RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.7■■□□□ 1.06
MRPL28-209ENST00000481453 ZKSCAN5Q9Y2L8 839 aa21.7■■□□□ 1.06
MRPL28-209ENST00000481453 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.7■■□□□ 1.06
MRPL28-209ENST00000481453 FIBPO43427 364 aa21.7■■□□□ 1.06
MRPL28-209ENST00000481453 FBXL16Q8N461 479 aa21.7■■□□□ 1.06
MRPL28-209ENST00000481453 ZNF500O60304 480 aaPredicted RBP21.69■■□□□ 1.06
MRPL28-209ENST00000481453 PFKFB2O60825 505 aa21.69■■□□□ 1.06
MRPL28-209ENST00000481453 APOBRQ0VD83 1088 aa21.69■■□□□ 1.06
MRPL28-209ENST00000481453 SCRN1Q12765 414 aa21.69■■□□□ 1.06
MRPL28-209ENST00000481453 CHST3Q7LGC8 479 aa21.69■■□□□ 1.06
MRPL28-209ENST00000481453 MB21D2Q8IYB1 491 aaPredicted RBP21.69■■□□□ 1.06
MRPL28-209ENST00000481453 IQSEC3Q9UPP2 1182 aaPredicted RBP21.69■■□□□ 1.06
MRPL28-209ENST00000481453 TPM2P07951 284 aa21.68■■□□□ 1.06
MRPL28-209ENST00000481453 LETM1O95202 739 aaPredicted RBP21.68■■□□□ 1.06
MRPL28-209ENST00000481453 MCM5P33992 734 aa21.68■■□□□ 1.06
MRPL28-209ENST00000481453 CSPP1Q1MSJ5 1256 aa21.68■■□□□ 1.06
MRPL28-209ENST00000481453 FAM184AQ8NB25 1140 aa21.68■■□□□ 1.06
MRPL28-209ENST00000481453 EP400Q96L91 3159 aa21.67■■□□□ 1.06
MRPL28-209ENST00000481453 JAK2O60674 1132 aa21.67■■□□□ 1.06
MRPL28-209ENST00000481453 TRIM37O94972 964 aa21.67■■□□□ 1.06
MRPL28-209ENST00000481453 FGD1P98174 961 aa21.67■■□□□ 1.06
MRPL28-209ENST00000481453 SLC27A3Q5K4L6 730 aa21.67■■□□□ 1.06
MRPL28-209ENST00000481453 AIDAQ96BJ3 306 aa21.67■■□□□ 1.06
MRPL28-209ENST00000481453 FAM84BQ96KN1 310 aaPredicted RBP21.67■■□□□ 1.06
MRPL28-209ENST00000481453 ZNF213O14771 459 aa21.67■■□□□ 1.06
MRPL28-209ENST00000481453 MBD4O95243 580 aa21.67■■□□□ 1.06
MRPL28-209ENST00000481453 KLRK1P26718 216 aa21.67■■□□□ 1.06
MRPL28-209ENST00000481453 LARP1BQ659C4 914 aaKnown RBP21.67■■□□□ 1.06
MRPL28-209ENST00000481453 EPB41L4AQ9HCS5 686 aaPredicted RBP21.67■■□□□ 1.06
MRPL28-209ENST00000481453 ANTXR2P58335 489 aa21.66■■□□□ 1.06
MRPL28-209ENST00000481453 ALX1Q15699 326 aa21.66■■□□□ 1.06
MRPL28-209ENST00000481453 TBC1D10CQ8IV04 446 aa21.66■■□□□ 1.06
MRPL28-209ENST00000481453 GPHNQ9NQX3 736 aaPredicted RBP21.66■■□□□ 1.06
MRPL28-209ENST00000481453 ZMYM6O95789 1325 aa21.66■■□□□ 1.06
MRPL28-209ENST00000481453 VPS37CA5D8V6 355 aaPredicted RBP21.65■■□□□ 1.06
MRPL28-209ENST00000481453 PTMAP06454 111 aaKnown RBP21.65■■□□□ 1.06
MRPL28-209ENST00000481453 EVCP57679 992 aa21.65■■□□□ 1.06
MRPL28-209ENST00000481453 FBXO33Q7Z6M2 555 aa21.65■■□□□ 1.06
MRPL28-209ENST00000481453 GYS1P13807 737 aa21.65■■□□□ 1.06
MRPL28-209ENST00000481453 DNM1Q05193 864 aaKnown RBP21.65■■□□□ 1.06
MRPL28-209ENST00000481453 CDC37L1Q7L3B6 337 aa21.65■■□□□ 1.06
MRPL28-209ENST00000481453 SMARCC2Q8TAQ2 1214 aa21.65■■□□□ 1.06
MRPL28-209ENST00000481453 NKX2-3Q8TAU0 364 aa21.65■■□□□ 1.06
MRPL28-209ENST00000481453 ARMT1Q9H993 441 aa21.65■■□□□ 1.06
MRPL28-209ENST00000481453 CACNA1SQ13698 1873 aa21.65■■□□□ 1.06
MRPL28-209ENST00000481453 CTDNEP1O95476 244 aa21.64■■□□□ 1.06
MRPL28-209ENST00000481453 PDCP20941 246 aa21.64■■□□□ 1.06
MRPL28-209ENST00000481453 UVSSAQ2YD98 709 aa21.64■■□□□ 1.06
MRPL28-209ENST00000481453 NCOA7Q8NI08 942 aa21.64■■□□□ 1.06
MRPL28-209ENST00000481453 GNL3LQ9NVN8 582 aaKnown RBP21.64■■□□□ 1.06
MRPL28-209ENST00000481453 DENND2AQ9ULE3 1009 aa21.64■■□□□ 1.06
MRPL28-209ENST00000481453 PATL2C9JE40 543 aaKnown RBP21.64■■□□□ 1.05
MRPL28-209ENST00000481453 APPP05067 770 aa21.64■■□□□ 1.05
MRPL28-209ENST00000481453 PDIA3P30101 505 aaKnown RBP21.64■■□□□ 1.05
MRPL28-209ENST00000481453 CAVIN4Q5BKX8 364 aa21.64■■□□□ 1.05
MRPL28-209ENST00000481453 CNBD1Q8NA66 436 aa21.64■■□□□ 1.05
MRPL28-209ENST00000481453 ZNF274Q96GC6 653 aaPredicted RBP21.64■■□□□ 1.05
MRPL28-209ENST00000481453 LRP2BPQ9P2M1 347 aa21.64■■□□□ 1.05
MRPL28-209ENST00000481453 PNPLA7Q6ZV29 1317 aa21.64■■□□□ 1.05
MRPL28-209ENST00000481453 PRC1O43663 620 aa21.63■■□□□ 1.05
MRPL28-209ENST00000481453 PDIA4P13667 645 aaKnown RBP21.63■■□□□ 1.05
MRPL28-209ENST00000481453 PRR5LQ6MZQ0 368 aa21.63■■□□□ 1.05
MRPL28-209ENST00000481453 PROM2Q8N271 834 aa21.63■■□□□ 1.05
MRPL28-209ENST00000481453 LCORLQ8N3X6 602 aa21.63■■□□□ 1.05
MRPL28-209ENST00000481453 NSUN7Q8NE18 718 aaKnown RBP21.63■■□□□ 1.05
MRPL28-209ENST00000481453 LLPHQ9BRT6 129 aaKnown RBP21.63■■□□□ 1.05
MRPL28-209ENST00000481453 ANKRD2Q9GZV1 360 aa21.63■■□□□ 1.05
MRPL28-209ENST00000481453 IRS2Q9Y4H2 1338 aa21.63■■□□□ 1.05
MRPL28-209ENST00000481453 GSG1L2A8MUP6 293 aa21.63■■□□□ 1.05
MRPL28-209ENST00000481453 ADGRA1Q86SQ6 560 aa21.63■■□□□ 1.05
MRPL28-209ENST00000481453 SLC51AQ86UW1 340 aa21.63■■□□□ 1.05
MRPL28-209ENST00000481453 TIAM2Q8IVF5 1701 aa21.63■■□□□ 1.05
MRPL28-209ENST00000481453 WDR19Q8NEZ3 1342 aa21.63■■□□□ 1.05
MRPL28-209ENST00000481453 IFNL3Q8IZI9 196 aa21.62■■□□□ 1.05
MRPL28-209ENST00000481453 SALL1Q9NSC2 1324 aa21.61■■□□□ 1.05
MRPL28-209ENST00000481453 NPHP1O15259 732 aa21.61■■□□□ 1.05
MRPL28-209ENST00000481453 PRKAB2O43741 272 aa21.61■■□□□ 1.05
MRPL28-209ENST00000481453 CCT2P78371 535 aaKnown RBP21.61■■□□□ 1.05
MRPL28-209ENST00000481453 RALYLQ86SE5 291 aaKnown RBP21.61■■□□□ 1.05
MRPL28-209ENST00000481453 NCOA5Q9HCD5 579 aaKnown RBP21.61■■□□□ 1.05
MRPL28-209ENST00000481453 MYH13Q9UKX3 1938 aa21.61■■□□□ 1.05
MRPL28-209ENST00000481453 VPS37DQ86XT2 251 aa21.6■■□□□ 1.05
MRPL28-209ENST00000481453 ABCF2Q9UG63 623 aa21.6■■□□□ 1.05
MRPL28-209ENST00000481453 CYP7A1P22680 504 aa21.6■■□□□ 1.05
MRPL28-209ENST00000481453 GRAPQ13588 217 aa21.6■■□□□ 1.05
MRPL28-209ENST00000481453 TXNRD1Q16881 649 aa21.6■■□□□ 1.05
MRPL28-209ENST00000481453 MIGA1Q8NAN2 632 aa21.6■■□□□ 1.05
MRPL28-209ENST00000481453 GRAPLQ8TC17 118 aaPredicted RBP21.6■■□□□ 1.05
MRPL28-209ENST00000481453 ZNF384Q8TF68 577 aa21.6■■□□□ 1.05
MRPL28-209ENST00000481453 DDX11Q96FC9 970 aa21.6■■□□□ 1.05
MRPL28-209ENST00000481453 R3HCC1Q9Y3T6 440 aaKnown RBP21.6■■□□□ 1.05
MRPL28-209ENST00000481453 TACC3Q9Y6A5 838 aa21.6■■□□□ 1.05
MRPL28-209ENST00000481453 CHD4Q14839 1912 aa21.6■■□□□ 1.05
MRPL28-209ENST00000481453 NEDD4P46934 1319 aa21.59■■□□□ 1.05
MRPL28-209ENST00000481453 PDS5AQ29RF7 1337 aaKnown RBP21.59■■□□□ 1.05
MRPL28-209ENST00000481453 SEMA3EO15041 775 aa21.59■■□□□ 1.05
MRPL28-209ENST00000481453 HSP90AA2PQ14568 343 aaPredicted RBP21.59■■□□□ 1.05
MRPL28-209ENST00000481453 CYB5R4Q7L1T6 521 aa21.59■■□□□ 1.05
MRPL28-209ENST00000481453 TFCP2L1Q9NZI6 479 aa21.59■■□□□ 1.05
MRPL28-209ENST00000481453 USP25Q9UHP3 1055 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms