RNA–Protein interactions for RNA: ENST00000480624.5

MACF1-217, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-217ENST00000480624 VPS53Q5VIR6 699 aa13.58□□□□□ -0.24
MACF1-217ENST00000480624 TMED8Q6PL24 325 aaPredicted RBP13.58□□□□□ -0.24
MACF1-217ENST00000480624 CERS5Q8N5B7 392 aa13.58□□□□□ -0.24
MACF1-217ENST00000480624 TBC1D22AQ8WUA7 517 aa13.58□□□□□ -0.24
MACF1-217ENST00000480624 COL4A5P29400 1685 aa13.57□□□□□ -0.24
MACF1-217ENST00000480624 MYH13Q9UKX3 1938 aa13.57□□□□□ -0.24
MACF1-217ENST00000480624 YDJCA8MPS7 323 aa13.57□□□□□ -0.24
MACF1-217ENST00000480624 GPAA1O43292 621 aa13.57□□□□□ -0.24
MACF1-217ENST00000480624 NECTIN1Q15223 517 aa13.57□□□□□ -0.24
MACF1-217ENST00000480624 MFSD14BQ5SR56 506 aa13.57□□□□□ -0.24
MACF1-217ENST00000480624 TTLL5Q6EMB2 1281 aa13.57□□□□□ -0.24
MACF1-217ENST00000480624 NAA16Q6N069 864 aaPredicted RBP13.57□□□□□ -0.24
MACF1-217ENST00000480624 KCNB2Q92953 911 aa13.57□□□□□ -0.24
MACF1-217ENST00000480624 IL17RAQ96F46 866 aa13.57□□□□□ -0.24
MACF1-217ENST00000480624 STRBPQ96SI9 672 aaKnown RBP13.57□□□□□ -0.24
MACF1-217ENST00000480624 SYT17Q9BSW7 474 aa13.57□□□□□ -0.24
MACF1-217ENST00000480624 PALD1Q9ULE6 856 aa13.57□□□□□ -0.24
MACF1-217ENST00000480624 RBM8AQ9Y5S9 174 aaKnown RBP13.57□□□□□ -0.24
MACF1-217ENST00000480624 MYH7P12883 1935 aa13.56□□□□□ -0.24
MACF1-217ENST00000480624 CHD4Q14839 1912 aa13.56□□□□□ -0.24
MACF1-217ENST00000480624 MBD4O95243 580 aa13.56□□□□□ -0.24
MACF1-217ENST00000480624 HSPD1P10809 573 aaKnown RBP13.56□□□□□ -0.24
MACF1-217ENST00000480624 DACT2Q5SW24 774 aa13.56□□□□□ -0.24
MACF1-217ENST00000480624 STRIP1Q5VSL9 837 aa13.56□□□□□ -0.24
MACF1-217ENST00000480624 LARGE2Q8N3Y3 721 aa13.56□□□□□ -0.24
MACF1-217ENST00000480624 RIOK1Q9BRS2 568 aaKnown RBP13.56□□□□□ -0.24
MACF1-217ENST00000480624 DSCC1Q9BVC3 393 aa13.56□□□□□ -0.24
MACF1-217ENST00000480624 MXD3Q9BW11 206 aa13.56□□□□□ -0.24
MACF1-217ENST00000480624 TAOK3Q9H2K8 898 aa13.56□□□□□ -0.24
MACF1-217ENST00000480624 ARMT1Q9H993 441 aa13.56□□□□□ -0.24
MACF1-217ENST00000480624 LTBP3Q9NS15 1303 aa13.56□□□□□ -0.24
MACF1-217ENST00000480624 FER1L6Q2WGJ9 1857 aa13.55□□□□□ -0.24
MACF1-217ENST00000480624 IARSP41252 1262 aaKnown RBP13.55□□□□□ -0.24
MACF1-217ENST00000480624 PRELPP51888 382 aa13.55□□□□□ -0.24
MACF1-217ENST00000480624 FKBP1AP62942 108 aaKnown RBP13.55□□□□□ -0.24
MACF1-217ENST00000480624 DZIP1Q86YF9 867 aaKnown RBP13.55□□□□□ -0.24
MACF1-217ENST00000480624 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
MACF1-217ENST00000480624 LCORLQ8N3X6 602 aa13.55□□□□□ -0.24
MACF1-217ENST00000480624 MIGA1Q8NAN2 632 aa13.55□□□□□ -0.24
MACF1-217ENST00000480624 FBXW7Q969H0 707 aa13.55□□□□□ -0.24
MACF1-217ENST00000480624 AIDAQ96BJ3 306 aa13.55□□□□□ -0.24
MACF1-217ENST00000480624 SUGT1Q9Y2Z0 365 aa13.55□□□□□ -0.24
MACF1-217ENST00000480624 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
MACF1-217ENST00000480624 MAST2Q6P0Q8 1798 aa13.54□□□□□ -0.24
MACF1-217ENST00000480624 MAGEB6P1A0A0J9YX57 407 aa13.54□□□□□ -0.24
MACF1-217ENST00000480624 USP17L3A6NCW0 530 aa13.54□□□□□ -0.24
MACF1-217ENST00000480624 USP17L4A6NCW7 530 aa13.54□□□□□ -0.24
MACF1-217ENST00000480624 MCCP23508 829 aa13.54□□□□□ -0.24
MACF1-217ENST00000480624 ANAPC15P60006 121 aa13.54□□□□□ -0.24
MACF1-217ENST00000480624 DYNLL1P63167 89 aaKnown RBP13.54□□□□□ -0.24
MACF1-217ENST00000480624 GSTO1P78417 241 aa13.54□□□□□ -0.24
MACF1-217ENST00000480624 DIXDC1Q155Q3 683 aa13.54□□□□□ -0.24
MACF1-217ENST00000480624 CREB3L3Q68CJ9 461 aa13.54□□□□□ -0.24
MACF1-217ENST00000480624 USP17L1Q7RTZ2 530 aa13.54□□□□□ -0.24
MACF1-217ENST00000480624 FAM163AQ96GL9 167 aaPredicted RBP13.54□□□□□ -0.24
MACF1-217ENST00000480624 SNX14Q9Y5W7 946 aa13.54□□□□□ -0.24
MACF1-217ENST00000480624 ZNF646O15015 1829 aaPredicted RBP13.53□□□□□ -0.24
MACF1-217ENST00000480624 ARFGEF1Q9Y6D6 1849 aa13.53□□□□□ -0.24
MACF1-217ENST00000480624 SLC27A2O14975 620 aa13.53□□□□□ -0.24
MACF1-217ENST00000480624 PRKAB2O43741 272 aa13.53□□□□□ -0.24
MACF1-217ENST00000480624 LDHCP07864 332 aa13.53□□□□□ -0.24
MACF1-217ENST00000480624 RASSF7Q02833 373 aa13.53□□□□□ -0.24
MACF1-217ENST00000480624 ALX1Q15699 326 aa13.53□□□□□ -0.24
MACF1-217ENST00000480624 ZNRF3Q9ULT6 936 aa13.53□□□□□ -0.24
MACF1-217ENST00000480624 SCN9AQ15858 1988 aa13.52□□□□□ -0.24
MACF1-217ENST00000480624 GSG1L2A8MUP6 293 aa13.52□□□□□ -0.25
MACF1-217ENST00000480624 PATL2C9JE40 543 aaKnown RBP13.52□□□□□ -0.25
MACF1-217ENST00000480624 FGAP02671 866 aa13.52□□□□□ -0.25
MACF1-217ENST00000480624 PPP4CP60510 307 aa13.52□□□□□ -0.25
MACF1-217ENST00000480624 NIM1KQ8IY84 436 aa13.52□□□□□ -0.25
MACF1-217ENST00000480624 EPB41L4AQ9HCS5 686 aaPredicted RBP13.52□□□□□ -0.25
MACF1-217ENST00000480624 TAF6LQ9Y6J9 622 aa13.52□□□□□ -0.25
MACF1-217ENST00000480624 MROH7-TTC4A0A0A0MT08 1334 aa13.52□□□□□ -0.25
MACF1-217ENST00000480624 GAKO14976 1311 aa13.52□□□□□ -0.25
MACF1-217ENST00000480624 GPR75-ASB3A0A0A6YYF3 556 aa13.51□□□□□ -0.25
MACF1-217ENST00000480624 RAD17O75943 681 aa13.51□□□□□ -0.25
MACF1-217ENST00000480624 CYP21A2P08686 494 aa13.51□□□□□ -0.25
MACF1-217ENST00000480624 VIL1P09327 827 aaKnown RBP13.51□□□□□ -0.25
MACF1-217ENST00000480624 GNAT2P19087 354 aa13.51□□□□□ -0.25
MACF1-217ENST00000480624 ANP32AP39687 249 aaKnown RBP13.51□□□□□ -0.25
MACF1-217ENST00000480624 TSGA10IPQ3SY00 556 aa13.51□□□□□ -0.25
MACF1-217ENST00000480624 IFNL3Q8IZI9 196 aa13.51□□□□□ -0.25
MACF1-217ENST00000480624 MRIQ9BWK5 157 aa13.51□□□□□ -0.25
MACF1-217ENST00000480624 AATFQ9NY61 560 aaKnown RBP eCLIP13.51□□□□□ -0.25
MACF1-217ENST00000480624 TTF2Q9UNY4 1162 aaKnown RBP13.51□□□□□ -0.25
MACF1-217ENST00000480624 DAGLAQ9Y4D2 1042 aa13.51□□□□□ -0.25
MACF1-217ENST00000480624 SLC4A4Q9Y6R1 1079 aa13.51□□□□□ -0.25
MACF1-217ENST00000480624 RPAP1Q9BWH6 1393 aaPredicted RBP13.5□□□□□ -0.25
MACF1-217ENST00000480624 F8W031 263 aaPredicted RBP13.5□□□□□ -0.25
MACF1-217ENST00000480624 PSMD14O00487 310 aa13.5□□□□□ -0.25
MACF1-217ENST00000480624 YBX3P16989 372 aaKnown RBP eCLIP13.5□□□□□ -0.25
MACF1-217ENST00000480624 CXCL9Q07325 125 aa13.5□□□□□ -0.25
MACF1-217ENST00000480624 RABEP1Q15276 862 aa13.5□□□□□ -0.25
MACF1-217ENST00000480624 RNF20Q5VTR2 975 aa13.5□□□□□ -0.25
MACF1-217ENST00000480624 ARHGAP27Q6ZUM4 889 aa13.5□□□□□ -0.25
MACF1-217ENST00000480624 SLF2Q8IX21 1173 aa13.5□□□□□ -0.25
MACF1-217ENST00000480624 GMLQ99445 158 aa13.5□□□□□ -0.25
MACF1-217ENST00000480624 CTNNA3Q9UI47 895 aa13.5□□□□□ -0.25
MACF1-217ENST00000480624 CCDC88AQ3V6T2 1871 aa13.49□□□□□ -0.25
MACF1-217ENST00000480624 ZMYM6O95789 1325 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms