RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 THUMPD2Q9BTF0 503 aaKnown RBP7.69□□□□□ -1.18
CSDE1-207ENST00000483407 EVA1BQ9NVM1 165 aa7.69□□□□□ -1.18
CSDE1-207ENST00000483407 MAP10Q9P2G4 905 aa7.69□□□□□ -1.18
CSDE1-207ENST00000483407 TFIP11Q9UBB9 837 aaKnown RBP7.69□□□□□ -1.18
CSDE1-207ENST00000483407 TSPYL4Q9UJ04 414 aa7.69□□□□□ -1.18
CSDE1-207ENST00000483407 DICER1Q9UPY3 1922 aaKnown RBP7.69□□□□□ -1.18
CSDE1-207ENST00000483407 UBN2Q6ZU65 1347 aa7.69□□□□□ -1.18
CSDE1-207ENST00000483407 RIC1Q4ADV7 1423 aa7.69□□□□□ -1.18
CSDE1-207ENST00000483407 TCERG1O14776 1098 aaKnown RBP7.68□□□□□ -1.18
CSDE1-207ENST00000483407 PPIP5K2O43314 1243 aa7.68□□□□□ -1.18
CSDE1-207ENST00000483407 FBXO45P0C2W1 286 aa7.68□□□□□ -1.18
CSDE1-207ENST00000483407 EIF2S2P20042 333 aaKnown RBP7.68□□□□□ -1.18
CSDE1-207ENST00000483407 RFX1P22670 979 aa7.68□□□□□ -1.18
CSDE1-207ENST00000483407 ECE1P42892 770 aa7.68□□□□□ -1.18
CSDE1-207ENST00000483407 MMP16P51512 607 aa7.68□□□□□ -1.18
CSDE1-207ENST00000483407 PDE4CQ08493 712 aa7.68□□□□□ -1.18
CSDE1-207ENST00000483407 LMOD3Q0VAK6 560 aa7.68□□□□□ -1.18
CSDE1-207ENST00000483407 HSP90AB3PQ58FF7 597 aa7.68□□□□□ -1.18
CSDE1-207ENST00000483407 THSD4Q6ZMP0 1018 aa7.68□□□□□ -1.18
CSDE1-207ENST00000483407 NYAP1Q6ZVC0 841 aa7.68□□□□□ -1.18
CSDE1-207ENST00000483407 USP50Q70EL3 339 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-207ENST00000483407 SUPT20HQ8NEM7 779 aa7.68□□□□□ -1.18
CSDE1-207ENST00000483407 UTP14AQ9BVJ6 771 aaKnown RBP7.68□□□□□ -1.18
CSDE1-207ENST00000483407 VPS33BQ9H267 617 aa7.68□□□□□ -1.18
CSDE1-207ENST00000483407 DDX21Q9NR30 783 aaKnown RBP eCLIP7.68□□□□□ -1.18
CSDE1-207ENST00000483407 ARFGEF2Q9Y6D5 1785 aa7.68□□□□□ -1.18
CSDE1-207ENST00000483407 SCN4AP35499 1836 aa7.68□□□□□ -1.18
CSDE1-207ENST00000483407 SNED1Q8TER0 1413 aa7.68□□□□□ -1.18
CSDE1-207ENST00000483407 CCNYL3P0C7X3 344 aa7.67□□□□□ -1.18
CSDE1-207ENST00000483407 EPS15P42566 896 aa7.67□□□□□ -1.18
CSDE1-207ENST00000483407 SCNN1DP51172 638 aa7.67□□□□□ -1.18
CSDE1-207ENST00000483407 LBX1P52954 281 aa7.67□□□□□ -1.18
CSDE1-207ENST00000483407 BABAM1Q9NWV8 329 aa7.67□□□□□ -1.18
CSDE1-207ENST00000483407 ATP6V0A2Q9Y487 856 aa7.67□□□□□ -1.18
CSDE1-207ENST00000483407 WDR33Q9C0J8 1336 aaKnown RBP7.67□□□□□ -1.18
CSDE1-207ENST00000483407 BBOX1O75936 387 aa7.66□□□□□ -1.18
CSDE1-207ENST00000483407 RIPK4P57078 832 aa7.66□□□□□ -1.18
CSDE1-207ENST00000483407 KCNH2Q12809 1159 aa7.66□□□□□ -1.18
CSDE1-207ENST00000483407 AOC3Q16853 763 aa7.66□□□□□ -1.18
CSDE1-207ENST00000483407 SLC10A5Q5PT55 438 aa7.66□□□□□ -1.18
CSDE1-207ENST00000483407 DPP8Q6V1X1 898 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-207ENST00000483407 NUDT12Q9BQG2 462 aa7.66□□□□□ -1.18
CSDE1-207ENST00000483407 ADARB2Q9NS39 739 aaKnown RBP7.66□□□□□ -1.18
CSDE1-207ENST00000483407 ZNRF3Q9ULT6 936 aa7.66□□□□□ -1.18
CSDE1-207ENST00000483407 GPSM3Q9Y4H4 160 aa7.66□□□□□ -1.18
CSDE1-207ENST00000483407 LAMB4A4D0S4 1761 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 ABCC4O15439 1325 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 HSPA8P11142 646 aaKnown RBP7.65□□□□□ -1.18
CSDE1-207ENST00000483407 CTHP32929 405 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 COPS2P61201 443 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 AIMP1Q12904 312 aaKnown RBP7.65□□□□□ -1.18
CSDE1-207ENST00000483407 GRM1Q13255 1194 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 CACNA1SQ13698 1873 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 TNIP1Q15025 636 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 CIAPIN1Q6FI81 312 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 PDXDC2PQ6P474 469 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 TBC1D9Q6ZT07 1266 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 DDX46Q7L014 1031 aaKnown RBP7.65□□□□□ -1.18
CSDE1-207ENST00000483407 COPS6Q7L5N1 327 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 TMC4Q7Z404 712 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 LRP10Q7Z4F1 713 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 SP8Q8IXZ3 490 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 MPNDQ8N594 471 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 ARMC2Q8NEN0 867 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 GPKOWQ92917 476 aaPredicted RBP eCLIP7.65□□□□□ -1.18
CSDE1-207ENST00000483407 CAPNS2Q96L46 248 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 GPR101Q96P66 508 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-207ENST00000483407 BCL2L13Q9BXK5 485 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 RTFDC1Q9BY42 306 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-207ENST00000483407 GPRC5DQ9NZD1 345 aa7.65□□□□□ -1.18
CSDE1-207ENST00000483407 MAFBQ9Y5Q3 323 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-207ENST00000483407 ADAMTSL1Q8N6G6 1762 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 SH3TC1Q8TE82 1336 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 CDHR2Q9BYE9 1310 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 TRAF5O00463 557 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 ATP9BO43861 1147 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 ANXA1P04083 346 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 TMPOP42166 694 aaKnown RBP7.64□□□□□ -1.19
CSDE1-207ENST00000483407 CXCL9Q07325 125 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 KIAA2012Q0VF49 1180 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 TCIRG1Q13488 830 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 GRAPQ13588 217 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 RALBP1Q15311 655 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 PROSER3Q2NL68 480 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 CYP4F22Q6NT55 531 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 NLRP10Q86W26 655 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 GRAPLQ8TC17 118 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-207ENST00000483407 XAGE3Q8WTP9 111 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 TRMT112Q9UI30 125 aaKnown RBP7.64□□□□□ -1.19
CSDE1-207ENST00000483407 USTQ9Y2C2 406 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 TLL2Q9Y6L7 1015 aa7.64□□□□□ -1.19
CSDE1-207ENST00000483407 COL4A5P29400 1685 aa7.63□□□□□ -1.19
CSDE1-207ENST00000483407 CELF2O95319 508 aaKnown RBP7.63□□□□□ -1.19
CSDE1-207ENST00000483407 ATG7O95352 703 aa7.63□□□□□ -1.19
CSDE1-207ENST00000483407 ADH1BP00325 375 aa7.63□□□□□ -1.19
CSDE1-207ENST00000483407 HCLS1P14317 486 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-207ENST00000483407 MAP2K2P36507 400 aa7.63□□□□□ -1.19
CSDE1-207ENST00000483407 GMPSP49915 693 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-207ENST00000483407 FMR1Q06787 632 aaKnown RBP eCLIP7.63□□□□□ -1.19
CSDE1-207ENST00000483407 CST9Q5W186 159 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms