ -1.02
TMC1-204ENST00000486417 FAM227BQ96M60 508 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 AKAP2Q9Y2D5 859 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 RIPOR2Q9Y4F9 1068 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 CCDC171Q6TFL3 1326 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 HMGB1P09429 215 aaKnown RBP8.7□□□□□ -1.02
TMC1-204ENST00000486417 HCLS1P14317 486 aaPredicted RBP8.7□□□□□ -1.02
TMC1-204ENST00000486417 HSP90B1P14625 803 aaKnown RBP8.7□□□□□ -1.02
TMC1-204ENST00000486417 DDIT3P35638 169 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 METTL24Q5JXM2 366 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 LDHAL6AQ6ZMR3 332 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 KIAA1211Q6ZU35 1233 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 LAPTM4BQ86VI4 370 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 VGLL2Q8N8G2 317 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 RETREG2Q8NC44 543 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 CNNM1Q9NRU3 951 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 NARFQ9UHQ1 456 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 MTMR7Q9Y216 660 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 NDUFB9Q9Y6M9 179 aa8.7□□□□□ -1.02
TMC1-204ENST00000486417 TNS1Q9HBL0 1735 aaKnown RBP8.69□□□□□ -1.02
TMC1-204ENST00000486417 TAF1P21675 1872 aa8.69□□□□□ -1.02
TMC1-204ENST00000486417 MYO5AQ9Y4I1 1855 aaKnown RBP8.69□□□□□ -1.02
TMC1-204ENST00000486417 HRO43593 1189 aa8.69□□□□□ -1.02
TMC1-204ENST00000486417 IFIT1P09914 478 aaKnown RBP8.69□□□□□ -1.02
TMC1-204ENST00000486417 CDK11BP21127 795 aaKnown RBP8.69□□□□□ -1.02
TMC1-204ENST00000486417 ADORA1P30542 326 aa8.69□□□□□ -1.02
TMC1-204ENST00000486417 PTH1RQ03431 593 aa8.69□□□□□ -1.02
TMC1-204ENST00000486417 NFKBIBQ15653 356 aa8.69□□□□□ -1.02
TMC1-204ENST00000486417 ATP2B3Q16720 1220 aa8.69□□□□□ -1.02
TMC1-204ENST00000486417 USPL1Q5W0Q7 1092 aa8.69□□□□□ -1.02
TMC1-204ENST00000486417 SMIM5Q71RC9 77 aa8.69□□□□□ -1.02
TMC1-204ENST00000486417 DDX46Q7L014 1031 aaKnown RBP8.69□□□□□ -1.02
TMC1-204ENST00000486417 KBTBD3Q8NAB2 608 aa8.69□□□□□ -1.02
TMC1-204ENST00000486417 XAGE2Q96GT9 111 aa8.69□□□□□ -1.02
TMC1-204ENST00000486417 NBPF3Q9H094 633 aa8.69□□□□□ -1.02
TMC1-204ENST00000486417 PAG1Q9NWQ8 432 aa8.69□□□□□ -1.02
TMC1-204ENST00000486417 CHMP5Q9NZZ3 219 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms