RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 EGFLAMQ63HQ2 1017 aa5.86□□□□□ -1.47
RTN4-213ENST00000485749 DHX32Q7L7V1 743 aaKnown RBP5.86□□□□□ -1.47
RTN4-213ENST00000485749 USP48Q86UV5 1035 aa5.86□□□□□ -1.47
RTN4-213ENST00000485749 ATCAYQ86WG3 371 aa5.86□□□□□ -1.47
RTN4-213ENST00000485749 ETFBKMTQ8IXQ9 262 aa5.86□□□□□ -1.47
RTN4-213ENST00000485749 TRPM4Q8TD43 1214 aa5.86□□□□□ -1.47
RTN4-213ENST00000485749 WFDC12Q8WWY7 111 aa5.86□□□□□ -1.47
RTN4-213ENST00000485749 SECISBP2LQ93073 1101 aaKnown RBP5.86□□□□□ -1.47
RTN4-213ENST00000485749 NBPF4Q96M43 638 aa5.86□□□□□ -1.47
RTN4-213ENST00000485749 SLC52A1Q9NWF4 448 aa5.86□□□□□ -1.47
RTN4-213ENST00000485749 SBNO2Q9Y2G9 1366 aa5.85□□□□□ -1.47
RTN4-213ENST00000485749 HYAL3O43820 417 aaPredicted RBP5.85□□□□□ -1.47
RTN4-213ENST00000485749 CPNE3O75131 537 aaKnown RBP5.85□□□□□ -1.47
RTN4-213ENST00000485749 STK10O94804 968 aaKnown RBP5.85□□□□□ -1.47
RTN4-213ENST00000485749 IGBP1P78318 339 aa5.85□□□□□ -1.47
RTN4-213ENST00000485749 GPLD1P80108 840 aa5.85□□□□□ -1.47
RTN4-213ENST00000485749 FAM26DQ5JW98 314 aa5.85□□□□□ -1.47
RTN4-213ENST00000485749 MAP4K3Q8IVH8 894 aa5.85□□□□□ -1.47
RTN4-213ENST00000485749 SMC5Q8IY18 1101 aa5.85□□□□□ -1.47
RTN4-213ENST00000485749 CACTIN-AS1Q8N1I8 211 aa5.85□□□□□ -1.47
RTN4-213ENST00000485749 TTC16Q8NEE8 873 aa5.85□□□□□ -1.47
RTN4-213ENST00000485749 IFT43Q96FT9 208 aa5.85□□□□□ -1.47
RTN4-213ENST00000485749 SSBP4Q9BWG4 385 aaPredicted RBP5.85□□□□□ -1.47
RTN4-213ENST00000485749 KRTAP9-2Q9BYQ4 174 aa5.85□□□□□ -1.47
RTN4-213ENST00000485749 SRCIN1Q9C0H9 1055 aa5.85□□□□□ -1.47
RTN4-213ENST00000485749 OSBPL2Q9H1P3 480 aa5.85□□□□□ -1.47
RTN4-213ENST00000485749 NAGPAQ9UK23 515 aa5.85□□□□□ -1.47
RTN4-213ENST00000485749 GSC2O15499 205 aa5.84□□□□□ -1.47
RTN4-213ENST00000485749 EIF3JO75822 258 aaKnown RBP5.84□□□□□ -1.47
RTN4-213ENST00000485749 FGRP09769 529 aa5.84□□□□□ -1.47
RTN4-213ENST00000485749 RARAP10276 462 aa5.84□□□□□ -1.47
RTN4-213ENST00000485749 IDH3AP50213 366 aa5.84□□□□□ -1.47
RTN4-213ENST00000485749 NFE2L2Q16236 605 aa5.84□□□□□ -1.47
RTN4-213ENST00000485749 ZNF394Q53GI3 561 aa5.84□□□□□ -1.47
RTN4-213ENST00000485749 ZNF746Q6NUN9 644 aaPredicted RBP5.84□□□□□ -1.47
RTN4-213ENST00000485749 ZNF662Q6ZS27 426 aa5.84□□□□□ -1.47
RTN4-213ENST00000485749 FTSJ3Q8IY81 847 aaKnown RBP5.84□□□□□ -1.47
RTN4-213ENST00000485749 LPIN3Q9BQK8 851 aa5.84□□□□□ -1.47
RTN4-213ENST00000485749 C12orf49Q9H741 205 aa5.84□□□□□ -1.47
RTN4-213ENST00000485749 ZSWIM4Q9H7M6 989 aa5.84□□□□□ -1.47
RTN4-213ENST00000485749 KLK14Q9P0G3 267 aa5.84□□□□□ -1.47
RTN4-213ENST00000485749 GGT7Q9UJ14 662 aa5.84□□□□□ -1.47
RTN4-213ENST00000485749 hCG_2014768A0A024R1R8 64 aa5.83□□□□□ -1.48
RTN4-213ENST00000485749 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.83□□□□□ -1.48
RTN4-213ENST00000485749 CREB3O43889 395 aa5.83□□□□□ -1.48
RTN4-213ENST00000485749 ATF4P18848 351 aaPredicted RBP5.83□□□□□ -1.48
RTN4-213ENST00000485749 LIG1P18858 919 aa5.83□□□□□ -1.48
RTN4-213ENST00000485749 IBSPP21815 317 aaPredicted RBP5.83□□□□□ -1.48
RTN4-213ENST00000485749 IREB2P48200 963 aaKnown RBP5.83□□□□□ -1.48
RTN4-213ENST00000485749 NRLP54845 237 aa5.83□□□□□ -1.48
RTN4-213ENST00000485749 TAF1CQ15572 869 aaPredicted RBP5.83□□□□□ -1.48
RTN4-213ENST00000485749 HSP90AB2PQ58FF8 381 aa5.83□□□□□ -1.48
RTN4-213ENST00000485749 ZFYVE27Q5T4F4 411 aa5.83□□□□□ -1.48
RTN4-213ENST00000485749 XKR5Q6UX68 686 aa5.83□□□□□ -1.48
RTN4-213ENST00000485749 KRBA2Q6ZNG9 492 aa5.83□□□□□ -1.48
RTN4-213ENST00000485749 ILDR2Q71H61 639 aa5.83□□□□□ -1.48
RTN4-213ENST00000485749 MCF2L2Q86YR7 1114 aa5.83□□□□□ -1.48
RTN4-213ENST00000485749 NME8Q8N427 588 aa5.83□□□□□ -1.48
RTN4-213ENST00000485749 RASGRP4Q8TDF6 673 aa5.83□□□□□ -1.48
RTN4-213ENST00000485749 MKL1Q969V6 931 aa5.83□□□□□ -1.48
RTN4-213ENST00000485749 BRINP2Q9C0B6 783 aa5.83□□□□□ -1.48
RTN4-213ENST00000485749 MRPL18Q9H0U6 180 aaKnown RBP5.83□□□□□ -1.48
RTN4-213ENST00000485749 MAP4K4O95819 1239 aaPredicted RBP5.82□□□□□ -1.48
RTN4-213ENST00000485749 GHRHP01286 108 aa5.82□□□□□ -1.48
RTN4-213ENST00000485749 PSAPP07602 524 aa5.82□□□□□ -1.48
RTN4-213ENST00000485749 EIF2AK2P19525 551 aaKnown RBP5.82□□□□□ -1.48
RTN4-213ENST00000485749 INPP5BP32019 993 aa5.82□□□□□ -1.48
RTN4-213ENST00000485749 ORC1Q13415 861 aa5.82□□□□□ -1.48
RTN4-213ENST00000485749 PERM1Q5SV97 790 aa5.82□□□□□ -1.48
RTN4-213ENST00000485749 PRR23CQ6ZRP0 262 aa5.82□□□□□ -1.48
RTN4-213ENST00000485749 PMFBP1Q8TBY8 1022 aa5.82□□□□□ -1.48
RTN4-213ENST00000485749 NUDT16Q96DE0 195 aaKnown RBP5.82□□□□□ -1.48
RTN4-213ENST00000485749 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.82□□□□□ -1.48
RTN4-213ENST00000485749 MUC3BQ9H195 1237 aa5.82□□□□□ -1.48
RTN4-213ENST00000485749 PIF1Q9H611 641 aa5.82□□□□□ -1.48
RTN4-213ENST00000485749 AKTIPQ9H8T0 292 aa5.82□□□□□ -1.48
RTN4-213ENST00000485749 FAM8A1Q9UBU6 413 aa5.82□□□□□ -1.48
RTN4-213ENST00000485749 DMGDHQ9UI17 866 aaKnown RBP5.82□□□□□ -1.48
RTN4-213ENST00000485749 KRTAP9-6A0A140TA67 174 aa5.81□□□□□ -1.48
RTN4-213ENST00000485749 HSD3B2P26439 372 aa5.81□□□□□ -1.48
RTN4-213ENST00000485749 NOS3P29474 1203 aa5.81□□□□□ -1.48
RTN4-213ENST00000485749 PLAURQ03405 335 aa5.81□□□□□ -1.48
RTN4-213ENST00000485749 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.81□□□□□ -1.48
RTN4-213ENST00000485749 ERMP1Q7Z2K6 904 aa5.81□□□□□ -1.48
RTN4-213ENST00000485749 KRT25Q7Z3Z0 450 aa5.81□□□□□ -1.48
RTN4-213ENST00000485749 TREML1Q86YW5 311 aa5.81□□□□□ -1.48
RTN4-213ENST00000485749 SEC16BQ96JE7 1060 aa5.81□□□□□ -1.48
RTN4-213ENST00000485749 MTA3Q9BTC8 594 aa5.81□□□□□ -1.48
RTN4-213ENST00000485749 SMG9Q9H0W8 520 aaKnown RBP5.81□□□□□ -1.48
RTN4-213ENST00000485749 GGNBP2Q9H3C7 697 aa5.81□□□□□ -1.48
RTN4-213ENST00000485749 TMX1Q9H3N1 280 aa5.81□□□□□ -1.48
RTN4-213ENST00000485749 PCMTD2Q9NV79 361 aa5.81□□□□□ -1.48
RTN4-213ENST00000485749 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.81□□□□□ -1.48
RTN4-213ENST00000485749 BCS1LQ9Y276 419 aa5.81□□□□□ -1.48
RTN4-213ENST00000485749 PCDHGB7Q9Y5F8 929 aa5.81□□□□□ -1.48
RTN4-213ENST00000485749 BTBD11A6QL63 1104 aa5.8□□□□□ -1.48
RTN4-213ENST00000485749 OPLAHO14841 1288 aa5.8□□□□□ -1.48
RTN4-213ENST00000485749 CLGNO14967 610 aa5.8□□□□□ -1.48
RTN4-213ENST00000485749 PAX4O43316 350 aa5.8□□□□□ -1.48
RTN4-213ENST00000485749 MICAL2O94851 1124 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms