RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 BCAMP50895 628 aa17.19■□□□□ 0.34
SCAF4-206ENST00000485790 IFNL1Q8IU54 200 aa17.19■□□□□ 0.34
SCAF4-206ENST00000485790 CDCA7LQ96GN5 454 aa17.19■□□□□ 0.34
SCAF4-206ENST00000485790 WNK4Q96J92 1243 aa17.19■□□□□ 0.34
SCAF4-206ENST00000485790 API5Q9BZZ5 524 aaKnown RBP17.19■□□□□ 0.34
SCAF4-206ENST00000485790 GNL3LQ9NVN8 582 aaKnown RBP17.19■□□□□ 0.34
SCAF4-206ENST00000485790 FZD1Q9UP38 647 aa17.19■□□□□ 0.34
SCAF4-206ENST00000485790 IQSEC3Q9UPP2 1182 aaPredicted RBP17.19■□□□□ 0.34
SCAF4-206ENST00000485790 TCP10L2B9ZVM9 353 aa17.18■□□□□ 0.34
SCAF4-206ENST00000485790 SLC5A1P13866 664 aa17.18■□□□□ 0.34
SCAF4-206ENST00000485790 LPIN2Q92539 896 aa17.18■□□□□ 0.34
SCAF4-206ENST00000485790 CLMNQ96JQ2 1002 aa17.18■□□□□ 0.34
SCAF4-206ENST00000485790 FBXO3Q9UK99 471 aa17.18■□□□□ 0.34
SCAF4-206ENST00000485790 MAST3O60307 1309 aa17.18■□□□□ 0.34
SCAF4-206ENST00000485790 MYH3P11055 1940 aa17.17■□□□□ 0.34
SCAF4-206ENST00000485790 CACNA1FO60840 1977 aa17.17■□□□□ 0.34
SCAF4-206ENST00000485790 WDHD1O75717 1129 aaPredicted RBP17.17■□□□□ 0.34
SCAF4-206ENST00000485790 MAP3K9P80192 1104 aa17.17■□□□□ 0.34
SCAF4-206ENST00000485790 TRMT2AQ8IZ69 625 aaKnown RBP17.17■□□□□ 0.34
SCAF4-206ENST00000485790 KLHDC4Q8TBB5 520 aa17.17■□□□□ 0.34
SCAF4-206ENST00000485790 WDR66Q8TBY9 1149 aa17.17■□□□□ 0.34
SCAF4-206ENST00000485790 CEP126Q9P2H0 1117 aa17.17■□□□□ 0.34
SCAF4-206ENST00000485790 NOB1Q9ULX3 412 aaKnown RBP17.17■□□□□ 0.34
SCAF4-206ENST00000485790 HPS5Q9UPZ3 1129 aa17.17■□□□□ 0.34
SCAF4-206ENST00000485790 KIF16BQ96L93 1317 aa17.17■□□□□ 0.34
SCAF4-206ENST00000485790 VGLL2Q8N8G2 317 aa17.16■□□□□ 0.34
SCAF4-206ENST00000485790 CSADQ9Y600 493 aa17.16■□□□□ 0.34
SCAF4-206ENST00000485790 CCER2I3L3R5 266 aa17.15■□□□□ 0.34
SCAF4-206ENST00000485790 ARHGEF6Q15052 776 aa17.15■□□□□ 0.34
SCAF4-206ENST00000485790 FKBP1CQ5VVH2 108 aa17.15■□□□□ 0.34
SCAF4-206ENST00000485790 FBXO46Q6PJ61 603 aaPredicted RBP17.15■□□□□ 0.34
SCAF4-206ENST00000485790 HHIPL2Q6UWX4 724 aa17.15■□□□□ 0.34
SCAF4-206ENST00000485790 ZDHHC15Q96MV8 337 aa17.15■□□□□ 0.34
SCAF4-206ENST00000485790 CIAO1O76071 339 aa17.14■□□□□ 0.33
SCAF4-206ENST00000485790 FGFR2P21802 821 aa17.14■□□□□ 0.33
SCAF4-206ENST00000485790 FAM83AQ86UY5 434 aa17.14■□□□□ 0.33
SCAF4-206ENST00000485790 TMEM39BQ9GZU3 492 aa17.14■□□□□ 0.33
SCAF4-206ENST00000485790 ELP3Q9H9T3 547 aa17.14■□□□□ 0.33
SCAF4-206ENST00000485790 CASP8AP2Q9UKL3 1982 aa17.14■□□□□ 0.33
SCAF4-206ENST00000485790 PSME4Q14997 1843 aa17.14■□□□□ 0.33
SCAF4-206ENST00000485790 IPO8O15397 1037 aaKnown RBP17.13■□□□□ 0.33
SCAF4-206ENST00000485790 IL15P40933 162 aaPredicted RBP17.13■□□□□ 0.33
SCAF4-206ENST00000485790 RFX5P48382 616 aaPredicted RBP17.13■□□□□ 0.33
SCAF4-206ENST00000485790 GTF2A2P52657 109 aa17.13■□□□□ 0.33
SCAF4-206ENST00000485790 SOX10P56693 466 aa17.13■□□□□ 0.33
SCAF4-206ENST00000485790 OPTNQ96CV9 577 aa17.13■□□□□ 0.33
SCAF4-206ENST00000485790 ERO1AQ96HE7 468 aa17.13■□□□□ 0.33
SCAF4-206ENST00000485790 TEPSINQ96N21 525 aa17.13■□□□□ 0.33
SCAF4-206ENST00000485790 AOX1Q06278 1338 aa17.13■□□□□ 0.33
SCAF4-206ENST00000485790 TESPA1A2RU30 521 aaPredicted RBP17.12■□□□□ 0.33
SCAF4-206ENST00000485790 GRIK5Q16478 980 aa17.12■□□□□ 0.33
SCAF4-206ENST00000485790 DCAF15Q66K64 600 aa17.12■□□□□ 0.33
SCAF4-206ENST00000485790 ARHGAP45Q92619 1136 aa17.12■□□□□ 0.33
SCAF4-206ENST00000485790 SIL1Q9H173 461 aa17.12■□□□□ 0.33
SCAF4-206ENST00000485790 R3HDMLQ9H3Y0 253 aa17.12■□□□□ 0.33
SCAF4-206ENST00000485790 IGF2BP3O00425 579 aaKnown RBP eCLIP17.11■□□□□ 0.33
SCAF4-206ENST00000485790 GNAI3P08754 354 aa17.11■□□□□ 0.33
SCAF4-206ENST00000485790 ATP2B3Q16720 1220 aa17.11■□□□□ 0.33
SCAF4-206ENST00000485790 APOBEC3HQ6NTF7 200 aaKnown RBP17.11■□□□□ 0.33
SCAF4-206ENST00000485790 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.11■□□□□ 0.33
SCAF4-206ENST00000485790 ATG9AQ7Z3C6 839 aa17.11■□□□□ 0.33
SCAF4-206ENST00000485790 SPEF2Q9C093 1822 aa17.1■□□□□ 0.33
SCAF4-206ENST00000485790 SEMA3EO15041 775 aa17.1■□□□□ 0.33
SCAF4-206ENST00000485790 SP3Q02447 781 aa17.1■□□□□ 0.33
SCAF4-206ENST00000485790 INTS3Q68E01 1043 aaKnown RBP17.1■□□□□ 0.33
SCAF4-206ENST00000485790 ZFYVE28Q9HCC9 887 aa17.1■□□□□ 0.33
SCAF4-206ENST00000485790 DENND2AQ9ULE3 1009 aa17.1■□□□□ 0.33
SCAF4-206ENST00000485790 TRIM17Q9Y577 477 aa17.1■□□□□ 0.33
SCAF4-206ENST00000485790 LDHBP07195 334 aaKnown RBP17.09■□□□□ 0.33
SCAF4-206ENST00000485790 RARSP54136 660 aaKnown RBP17.09■□□□□ 0.33
SCAF4-206ENST00000485790 CACNB3P54284 484 aa17.09■□□□□ 0.33
SCAF4-206ENST00000485790 VGLL4Q14135 290 aa17.09■□□□□ 0.33
SCAF4-206ENST00000485790 ZGPATQ8N5A5 531 aaKnown RBP17.09■□□□□ 0.33
SCAF4-206ENST00000485790 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.09■□□□□ 0.33
SCAF4-206ENST00000485790 AKAP2Q9Y2D5 859 aa17.09■□□□□ 0.33
SCAF4-206ENST00000485790 LRRFIP2Q9Y608 721 aaKnown RBP17.09■□□□□ 0.33
SCAF4-206ENST00000485790 CCL15-CCL14A0A0B4J2E2 113 aa17.08■□□□□ 0.32
SCAF4-206ENST00000485790 CETPP11597 493 aa17.08■□□□□ 0.32
SCAF4-206ENST00000485790 GJA5P36382 358 aa17.08■□□□□ 0.32
SCAF4-206ENST00000485790 CRHR2Q13324 411 aa17.08■□□□□ 0.32
SCAF4-206ENST00000485790 CCL15Q16663 113 aa17.08■□□□□ 0.32
SCAF4-206ENST00000485790 ERO1BQ86YB8 467 aa17.08■□□□□ 0.32
SCAF4-206ENST00000485790 SLF2Q8IX21 1173 aa17.08■□□□□ 0.32
SCAF4-206ENST00000485790 FAM151AQ8WW52 585 aa17.08■□□□□ 0.32
SCAF4-206ENST00000485790 OTUD5Q96G74 571 aa17.08■□□□□ 0.32
SCAF4-206ENST00000485790 MS4A4AQ96JQ5 239 aa17.08■□□□□ 0.32
SCAF4-206ENST00000485790 PTPN18Q99952 460 aa17.08■□□□□ 0.32
SCAF4-206ENST00000485790 EFCC1Q9HA90 598 aa17.08■□□□□ 0.32
SCAF4-206ENST00000485790 COPRSQ9NQ92 184 aa17.08■□□□□ 0.32
SCAF4-206ENST00000485790 PIAS4Q8N2W9 510 aaPredicted RBP17.07■□□□□ 0.32
SCAF4-206ENST00000485790 WRNIP1Q96S55 665 aa17.07■□□□□ 0.32
SCAF4-206ENST00000485790 ZNF341Q9BYN7 854 aa17.07■□□□□ 0.32
SCAF4-206ENST00000485790 USP40Q9NVE5 1235 aa17.07■□□□□ 0.32
SCAF4-206ENST00000485790 SNAPC2Q13487 334 aa17.06■□□□□ 0.32
SCAF4-206ENST00000485790 TAF1CQ15572 869 aaPredicted RBP17.06■□□□□ 0.32
SCAF4-206ENST00000485790 SPTY2D1Q68D10 685 aaPredicted RBP17.06■□□□□ 0.32
SCAF4-206ENST00000485790 OTOP1Q7RTM1 612 aa17.06■□□□□ 0.32
SCAF4-206ENST00000485790 CDAN1Q8IWY9 1227 aa17.06■□□□□ 0.32
SCAF4-206ENST00000485790 ZKSCAN4Q969J2 545 aaPredicted RBP17.06■□□□□ 0.32
SCAF4-206ENST00000485790 SSC5DA1L4H1 1573 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms