RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 ISM2Q6H9L7 571 aa16.55■□□□□ 0.24
COL9A2-207ENST00000482722 NAT10Q9H0A0 1025 aaKnown RBP16.55■□□□□ 0.24
COL9A2-207ENST00000482722 EPC1Q9H2F5 836 aa16.55■□□□□ 0.24
COL9A2-207ENST00000482722 MUM1L1Q5H9M0 696 aa16.54■□□□□ 0.24
COL9A2-207ENST00000482722 OTUD7BQ6GQQ9 843 aa16.54■□□□□ 0.24
COL9A2-207ENST00000482722 MNS1Q8NEH6 495 aa16.54■□□□□ 0.24
COL9A2-207ENST00000482722 ERVV-2B6SEH9 535 aa16.54■□□□□ 0.24
COL9A2-207ENST00000482722 FANCGO15287 622 aa16.54■□□□□ 0.24
COL9A2-207ENST00000482722 SASH3O75995 380 aa16.54■□□□□ 0.24
COL9A2-207ENST00000482722 OAS2P29728 719 aaKnown RBP16.54■□□□□ 0.24
COL9A2-207ENST00000482722 DPCR1Q3MIW9 517 aa16.54■□□□□ 0.24
COL9A2-207ENST00000482722 TSGA10IPQ3SY00 556 aa16.54■□□□□ 0.24
COL9A2-207ENST00000482722 PLBD2Q8NHP8 589 aa16.54■□□□□ 0.24
COL9A2-207ENST00000482722 FAM89AQ96GI7 184 aa16.54■□□□□ 0.24
COL9A2-207ENST00000482722 SLC4A9Q96Q91 983 aa16.54■□□□□ 0.24
COL9A2-207ENST00000482722 HAUS7Q99871 368 aa16.54■□□□□ 0.24
COL9A2-207ENST00000482722 UBXN6Q9BZV1 441 aa16.54■□□□□ 0.24
COL9A2-207ENST00000482722 TADA3O75528 432 aa16.53■□□□□ 0.24
COL9A2-207ENST00000482722 KCNQ4P56696 695 aa16.53■□□□□ 0.24
COL9A2-207ENST00000482722 USPL1Q5W0Q7 1092 aa16.53■□□□□ 0.24
COL9A2-207ENST00000482722 CARD6Q9BX69 1037 aa16.53■□□□□ 0.24
COL9A2-207ENST00000482722 ATG3Q9NT62 314 aa16.53■□□□□ 0.24
COL9A2-207ENST00000482722 PTPN21Q16825 1174 aa16.53■□□□□ 0.24
COL9A2-207ENST00000482722 ADAMTS7Q9UKP4 1686 aa16.52■□□□□ 0.24
COL9A2-207ENST00000482722 URI1O94763 535 aaPredicted RBP16.52■□□□□ 0.24
COL9A2-207ENST00000482722 KCNJ6P48051 423 aa16.52■□□□□ 0.24
COL9A2-207ENST00000482722 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.24
COL9A2-207ENST00000482722 CERS3Q8IU89 383 aa16.52■□□□□ 0.24
COL9A2-207ENST00000482722 TBC1D8O95759 1140 aa16.52■□□□□ 0.24
COL9A2-207ENST00000482722 TRIM65Q6PJ69 517 aa16.52■□□□□ 0.24
COL9A2-207ENST00000482722 KBTBD3Q8NAB2 608 aa16.52■□□□□ 0.24
COL9A2-207ENST00000482722 PUS3Q9BZE2 481 aaKnown RBP16.52■□□□□ 0.24
COL9A2-207ENST00000482722 PAG1Q9NWQ8 432 aa16.52■□□□□ 0.24
COL9A2-207ENST00000482722 PHLPP2Q6ZVD8 1323 aa16.52■□□□□ 0.24
COL9A2-207ENST00000482722 HLFQ16534 295 aa16.52■□□□□ 0.23
COL9A2-207ENST00000482722 LRRC24Q50LG9 513 aa16.52■□□□□ 0.23
COL9A2-207ENST00000482722 SMIM5Q71RC9 77 aa16.52■□□□□ 0.23
COL9A2-207ENST00000482722 ILDR1Q86SU0 546 aaPredicted RBP16.52■□□□□ 0.23
COL9A2-207ENST00000482722 SMARCC2Q8TAQ2 1214 aa16.52■□□□□ 0.23
COL9A2-207ENST00000482722 CCDC34Q96HJ3 373 aa16.52■□□□□ 0.23
COL9A2-207ENST00000482722 LCMT1Q9UIC8 334 aa16.52■□□□□ 0.23
COL9A2-207ENST00000482722 PCDHA7Q9UN72 937 aa16.52■□□□□ 0.23
COL9A2-207ENST00000482722 TUBB4AP04350 444 aa16.51■□□□□ 0.23
COL9A2-207ENST00000482722 POLR3DP05423 398 aaPredicted RBP16.51■□□□□ 0.23
COL9A2-207ENST00000482722 NDUFA8P51970 172 aa16.51■□□□□ 0.23
COL9A2-207ENST00000482722 RABL6Q3YEC7 729 aaPredicted RBP16.51■□□□□ 0.23
COL9A2-207ENST00000482722 HSP90AB3PQ58FF7 597 aa16.51■□□□□ 0.23
COL9A2-207ENST00000482722 RSPH14Q9UHP6 348 aa16.51■□□□□ 0.23
COL9A2-207ENST00000482722 TBC1D2BQ9UPU7 963 aa16.51■□□□□ 0.23
COL9A2-207ENST00000482722 MYH15Q9Y2K3 1946 aa16.51■□□□□ 0.23
COL9A2-207ENST00000482722 TRIM66O15016 1216 aa16.51■□□□□ 0.23
COL9A2-207ENST00000482722 EVCP57679 992 aa16.51■□□□□ 0.23
COL9A2-207ENST00000482722 ZSCAN26Q16670 478 aa16.51■□□□□ 0.23
COL9A2-207ENST00000482722 NRDCO43847 1150 aa16.5■□□□□ 0.23
COL9A2-207ENST00000482722 FKBP4Q02790 459 aaKnown RBP eCLIP16.5■□□□□ 0.23
COL9A2-207ENST00000482722 SMC1AQ14683 1233 aaKnown RBP16.5■□□□□ 0.23
COL9A2-207ENST00000482722 NKX1-1Q15270 411 aaPredicted RBP16.5■□□□□ 0.23
COL9A2-207ENST00000482722 ZRSR1Q15695 479 aaKnown RBP16.5■□□□□ 0.23
COL9A2-207ENST00000482722 TTLL5Q6EMB2 1281 aa16.5■□□□□ 0.23
COL9A2-207ENST00000482722 CCDC191Q8NCU4 936 aa16.5■□□□□ 0.23
COL9A2-207ENST00000482722 RASSF4Q9H2L5 321 aa16.5■□□□□ 0.23
COL9A2-207ENST00000482722 GJB4Q9NTQ9 266 aa16.5■□□□□ 0.23
COL9A2-207ENST00000482722 JCADQ9P266 1359 aa16.5■□□□□ 0.23
COL9A2-207ENST00000482722 EFCAB8A8MWE9 144 aa16.5■□□□□ 0.23
COL9A2-207ENST00000482722 PFKFB2O60825 505 aa16.5■□□□□ 0.23
COL9A2-207ENST00000482722 TNNT3P45378 269 aaPredicted RBP16.5■□□□□ 0.23
COL9A2-207ENST00000482722 GYS2P54840 703 aa16.5■□□□□ 0.23
COL9A2-207ENST00000482722 CC2D1AQ6P1N0 951 aaPredicted RBP16.5■□□□□ 0.23
COL9A2-207ENST00000482722 GPHNQ9NQX3 736 aaPredicted RBP16.5■□□□□ 0.23
COL9A2-207ENST00000482722 EXOC5O00471 708 aa16.49■□□□□ 0.23
COL9A2-207ENST00000482722 CASP7P55210 303 aa16.49■□□□□ 0.23
COL9A2-207ENST00000482722 HAND2P61296 217 aa16.49■□□□□ 0.23
COL9A2-207ENST00000482722 FOXO4P98177 505 aa16.49■□□□□ 0.23
COL9A2-207ENST00000482722 GPS2Q13227 327 aa16.49■□□□□ 0.23
COL9A2-207ENST00000482722 SF3A1Q15459 793 aaKnown RBP16.49■□□□□ 0.23
COL9A2-207ENST00000482722 CCDC158Q5M9N0 1113 aa16.49■□□□□ 0.23
COL9A2-207ENST00000482722 DHX32Q7L7V1 743 aaKnown RBP16.49■□□□□ 0.23
COL9A2-207ENST00000482722 C10orf67Q8IYJ2 551 aa16.49■□□□□ 0.23
COL9A2-207ENST00000482722 FMR1NBQ8N0W7 255 aaPredicted RBP16.49■□□□□ 0.23
COL9A2-207ENST00000482722 PARP3Q9Y6F1 533 aa16.49■□□□□ 0.23
COL9A2-207ENST00000482722 PKD1L3Q7Z443 1732 aa16.49■□□□□ 0.23
COL9A2-207ENST00000482722 ATP8B1O43520 1251 aa16.49■□□□□ 0.23
COL9A2-207ENST00000482722 LMOD1P29536 600 aaPredicted RBP16.49■□□□□ 0.23
COL9A2-207ENST00000482722 NAA16Q6N069 864 aaPredicted RBP16.49■□□□□ 0.23
COL9A2-207ENST00000482722 MYO1CO00159 1063 aa16.48■□□□□ 0.23
COL9A2-207ENST00000482722 IFIT1P09914 478 aaKnown RBP16.48■□□□□ 0.23
COL9A2-207ENST00000482722 GOLGA8FQ08AF8 430 aa16.48■□□□□ 0.23
COL9A2-207ENST00000482722 GOLGA8DPQ0D2H9 430 aa16.48■□□□□ 0.23
COL9A2-207ENST00000482722 LRRFIP1Q32MZ4 808 aaKnown RBP16.48■□□□□ 0.23
COL9A2-207ENST00000482722 ATG9AQ7Z3C6 839 aa16.48■□□□□ 0.23
COL9A2-207ENST00000482722 MRPS27Q92552 414 aaKnown RBP16.48■□□□□ 0.23
COL9A2-207ENST00000482722 ZNF396Q96N95 335 aaPredicted RBP16.48■□□□□ 0.23
COL9A2-207ENST00000482722 SRRTQ9BXP5 876 aaKnown RBP16.48■□□□□ 0.23
COL9A2-207ENST00000482722 CWC25Q9NXE8 425 aaPredicted RBP16.48■□□□□ 0.23
COL9A2-207ENST00000482722 AFDNP55196 1824 aaKnown RBP16.48■□□□□ 0.23
COL9A2-207ENST00000482722 FAM182BQ5T319 152 aa16.48■□□□□ 0.23
COL9A2-207ENST00000482722 REXO1L1PQ8IX06 675 aa16.48■□□□□ 0.23
COL9A2-207ENST00000482722 FAM177A1Q8N128 213 aaPredicted RBP16.48■□□□□ 0.23
COL9A2-207ENST00000482722 KIAA1468Q9P260 1216 aa16.48■□□□□ 0.23
COL9A2-207ENST00000482722 CLIC4Q9Y696 253 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms