RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 JAK2O60674 1132 aa8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 NTSR2O95665 410 aa8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 PDE6AP16499 860 aa8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 SCN7AQ01118 1682 aa8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 APOBRQ0VD83 1088 aa8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 ITPK1Q13572 414 aa8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 SLFNL1Q499Z3 407 aa8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 SLC9C2Q5TAH2 1124 aa8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 SPATA5Q8NB90 893 aa8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 LEO1Q8WVC0 666 aaPredicted RBP8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 SPATA32Q96LK8 384 aa8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 ZNF396Q96N95 335 aaPredicted RBP8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 FUCA2Q9BTY2 467 aa8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 CNTNAP4Q9C0A0 1308 aa8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 PUS7LQ9H0K6 701 aaKnown RBP8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 CCDC39Q9UFE4 941 aa8.67□□□□□ -1.02
SHROOM3-206ENST00000484236 CASZ1Q86V15 1759 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 TIAM2Q8IVF5 1701 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 ZNF532Q9HCE3 1301 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 TCRBV5S4A2TA0A5A2 114 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 PATL2C9JE40 543 aaKnown RBP8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 PRC1O43663 620 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 CTDNEP1O95476 244 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 CAVIN2O95810 425 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 CCDC192P0DO97 292 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 GNAT2P19087 354 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 MSNP26038 577 aaKnown RBP8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 PHKA1P46020 1223 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 SF3B3Q15393 1217 aaKnown RBP8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 VPS72Q15906 364 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 RC3H1Q5TC82 1133 aaKnown RBP8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 TTLL5Q6EMB2 1281 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 FERMT3Q86UX7 667 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 TMEM87BQ96K49 555 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 MTA3Q9BTC8 594 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 LRRC2Q9BYS8 371 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 NUP62CLQ9H1M0 184 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 PIH1D3Q9NQM4 214 aaKnown RBP8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 RCOR1Q9UKL0 485 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 NOL7Q9UMY1 257 aaKnown RBP8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 NIP7Q9Y221 180 aaKnown RBP eCLIP8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 C4AP0C0L4 1744 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 C4BP0C0L5 1744 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 COL24A1Q17RW2 1714 aa8.66□□□□□ -1.02
SHROOM3-206ENST00000484236 PNPLA7Q6ZV29 1317 aa8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 IGSF3O75054 1194 aa8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 IDH1O75874 414 aaKnown RBP8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 CDKL5O76039 1030 aa8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 HCLS1P14317 486 aaPredicted RBP8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 MAP3K11Q16584 847 aa8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 SLC10A5Q5PT55 438 aa8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 TMED8Q6PL24 325 aaPredicted RBP8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 PI16Q6UXB8 463 aa8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 RBM43Q6ZSC3 357 aaKnown RBP8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 AIDAQ96BJ3 306 aa8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 DDX11Q96FC9 970 aa8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 ACSBG1Q96GR2 724 aa8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 STRBPQ96SI9 672 aaKnown RBP8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 GNL3LQ9NVN8 582 aaKnown RBP8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 ANGEL1Q9UNK9 670 aaKnown RBP8.65□□□□□ -1.02
SHROOM3-206ENST00000484236 NHSQ6T4R5 1651 aa8.65□□□□□ -1.03
SHROOM3-206ENST00000484236 A0A0G2JLW4 131 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 KLF18A0A0U1RQI7 1052 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 NUTM2BA6NNL0 878 aaPredicted RBP8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 NUTM2EB1AL46 878 aaPredicted RBP8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 CTAGE5O15320 804 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 ANTXR2P58335 489 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 HAND2P61296 217 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 UBE4AQ14139 1066 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 CPLX2Q6PUV4 134 aaKnown RBP8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 BRAPQ7Z569 592 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 SGMS1Q86VZ5 419 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 NUTM2AQ8IVF1 878 aaPredicted RBP8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 RNF214Q8ND24 703 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 NACAP1Q9BZK3 213 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 KRT23Q9C075 422 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 NYXQ9GZU5 481 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 TNMDQ9H2S6 317 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 CLSTN2Q9H4D0 955 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 CNNM2Q9H8M5 875 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 WWC3Q9ULE0 1092 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 BCL9LQ86UU0 1499 aa8.64□□□□□ -1.03
SHROOM3-206ENST00000484236 THSD7AQ9UPZ6 1657 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 ZNF804BA4D1E1 1349 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 PDS5AQ29RF7 1337 aaKnown RBP8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 GOLGA8BA8MQT2 603 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 SH2B2O14492 632 aaPredicted RBP8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 CPLX1O14810 134 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 SEMA3EO15041 775 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 ZNF500O60304 480 aaPredicted RBP8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 APPP05067 770 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 TPM3P06753 285 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 ADD1P35611 737 aaKnown RBP8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 LIFRP42702 1097 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 MNX1P50219 401 aaPredicted RBP8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 RCAN1P53805 252 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 CCT2P78371 535 aaKnown RBP8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 CHRNDQ07001 517 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 RASGRF1Q13972 1273 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 FAM173BQ6P4H8 233 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms