RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 NLRP2Q9NX02 1062 aa6.41□□□□□ -1.38
TM9SF3-205ENST00000485093 NOP53Q9NZM5 478 aaKnown RBP6.41□□□□□ -1.38
TM9SF3-205ENST00000485093 H3BRJ5 948 aa6.4□□□□□ -1.38
TM9SF3-205ENST00000485093 FSCN2O14926 492 aa6.4□□□□□ -1.38
TM9SF3-205ENST00000485093 B3GALT4O96024 378 aa6.4□□□□□ -1.38
TM9SF3-205ENST00000485093 VAMP1P23763 118 aa6.4□□□□□ -1.38
TM9SF3-205ENST00000485093 TMEM130Q8N3G9 435 aa6.4□□□□□ -1.38
TM9SF3-205ENST00000485093 LACRTQ9GZZ8 138 aa6.4□□□□□ -1.38
TM9SF3-205ENST00000485093 CLEC4MQ9H2X3 399 aaPredicted RBP6.4□□□□□ -1.38
TM9SF3-205ENST00000485093 CACNA2D2Q9NY47 1150 aa6.4□□□□□ -1.38
TM9SF3-205ENST00000485093 PDS5BQ9NTI5 1447 aa6.4□□□□□ -1.39
TM9SF3-205ENST00000485093 PRXQ9BXM0 1461 aa6.4□□□□□ -1.39
TM9SF3-205ENST00000485093 RAD54L2Q9Y4B4 1467 aa6.4□□□□□ -1.39
TM9SF3-205ENST00000485093 LINC01387J3KSC0 135 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 SPATA31C1P0DKV0 1188 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 ELNP15502 786 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 PIP4K2BP78356 416 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 ATP2B2Q01814 1243 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 TRAPPC3LQ5T215 181 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 IGF2-ASQ6U949 168 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 PODNQ7Z5L7 613 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 KLHL23Q8NBE8 558 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 LENG1Q96BZ8 264 aaPredicted RBP6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 BCL2L13Q9BXK5 485 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 ZFYVE1Q9HBF4 777 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 KCNK4Q9NYG8 393 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 FAM8A1Q9UBU6 413 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 SPG7Q9UQ90 795 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 CARMIL1Q5VZK9 1371 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 USP31Q70CQ4 1352 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 TOPBP1Q92547 1522 aa6.39□□□□□ -1.39
TM9SF3-205ENST00000485093 SPDYE3A6NKU9 549 aa6.38□□□□□ -1.39
TM9SF3-205ENST00000485093 ADAM11O75078 769 aa6.38□□□□□ -1.39
TM9SF3-205ENST00000485093 GADD45BO75293 160 aaPredicted RBP6.38□□□□□ -1.39
TM9SF3-205ENST00000485093 TRIM28Q13263 835 aaKnown RBP6.38□□□□□ -1.39
TM9SF3-205ENST00000485093 KLHDC7BQ96G42 594 aa6.38□□□□□ -1.39
TM9SF3-205ENST00000485093 SEC31BQ9NQW1 1179 aa6.38□□□□□ -1.39
TM9SF3-205ENST00000485093 PODXL2Q9NZ53 605 aa6.38□□□□□ -1.39
TM9SF3-205ENST00000485093 PPM1HQ9ULR3 514 aa6.38□□□□□ -1.39
TM9SF3-205ENST00000485093 CCDC9Q9Y3X0 531 aaKnown RBP6.38□□□□□ -1.39
TM9SF3-205ENST00000485093 LAMC3Q9Y6N6 1575 aa6.38□□□□□ -1.39
TM9SF3-205ENST00000485093 DNMBPQ6XZF7 1577 aa6.37□□□□□ -1.39
TM9SF3-205ENST00000485093 UNCXA6NJT0 531 aa6.37□□□□□ -1.39
TM9SF3-205ENST00000485093 PCDH1Q08174 1060 aa6.37□□□□□ -1.39
TM9SF3-205ENST00000485093 FOXD4L6Q3SYB3 417 aaPredicted RBP6.37□□□□□ -1.39
TM9SF3-205ENST00000485093 FOXD4L3Q6VB84 417 aaPredicted RBP6.37□□□□□ -1.39
TM9SF3-205ENST00000485093 TRIM56Q9BRZ2 755 aaKnown RBP6.37□□□□□ -1.39
TM9SF3-205ENST00000485093 FAM229AH3BQW9 127 aa6.36□□□□□ -1.39
TM9SF3-205ENST00000485093 FURINP09958 794 aa6.36□□□□□ -1.39
TM9SF3-205ENST00000485093 GSTT1P30711 240 aa6.36□□□□□ -1.39
TM9SF3-205ENST00000485093 GRIK4Q16099 956 aa6.36□□□□□ -1.39
TM9SF3-205ENST00000485093 LCE1DQ5T752 114 aa6.36□□□□□ -1.39
TM9SF3-205ENST00000485093 Q6ZS46 218 aa6.36□□□□□ -1.39
TM9SF3-205ENST00000485093 GIPC2Q8TF65 315 aa6.36□□□□□ -1.39
TM9SF3-205ENST00000485093 FOXD4L4Q8WXT5 416 aaPredicted RBP6.36□□□□□ -1.39
TM9SF3-205ENST00000485093 NECAB3Q96P71 396 aaPredicted RBP6.36□□□□□ -1.39
TM9SF3-205ENST00000485093 PPP4R2Q9NY27 417 aa6.36□□□□□ -1.39
TM9SF3-205ENST00000485093 URB2Q14146 1524 aaKnown RBP6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 ERICH3Q5RHP9 1530 aa6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 POLA1P09884 1462 aaPredicted RBP6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 TDRD9Q8NDG6 1382 aaKnown RBP6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 MEGF11A6BM72 1044 aa6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 ENC1O14682 589 aa6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 BMP6P22004 513 aa6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 CD68P34810 354 aaPredicted RBP6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 ZEB1P37275 1124 aaPredicted RBP6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 ST13P50502 369 aaKnown RBP6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 FCGRTP55899 365 aa6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 C19orf57Q0VDD7 668 aa6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 IKBKEQ14164 716 aa6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 ADGRE1Q14246 886 aa6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 ZNF326Q5BKZ1 582 aaKnown RBP6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 PDZD3Q86UT5 571 aa6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 CD163Q86VB7 1156 aa6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 ASAP3Q8TDY4 903 aa6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 FAM161BQ96MY7 647 aa6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 SSBP4Q9BWG4 385 aaPredicted RBP6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 KIAA1522Q9P206 1035 aaPredicted RBP6.35□□□□□ -1.39
TM9SF3-205ENST00000485093 VPS8Q8N3P4 1428 aa6.34□□□□□ -1.39
TM9SF3-205ENST00000485093 SYNGAP1Q96PV0 1343 aa6.34□□□□□ -1.39
TM9SF3-205ENST00000485093 EIF4EBP3O60516 100 aaPredicted RBP6.34□□□□□ -1.39
TM9SF3-205ENST00000485093 DLGAP3O95886 979 aa6.34□□□□□ -1.39
TM9SF3-205ENST00000485093 USP17L7P0C7H9 530 aa6.34□□□□□ -1.39
TM9SF3-205ENST00000485093 EIF4BP23588 611 aaKnown RBP6.34□□□□□ -1.39
TM9SF3-205ENST00000485093 RAC1P63000 192 aa6.34□□□□□ -1.39
TM9SF3-205ENST00000485093 TXNDC11Q6PKC3 985 aa6.34□□□□□ -1.39
TM9SF3-205ENST00000485093 SHISA2Q6UWI4 295 aa6.34□□□□□ -1.39
TM9SF3-205ENST00000485093 KIAA1211Q6ZU35 1233 aa6.34□□□□□ -1.39
TM9SF3-205ENST00000485093 C9orf172C9J069 976 aa6.33□□□□□ -1.4
TM9SF3-205ENST00000485093 DDX3YO15523 660 aaKnown RBP6.33□□□□□ -1.4
TM9SF3-205ENST00000485093 SORBS3O60504 671 aa6.33□□□□□ -1.4
TM9SF3-205ENST00000485093 ITGB7P26010 798 aa6.33□□□□□ -1.4
TM9SF3-205ENST00000485093 CHRNA4P43681 627 aa6.33□□□□□ -1.4
TM9SF3-205ENST00000485093 CABP4P57796 275 aa6.33□□□□□ -1.4
TM9SF3-205ENST00000485093 ZNF252P-AS1Q0IIN9 211 aa6.33□□□□□ -1.4
TM9SF3-205ENST00000485093 PRRT3Q5FWE3 981 aa6.33□□□□□ -1.4
TM9SF3-205ENST00000485093 DTHD1Q6ZMT9 781 aa6.33□□□□□ -1.4
TM9SF3-205ENST00000485093 DCAF11Q8TEB1 546 aa6.33□□□□□ -1.4
TM9SF3-205ENST00000485093 ABCA10Q8WWZ4 1543 aa6.33□□□□□ -1.4
TM9SF3-205ENST00000485093 C1QTNF9BB2RNN3 333 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms