RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 CD8BP10966 210 aa4.37□□□□□ -1.71
USH2A-204ENST00000481786 ECM1Q16610 540 aa4.37□□□□□ -1.71
USH2A-204ENST00000481786 CAPN12Q6ZSI9 719 aa4.37□□□□□ -1.71
USH2A-204ENST00000481786 WNT8BQ93098 351 aa4.37□□□□□ -1.71
USH2A-204ENST00000481786 SUGCTQ9HAC7 445 aa4.37□□□□□ -1.71
USH2A-204ENST00000481786 TMEM63CQ9P1W3 806 aa4.37□□□□□ -1.71
USH2A-204ENST00000481786 CNTN3Q9P232 1028 aa4.37□□□□□ -1.71
USH2A-204ENST00000481786 SLAIN2Q9P270 581 aa4.37□□□□□ -1.71
USH2A-204ENST00000481786 TIMELESSQ9UNS1 1208 aa4.37□□□□□ -1.71
USH2A-204ENST00000481786 DYNC1LI2O43237 492 aaPredicted RBP4.36□□□□□ -1.71
USH2A-204ENST00000481786 PPP1R15AO75807 674 aaPredicted RBP4.36□□□□□ -1.71
USH2A-204ENST00000481786 CABP4P57796 275 aa4.36□□□□□ -1.71
USH2A-204ENST00000481786 C19orf57Q0VDD7 668 aa4.36□□□□□ -1.71
USH2A-204ENST00000481786 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
USH2A-204ENST00000481786 ATG4DQ86TL0 474 aaPredicted RBP4.36□□□□□ -1.71
USH2A-204ENST00000481786 LRRN4CLQ8ND94 238 aa4.36□□□□□ -1.71
USH2A-204ENST00000481786 GPR152Q8TDT2 470 aa4.36□□□□□ -1.71
USH2A-204ENST00000481786 TMEM40Q8WWA1 233 aa4.36□□□□□ -1.71
USH2A-204ENST00000481786 EZH1Q92800 747 aaPredicted RBP4.36□□□□□ -1.71
USH2A-204ENST00000481786 CLP1Q92989 425 aaKnown RBP4.36□□□□□ -1.71
USH2A-204ENST00000481786 SLC38A3Q99624 504 aa4.36□□□□□ -1.71
USH2A-204ENST00000481786 CYP4F12Q9HCS2 524 aa4.36□□□□□ -1.71
USH2A-204ENST00000481786 ABI2Q9NYB9 513 aaPredicted RBP4.36□□□□□ -1.71
USH2A-204ENST00000481786 CXXC1Q9P0U4 656 aaPredicted RBP4.36□□□□□ -1.71
USH2A-204ENST00000481786 SOX13Q9UN79 622 aa4.36□□□□□ -1.71
USH2A-204ENST00000481786 U3KQE9 123 aa4.36□□□□□ -1.71
USH2A-204ENST00000481786 TNFRSF10BO14763 440 aa4.35□□□□□ -1.71
USH2A-204ENST00000481786 ZBTB39O15060 712 aa4.35□□□□□ -1.71
USH2A-204ENST00000481786 SOX4Q06945 474 aaPredicted RBP4.35□□□□□ -1.71
USH2A-204ENST00000481786 DUSP27Q5VZP5 1158 aa4.35□□□□□ -1.71
USH2A-204ENST00000481786 FAM84AQ96KN4 292 aa4.35□□□□□ -1.71
USH2A-204ENST00000481786 KRTAP9-8Q9BYQ0 159 aa4.35□□□□□ -1.71
USH2A-204ENST00000481786 LGR6Q9HBX8 967 aa4.35□□□□□ -1.71
USH2A-204ENST00000481786 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.35□□□□□ -1.71
USH2A-204ENST00000481786 DZANK1Q9NVP4 752 aa4.35□□□□□ -1.71
USH2A-204ENST00000481786 LMCD1Q9NZU5 365 aa4.35□□□□□ -1.71
USH2A-204ENST00000481786 JAG2Q9Y219 1238 aa4.35□□□□□ -1.71
USH2A-204ENST00000481786 ACTL7BQ9Y614 415 aa4.35□□□□□ -1.71
USH2A-204ENST00000481786 LRRC10BA6NIK2 292 aa4.34□□□□□ -1.71
USH2A-204ENST00000481786 TMEM88BA6NKF7 163 aa4.34□□□□□ -1.71
USH2A-204ENST00000481786 FAM177BA6PVY3 158 aa4.34□□□□□ -1.71
USH2A-204ENST00000481786 SUPT5HO00267 1087 aaKnown RBP4.34□□□□□ -1.71
USH2A-204ENST00000481786 PDE2AO00408 941 aaPredicted RBP4.34□□□□□ -1.71
USH2A-204ENST00000481786 RAB6AP20340 208 aa4.34□□□□□ -1.71
USH2A-204ENST00000481786 FUT4P22083 530 aa4.34□□□□□ -1.71
USH2A-204ENST00000481786 VN1R5Q7Z5H4 357 aa4.34□□□□□ -1.71
USH2A-204ENST00000481786 LRRC56Q8IYG6 542 aaPredicted RBP4.34□□□□□ -1.71
USH2A-204ENST00000481786 PLD6Q8N2A8 252 aaKnown RBP4.34□□□□□ -1.71
USH2A-204ENST00000481786 PIK3R5Q8WYR1 880 aa4.34□□□□□ -1.71
USH2A-204ENST00000481786 SEMA6CQ9H3T2 930 aa4.34□□□□□ -1.71
USH2A-204ENST00000481786 C1GALT1Q9NS00 363 aa4.34□□□□□ -1.71
USH2A-204ENST00000481786 SALL4Q9UJQ4 1053 aa4.34□□□□□ -1.71
USH2A-204ENST00000481786 ZNF503-AS2A6NEH8 195 aa4.33□□□□□ -1.72
USH2A-204ENST00000481786 CTSBP07858 339 aa4.33□□□□□ -1.72
USH2A-204ENST00000481786 ZSCAN22P10073 491 aaPredicted RBP4.33□□□□□ -1.72
USH2A-204ENST00000481786 BRD2P25440 801 aaKnown RBP4.33□□□□□ -1.72
USH2A-204ENST00000481786 ZAP70P43403 619 aa4.33□□□□□ -1.72
USH2A-204ENST00000481786 RAP1GAPP47736 663 aa4.33□□□□□ -1.72
USH2A-204ENST00000481786 MLANAQ16655 118 aa4.33□□□□□ -1.72
USH2A-204ENST00000481786 EXOSC6Q5RKV6 272 aaKnown RBP4.33□□□□□ -1.72
USH2A-204ENST00000481786 TTLL10Q6ZVT0 673 aa4.33□□□□□ -1.72
USH2A-204ENST00000481786 FAM181AQ8N9Y4 354 aa4.33□□□□□ -1.72
USH2A-204ENST00000481786 MKNK1Q9BUB5 465 aa4.33□□□□□ -1.72
USH2A-204ENST00000481786 ADH5P11766 374 aa4.32□□□□□ -1.72
USH2A-204ENST00000481786 ATP2B4P23634 1241 aa4.32□□□□□ -1.72
USH2A-204ENST00000481786 ARL4DP49703 201 aa4.32□□□□□ -1.72
USH2A-204ENST00000481786 IKBKEQ14164 716 aa4.32□□□□□ -1.72
USH2A-204ENST00000481786 C16orf46Q6P387 395 aa4.32□□□□□ -1.72
USH2A-204ENST00000481786 SEZ6L2Q6UXD5 910 aa4.32□□□□□ -1.72
USH2A-204ENST00000481786 C1orf127Q8N9H9 656 aa4.32□□□□□ -1.72
USH2A-204ENST00000481786 TOX2Q96NM4 488 aa4.32□□□□□ -1.72
USH2A-204ENST00000481786 ELP3Q9H9T3 547 aa4.32□□□□□ -1.72
USH2A-204ENST00000481786 PRDM7Q9NQW5 492 aa4.32□□□□□ -1.72
USH2A-204ENST00000481786 FAM105AQ9NUU6 356 aa4.32□□□□□ -1.72
USH2A-204ENST00000481786 CRIM1Q9NZV1 1036 aa4.32□□□□□ -1.72
USH2A-204ENST00000481786 NAA30Q147X3 362 aaPredicted RBP4.31□□□□□ -1.72
USH2A-204ENST00000481786 LIN37Q96GY3 246 aaPredicted RBP4.31□□□□□ -1.72
USH2A-204ENST00000481786 SEPT3Q9UH03 358 aa4.31□□□□□ -1.72
USH2A-204ENST00000481786 CARNS1A5YM72 827 aa4.3□□□□□ -1.72
USH2A-204ENST00000481786 A6NHS1 94 aa4.3□□□□□ -1.72
USH2A-204ENST00000481786 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.3□□□□□ -1.72
USH2A-204ENST00000481786 KRT1P04264 644 aa4.3□□□□□ -1.72
USH2A-204ENST00000481786 SSFA2P28290 1259 aa4.3□□□□□ -1.72
USH2A-204ENST00000481786 GSTM4Q03013 218 aa4.3□□□□□ -1.72
USH2A-204ENST00000481786 STK11IPQ8N1F8 1099 aa4.3□□□□□ -1.72
USH2A-204ENST00000481786 PI4K2BQ8TCG2 481 aa4.3□□□□□ -1.72
USH2A-204ENST00000481786 NXPE3Q969Y0 559 aa4.3□□□□□ -1.72
USH2A-204ENST00000481786 ARID3AQ99856 593 aa4.3□□□□□ -1.72
USH2A-204ENST00000481786 NRSN2Q9GZP1 204 aa4.3□□□□□ -1.72
USH2A-204ENST00000481786 ACSS3Q9H6R3 686 aa4.3□□□□□ -1.72
USH2A-204ENST00000481786 ECEL1O95672 775 aa4.29□□□□□ -1.72
USH2A-204ENST00000481786 CYP27A1Q02318 531 aa4.29□□□□□ -1.72
USH2A-204ENST00000481786 PHLDB3Q6NSJ2 640 aa4.29□□□□□ -1.72
USH2A-204ENST00000481786 OGFOD3Q6PK18 319 aa4.29□□□□□ -1.72
USH2A-204ENST00000481786 DYMQ7RTS9 669 aa4.29□□□□□ -1.72
USH2A-204ENST00000481786 ATCAYQ86WG3 371 aa4.29□□□□□ -1.72
USH2A-204ENST00000481786 BHLHE22Q8NFJ8 381 aaPredicted RBP4.29□□□□□ -1.72
USH2A-204ENST00000481786 NUDT16Q96DE0 195 aaKnown RBP4.29□□□□□ -1.72
USH2A-204ENST00000481786 ZKSCAN3Q9BRR0 538 aa4.29□□□□□ -1.72
USH2A-204ENST00000481786 YIPF2Q9BWQ6 316 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms