RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CNTROBQ8N137 903 aa8.52□□□□□ -1.05
BRCA1-216ENST00000484087 VPS33BQ9H267 617 aa8.52□□□□□ -1.05
BRCA1-216ENST00000484087 UPF2Q9HAU5 1272 aaKnown RBP8.52□□□□□ -1.05
BRCA1-216ENST00000484087 ADARB2Q9NS39 739 aaKnown RBP8.52□□□□□ -1.05
BRCA1-216ENST00000484087 MKRN1Q9UHC7 482 aaKnown RBP8.52□□□□□ -1.05
BRCA1-216ENST00000484087 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-216ENST00000484087 AOX1Q06278 1338 aa8.52□□□□□ -1.05
BRCA1-216ENST00000484087 ECM29Q5VYK3 1845 aa8.52□□□□□ -1.05
BRCA1-216ENST00000484087 ADM5C9JUS6 153 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 F8W031 263 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-216ENST00000484087 GTF2IP78347 998 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 C8orf34Q49A92 452 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 CEP85Q6P2H3 762 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 RSBN1LQ6PCB5 846 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-216ENST00000484087 KIAA0825Q8IV33 1275 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 DDRGK1Q96HY6 314 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 ZNF408Q9H9D4 720 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 LEMD3Q9Y2U8 911 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 RIPOR2Q9Y4F9 1068 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 COL1A1P02452 1464 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-216ENST00000484087 USP17L3A6NCW0 530 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 USP17L4A6NCW7 530 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 STK25O00506 426 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 EIF5BO60841 1220 aaKnown RBP8.51□□□□□ -1.05
BRCA1-216ENST00000484087 SASH1O94885 1247 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 VIL1P09327 827 aaKnown RBP8.51□□□□□ -1.05
BRCA1-216ENST00000484087 PTPN12Q05209 780 aaKnown RBP8.51□□□□□ -1.05
BRCA1-216ENST00000484087 GRIK5Q16478 980 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 KIF4BQ2VIQ3 1234 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 METTL24Q5JXM2 366 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 DACT2Q5SW24 774 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 USP17L1Q7RTZ2 530 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 PNMA8AQ86V59 439 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-216ENST00000484087 CERS5Q8N5B7 392 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 DNAJC5GQ8N7S2 189 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 VGLL2Q8N8G2 317 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 LNPKQ9C0E8 428 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 ANKRD2Q9GZV1 360 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 DCTPP1Q9H773 170 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 CD209Q9NNX6 404 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 GGA3Q9NZ52 723 aa8.51□□□□□ -1.05
BRCA1-216ENST00000484087 PNMA6EA0A0J9YXQ4 647 aa8.5□□□□□ -1.05
BRCA1-216ENST00000484087 GTPBP6O43824 516 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-216ENST00000484087 GRM1Q13255 1194 aa8.5□□□□□ -1.05
BRCA1-216ENST00000484087 USP50Q70EL3 339 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-216ENST00000484087 ATG9AQ7Z3C6 839 aa8.5□□□□□ -1.05
BRCA1-216ENST00000484087 SIRT2Q8IXJ6 389 aa8.5□□□□□ -1.05
BRCA1-216ENST00000484087 PDCD7Q8N8D1 485 aaKnown RBP8.5□□□□□ -1.05
BRCA1-216ENST00000484087 GMLQ99445 158 aa8.5□□□□□ -1.05
BRCA1-216ENST00000484087 COA1Q9GZY4 146 aa8.5□□□□□ -1.05
BRCA1-216ENST00000484087 H7C1D1 291 aa8.49□□□□□ -1.05
BRCA1-216ENST00000484087 NBPF9Q3BBW0 867 aa8.49□□□□□ -1.05
BRCA1-216ENST00000484087 ANGEL2Q5VTE6 544 aaKnown RBP8.49□□□□□ -1.05
BRCA1-216ENST00000484087 PRAMEF18Q5VWM3 479 aa8.49□□□□□ -1.05
BRCA1-216ENST00000484087 TTLL5Q6EMB2 1281 aa8.49□□□□□ -1.05
BRCA1-216ENST00000484087 PODNQ7Z5L7 613 aa8.49□□□□□ -1.05
BRCA1-216ENST00000484087 USP48Q86UV5 1035 aa8.49□□□□□ -1.05
BRCA1-216ENST00000484087 IPO9Q96P70 1041 aaKnown RBP8.49□□□□□ -1.05
BRCA1-216ENST00000484087 EYA2O00167 538 aa8.48□□□□□ -1.05
BRCA1-216ENST00000484087 SRGAP3O43295 1099 aa8.48□□□□□ -1.05
BRCA1-216ENST00000484087 ADORA1P30542 326 aa8.48□□□□□ -1.05
BRCA1-216ENST00000484087 BCAMP50895 628 aa8.48□□□□□ -1.05
BRCA1-216ENST00000484087 CHAF1AQ13111 956 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-216ENST00000484087 CST9Q5W186 159 aa8.48□□□□□ -1.05
BRCA1-216ENST00000484087 ZNF804AQ7Z570 1209 aa8.48□□□□□ -1.05
BRCA1-216ENST00000484087 DPF2Q92785 391 aa8.48□□□□□ -1.05
BRCA1-216ENST00000484087 KLRG1Q96E93 195 aa8.48□□□□□ -1.05
BRCA1-216ENST00000484087 FAM84BQ96KN1 310 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-216ENST00000484087 MYOZ2Q9NPC6 264 aa8.48□□□□□ -1.05
BRCA1-216ENST00000484087 DAXXQ9UER7 740 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-216ENST00000484087 ABT1Q9ULW3 272 aaKnown RBP8.48□□□□□ -1.05
BRCA1-216ENST00000484087 FZD1Q9UP38 647 aa8.48□□□□□ -1.05
BRCA1-216ENST00000484087 ZNF609O15014 1411 aa8.48□□□□□ -1.05
BRCA1-216ENST00000484087 MYO5AQ9Y4I1 1855 aaKnown RBP8.48□□□□□ -1.05
BRCA1-216ENST00000484087 MROH5Q6ZUA9 1318 aa8.48□□□□□ -1.05
BRCA1-216ENST00000484087 TMEM88BA6NKF7 163 aa8.47□□□□□ -1.05
BRCA1-216ENST00000484087 PDE8BO95263 885 aa8.47□□□□□ -1.05
BRCA1-216ENST00000484087 CELF2O95319 508 aaKnown RBP8.47□□□□□ -1.05
BRCA1-216ENST00000484087 USP17L8P0C7I0 530 aa8.47□□□□□ -1.05
BRCA1-216ENST00000484087 CHRM1P11229 460 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-216ENST00000484087 IL1R1P14778 569 aa8.47□□□□□ -1.05
BRCA1-216ENST00000484087 RPS12P25398 132 aaKnown RBP8.47□□□□□ -1.05
BRCA1-216ENST00000484087 ATP8B2P98198 1209 aa8.47□□□□□ -1.05
BRCA1-216ENST00000484087 SCARF1Q14162 830 aa8.47□□□□□ -1.05
BRCA1-216ENST00000484087 STRIP1Q5VSL9 837 aa8.47□□□□□ -1.05
BRCA1-216ENST00000484087 ZNF467Q7Z7K2 595 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-216ENST00000484087 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
BRCA1-216ENST00000484087 KRTAP3-2Q9BYR7 98 aa8.47□□□□□ -1.05
BRCA1-216ENST00000484087 RYDENQ9NUL5 291 aaKnown RBP8.47□□□□□ -1.05
BRCA1-216ENST00000484087 CNTNAP1P78357 1384 aa8.46□□□□□ -1.05
BRCA1-216ENST00000484087 FGFR2P21802 821 aa8.46□□□□□ -1.05
BRCA1-216ENST00000484087 HIBADHP31937 336 aaKnown RBP8.46□□□□□ -1.05
BRCA1-216ENST00000484087 ZNF280AP59817 542 aaPredicted RBP8.46□□□□□ -1.05
BRCA1-216ENST00000484087 UBE4AQ14139 1066 aa8.46□□□□□ -1.05
BRCA1-216ENST00000484087 HSP90AB4PQ58FF6 505 aa8.46□□□□□ -1.05
BRCA1-216ENST00000484087 BMP2KLQ5H9B9 411 aa8.46□□□□□ -1.05
BRCA1-216ENST00000484087 CYP4F22Q6NT55 531 aa8.46□□□□□ -1.05
BRCA1-216ENST00000484087 MOB2Q70IA6 237 aa8.46□□□□□ -1.05
BRCA1-216ENST00000484087 KRT26Q7Z3Y9 468 aa8.46□□□□□ -1.05
BRCA1-216ENST00000484087 AGBL3Q8NEM8 1001 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms