RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 EAF2Q96CJ1 260 aaPredicted RBP16.47■□□□□ 0.23
SSR1-208ENST00000483409 SERPINA10Q9UK55 444 aa16.47■□□□□ 0.23
SSR1-208ENST00000483409 SUGT1Q9Y2Z0 365 aa16.47■□□□□ 0.23
SSR1-208ENST00000483409 SUPT16HQ9Y5B9 1047 aaKnown RBP16.47■□□□□ 0.23
SSR1-208ENST00000483409 CLRN2A0PK11 232 aa16.46■□□□□ 0.23
SSR1-208ENST00000483409 ARID4AP29374 1257 aaPredicted RBP16.46■□□□□ 0.23
SSR1-208ENST00000483409 TTC39AQ5SRH9 613 aa16.46■□□□□ 0.23
SSR1-208ENST00000483409 AACSQ86V21 672 aa16.46■□□□□ 0.23
SSR1-208ENST00000483409 DNAJC5GQ8N7S2 189 aa16.46■□□□□ 0.23
SSR1-208ENST00000483409 DBNLQ9UJU6 430 aaKnown RBP16.46■□□□□ 0.23
SSR1-208ENST00000483409 ABT1Q9ULW3 272 aaKnown RBP16.46■□□□□ 0.23
SSR1-208ENST00000483409 MAST3O60307 1309 aa16.45■□□□□ 0.22
SSR1-208ENST00000483409 SALL1Q9NSC2 1324 aa16.45■□□□□ 0.22
SSR1-208ENST00000483409 ZBTB22O15209 634 aa16.45■□□□□ 0.22
SSR1-208ENST00000483409 MYO1BO43795 1136 aa16.45■□□□□ 0.22
SSR1-208ENST00000483409 LDHBP07195 334 aaKnown RBP16.45■□□□□ 0.22
SSR1-208ENST00000483409 MCAMP43121 646 aa16.45■□□□□ 0.22
SSR1-208ENST00000483409 CCDC158Q5M9N0 1113 aa16.45■□□□□ 0.22
SSR1-208ENST00000483409 PRAMEF18Q5VWM3 479 aa16.45■□□□□ 0.22
SSR1-208ENST00000483409 APOBEC3FQ8IUX4 373 aaKnown RBP16.45■□□□□ 0.22
SSR1-208ENST00000483409 TEKT1Q969V4 418 aa16.45■□□□□ 0.22
SSR1-208ENST00000483409 KIF1BPQ96EK5 621 aa16.45■□□□□ 0.22
SSR1-208ENST00000483409 CDCA5Q96FF9 252 aa16.45■□□□□ 0.22
SSR1-208ENST00000483409 VEZTQ9HBM0 779 aa16.45■□□□□ 0.22
SSR1-208ENST00000483409 HMG20BQ9P0W2 317 aa16.45■□□□□ 0.22
SSR1-208ENST00000483409 ABCF2Q9UG63 623 aa16.45■□□□□ 0.22
SSR1-208ENST00000483409 MKRN1Q9UHC7 482 aaKnown RBP16.45■□□□□ 0.22
SSR1-208ENST00000483409 PCDHB15Q9Y5E8 787 aa16.45■□□□□ 0.22
SSR1-208ENST00000483409 PDS5AQ29RF7 1337 aaKnown RBP16.45■□□□□ 0.22
SSR1-208ENST00000483409 RAB11FIP3O75154 756 aa16.44■□□□□ 0.22
SSR1-208ENST00000483409 UQCRFS1P1P0C7P4 283 aa16.44■□□□□ 0.22
SSR1-208ENST00000483409 HDLBPQ00341 1268 aaKnown RBP16.44■□□□□ 0.22
SSR1-208ENST00000483409 SPATA5Q8NB90 893 aa16.44■□□□□ 0.22
SSR1-208ENST00000483409 KLRG1Q96E93 195 aa16.44■□□□□ 0.22
SSR1-208ENST00000483409 TDRD3Q9H7E2 651 aaKnown RBP16.44■□□□□ 0.22
SSR1-208ENST00000483409 DIXDC1Q155Q3 683 aa16.43■□□□□ 0.22
SSR1-208ENST00000483409 CLASRPQ8N2M8 674 aaKnown RBP16.43■□□□□ 0.22
SSR1-208ENST00000483409 ZGPATQ8N5A5 531 aaKnown RBP16.43■□□□□ 0.22
SSR1-208ENST00000483409 SNRKQ9NRH2 765 aa16.43■□□□□ 0.22
SSR1-208ENST00000483409 MAST2Q6P0Q8 1798 aa16.43■□□□□ 0.22
SSR1-208ENST00000483409 CNTNAP1P78357 1384 aa16.42■□□□□ 0.22
SSR1-208ENST00000483409 SPDYE2Q495Y8 402 aa16.42■□□□□ 0.22
SSR1-208ENST00000483409 TBC1D9Q6ZT07 1266 aa16.42■□□□□ 0.22
SSR1-208ENST00000483409 DZIP1Q86YF9 867 aaKnown RBP16.42■□□□□ 0.22
SSR1-208ENST00000483409 ZDHHC15Q96MV8 337 aa16.42■□□□□ 0.22
SSR1-208ENST00000483409 ZNF70Q9UC06 446 aaPredicted RBP16.42■□□□□ 0.22
SSR1-208ENST00000483409 TLL2Q9Y6L7 1015 aa16.42■□□□□ 0.22
SSR1-208ENST00000483409 PAPPA2Q9BXP8 1791 aa16.41■□□□□ 0.22
SSR1-208ENST00000483409 AK9Q5TCS8 1911 aa16.41■□□□□ 0.22
SSR1-208ENST00000483409 SPTY2D1Q68D10 685 aaPredicted RBP16.41■□□□□ 0.22
SSR1-208ENST00000483409 HHIPL2Q6UWX4 724 aa16.41■□□□□ 0.22
SSR1-208ENST00000483409 MRIQ9BWK5 157 aa16.41■□□□□ 0.22
SSR1-208ENST00000483409 DEFB129Q9H1M3 183 aa16.41■□□□□ 0.22
SSR1-208ENST00000483409 GBA2Q9HCG7 927 aaPredicted RBP16.41■□□□□ 0.22
SSR1-208ENST00000483409 DAGLAQ9Y4D2 1042 aa16.41■□□□□ 0.22
SSR1-208ENST00000483409 RASSF10A6NK89 507 aa16.4■□□□□ 0.22
SSR1-208ENST00000483409 TCP10L2B9ZVM9 353 aa16.4■□□□□ 0.22
SSR1-208ENST00000483409 SMARCA5O60264 1052 aaPredicted RBP16.4■□□□□ 0.22
SSR1-208ENST00000483409 IFIT2P09913 472 aaKnown RBP16.4■□□□□ 0.22
SSR1-208ENST00000483409 CACNB3P54284 484 aa16.4■□□□□ 0.22
SSR1-208ENST00000483409 DEFB115Q30KQ5 88 aa16.4■□□□□ 0.22
SSR1-208ENST00000483409 APOBEC3HQ6NTF7 200 aaKnown RBP16.4■□□□□ 0.22
SSR1-208ENST00000483409 PAXIP1Q6ZW49 1069 aaPredicted RBP16.4■□□□□ 0.22
SSR1-208ENST00000483409 ERICH6Q7L0X2 663 aa16.4■□□□□ 0.22
SSR1-208ENST00000483409 SAPCD2Q86UD0 394 aa16.4■□□□□ 0.22
SSR1-208ENST00000483409 ZNF512BQ96KM6 892 aaPredicted RBP16.4■□□□□ 0.22
SSR1-208ENST00000483409 LRRCC1Q9C099 1032 aa16.4■□□□□ 0.22
SSR1-208ENST00000483409 DCTPP1Q9H773 170 aa16.4■□□□□ 0.22
SSR1-208ENST00000483409 DOCK2Q92608 1830 aa16.4■□□□□ 0.22
SSR1-208ENST00000483409 ZAP70P43403 619 aa16.39■□□□□ 0.21
SSR1-208ENST00000483409 C2orf69Q8N8R5 385 aa16.39■□□□□ 0.21
SSR1-208ENST00000483409 EXOC6Q8TAG9 804 aa16.39■□□□□ 0.21
SSR1-208ENST00000483409 CYP2E1P05181 493 aaPredicted RBP16.38■□□□□ 0.21
SSR1-208ENST00000483409 VEGFBP49765 207 aa16.38■□□□□ 0.21
SSR1-208ENST00000483409 HUNKP57058 714 aa16.38■□□□□ 0.21
SSR1-208ENST00000483409 MECOMQ03112 1051 aa16.38■□□□□ 0.21
SSR1-208ENST00000483409 GRM1Q13255 1194 aa16.38■□□□□ 0.21
SSR1-208ENST00000483409 RASA3Q14644 834 aa16.38■□□□□ 0.21
SSR1-208ENST00000483409 TMOD2Q9NZR1 351 aa16.38■□□□□ 0.21
SSR1-208ENST00000483409 RAI14Q9P0K7 980 aa16.38■□□□□ 0.21
SSR1-208ENST00000483409 LRP2BPQ9P2M1 347 aa16.38■□□□□ 0.21
SSR1-208ENST00000483409 NDUFB9Q9Y6M9 179 aa16.38■□□□□ 0.21
SSR1-208ENST00000483409 NF2P35240 595 aa16.37■□□□□ 0.21
SSR1-208ENST00000483409 IRX6P78412 446 aaPredicted RBP16.37■□□□□ 0.21
SSR1-208ENST00000483409 TNFAIP1Q13829 316 aa16.37■□□□□ 0.21
SSR1-208ENST00000483409 PRKG1Q13976 671 aa16.37■□□□□ 0.21
SSR1-208ENST00000483409 TTLL12Q14166 644 aaPredicted RBP16.37■□□□□ 0.21
SSR1-208ENST00000483409 CYP4F22Q6NT55 531 aa16.37■□□□□ 0.21
SSR1-208ENST00000483409 CDC42EP5Q6NZY7 148 aa16.37■□□□□ 0.21
SSR1-208ENST00000483409 MOB2Q70IA6 237 aa16.37■□□□□ 0.21
SSR1-208ENST00000483409 SLF2Q8IX21 1173 aa16.37■□□□□ 0.21
SSR1-208ENST00000483409 ZNF384Q8TF68 577 aa16.37■□□□□ 0.21
SSR1-208ENST00000483409 PPP2R3BQ9Y5P8 575 aa16.37■□□□□ 0.21
SSR1-208ENST00000483409 PCNTO95613 3336 aa16.37■□□□□ 0.21
SSR1-208ENST00000483409 SSC5DA1L4H1 1573 aa16.37■□□□□ 0.21
SSR1-208ENST00000483409 GAKO14976 1311 aa16.37■□□□□ 0.21
SSR1-208ENST00000483409 NBPF12Q5TAG4 269 aaPredicted RBP16.36■□□□□ 0.21
SSR1-208ENST00000483409 NSUN4Q96CB9 384 aaKnown RBP16.36■□□□□ 0.21
SSR1-208ENST00000483409 CAPNS2Q96L46 248 aa16.36■□□□□ 0.21
SSR1-208ENST00000483409 TMEM39BQ9GZU3 492 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms