RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 MAGEB6Q8N7X4 407 aa7.77□□□□□ -1.17
HERC4-210ENST00000480158 SEC62Q99442 399 aaKnown RBP7.77□□□□□ -1.17
HERC4-210ENST00000480158 DIAPH3Q9NSV4 1193 aa7.77□□□□□ -1.17
HERC4-210ENST00000480158 RNF181Q9P0P0 153 aa7.77□□□□□ -1.17
HERC4-210ENST00000480158 ZNRF3Q9ULT6 936 aa7.77□□□□□ -1.17
HERC4-210ENST00000480158 GJA3Q9Y6H8 435 aa7.77□□□□□ -1.17
HERC4-210ENST00000480158 USP17L3A6NCW0 530 aa7.77□□□□□ -1.17
HERC4-210ENST00000480158 USP17L4A6NCW7 530 aa7.77□□□□□ -1.17
HERC4-210ENST00000480158 PSMD14O00487 310 aa7.77□□□□□ -1.17
HERC4-210ENST00000480158 SEMA3EO15041 775 aa7.77□□□□□ -1.17
HERC4-210ENST00000480158 LMNB1P20700 586 aa7.77□□□□□ -1.17
HERC4-210ENST00000480158 SCNN1DP51172 638 aa7.77□□□□□ -1.17
HERC4-210ENST00000480158 TTF1Q15361 905 aaPredicted RBP7.77□□□□□ -1.17
HERC4-210ENST00000480158 DIXDC1Q155Q3 683 aa7.77□□□□□ -1.17
HERC4-210ENST00000480158 USP17L1Q7RTZ2 530 aa7.77□□□□□ -1.17
HERC4-210ENST00000480158 CERS5Q8N5B7 392 aa7.77□□□□□ -1.17
HERC4-210ENST00000480158 WDR66Q8TBY9 1149 aa7.77□□□□□ -1.17
HERC4-210ENST00000480158 ARAP2Q8WZ64 1704 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 CDC45O75419 566 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 LDHBP07195 334 aaKnown RBP7.76□□□□□ -1.17
HERC4-210ENST00000480158 CHMLP26374 656 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 MECOMQ03112 1051 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 CXCL9Q07325 125 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 MAP3K12Q12852 859 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 NMIQ13287 307 aaPredicted RBP7.76□□□□□ -1.17
HERC4-210ENST00000480158 C9orf131Q5VYM1 1079 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 DZIP1Q86YF9 867 aaKnown RBP7.76□□□□□ -1.17
HERC4-210ENST00000480158 MIGA1Q8NAN2 632 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 IL25Q9H293 177 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 ZNF532Q9HCE3 1301 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 A0A0D9SFI3 127 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 SEC24BO95487 1268 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 CHRM1P11229 460 aaPredicted RBP7.76□□□□□ -1.17
HERC4-210ENST00000480158 PDE6AP16499 860 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 C8orf34Q49A92 452 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 DACT2Q5SW24 774 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 CCDC129Q6ZRS4 1044 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.76□□□□□ -1.17
HERC4-210ENST00000480158 ADGRA1Q86SQ6 560 aa7.76□□□□□ -1.17
HERC4-210ENST00000480158 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.76□□□□□ -1.17
HERC4-210ENST00000480158 TTF2Q9UNY4 1162 aaKnown RBP7.76□□□□□ -1.17
HERC4-210ENST00000480158 LTBP3Q9NS15 1303 aa7.75□□□□□ -1.17
HERC4-210ENST00000480158 RNF113AO15541 343 aaKnown RBP7.75□□□□□ -1.17
HERC4-210ENST00000480158 CYP7A1P22680 504 aa7.75□□□□□ -1.17
HERC4-210ENST00000480158 RBM5P52756 815 aaKnown RBP eCLIP7.75□□□□□ -1.17
HERC4-210ENST00000480158 STRIP1Q5VSL9 837 aa7.75□□□□□ -1.17
HERC4-210ENST00000480158 NAA16Q6N069 864 aaPredicted RBP7.75□□□□□ -1.17
HERC4-210ENST00000480158 CASC1Q6TDU7 716 aa7.75□□□□□ -1.17
HERC4-210ENST00000480158 ZNF384Q8TF68 577 aa7.75□□□□□ -1.17
HERC4-210ENST00000480158 FER1L6Q2WGJ9 1857 aa7.75□□□□□ -1.17
HERC4-210ENST00000480158 FAM205AQ6ZU69 1335 aa7.75□□□□□ -1.17
HERC4-210ENST00000480158 ZNF541Q9H0D2 1346 aa7.75□□□□□ -1.17
HERC4-210ENST00000480158 AKAP11Q9UKA4 1901 aa7.74□□□□□ -1.17
HERC4-210ENST00000480158 GRIN3BO60391 1043 aa7.74□□□□□ -1.17
HERC4-210ENST00000480158 MFAP1P55081 439 aaKnown RBP7.74□□□□□ -1.17
HERC4-210ENST00000480158 EIF6P56537 245 aaKnown RBP7.74□□□□□ -1.17
HERC4-210ENST00000480158 CIAPIN1Q6FI81 312 aa7.74□□□□□ -1.17
HERC4-210ENST00000480158 ZGPATQ8N5A5 531 aaKnown RBP7.74□□□□□ -1.17
HERC4-210ENST00000480158 TBC1D22AQ8WUA7 517 aa7.74□□□□□ -1.17
HERC4-210ENST00000480158 NSUN4Q96CB9 384 aaKnown RBP7.74□□□□□ -1.17
HERC4-210ENST00000480158 PUS7LQ9H0K6 701 aaKnown RBP7.74□□□□□ -1.17
HERC4-210ENST00000480158 VPS33BQ9H267 617 aa7.74□□□□□ -1.17
HERC4-210ENST00000480158 PCDHAC2Q9Y5I4 1007 aa7.74□□□□□ -1.17
HERC4-210ENST00000480158 CHD4Q14839 1912 aa7.74□□□□□ -1.17
HERC4-210ENST00000480158 ARFGEF1Q9Y6D6 1849 aa7.74□□□□□ -1.17
HERC4-210ENST00000480158 SHTN1A0MZ66 631 aa7.74□□□□□ -1.17
HERC4-210ENST00000480158 M0R2C6 588 aa7.74□□□□□ -1.17
HERC4-210ENST00000480158 ADD2P35612 726 aa7.74□□□□□ -1.17
HERC4-210ENST00000480158 SPTY2D1Q68D10 685 aaPredicted RBP7.74□□□□□ -1.17
HERC4-210ENST00000480158 OSBP2Q969R2 916 aa7.74□□□□□ -1.17
HERC4-210ENST00000480158 AATFQ9NY61 560 aaKnown RBP eCLIP7.74□□□□□ -1.17
HERC4-210ENST00000480158 FZD9O00144 591 aa7.73□□□□□ -1.17
HERC4-210ENST00000480158 DDNO94850 711 aaPredicted RBP7.73□□□□□ -1.17
HERC4-210ENST00000480158 DYNLL1P63167 89 aaKnown RBP7.73□□□□□ -1.17
HERC4-210ENST00000480158 RBM26Q5T8P6 1007 aaKnown RBP7.73□□□□□ -1.17
HERC4-210ENST00000480158 ZSCAN25Q6NSZ9 544 aa7.73□□□□□ -1.17
HERC4-210ENST00000480158 RSBN1LQ6PCB5 846 aaPredicted RBP7.73□□□□□ -1.17
HERC4-210ENST00000480158 ZNF589Q86UQ0 364 aaPredicted RBP7.73□□□□□ -1.17
HERC4-210ENST00000480158 STK24Q9Y6E0 443 aa7.73□□□□□ -1.17
HERC4-210ENST00000480158 SCN9AQ15858 1988 aa7.73□□□□□ -1.17
HERC4-210ENST00000480158 PDS5AQ29RF7 1337 aaKnown RBP7.73□□□□□ -1.17
HERC4-210ENST00000480158 SALL1Q9NSC2 1324 aa7.73□□□□□ -1.17
HERC4-210ENST00000480158 TCRBV5S4A2TA0A5A2 114 aa7.73□□□□□ -1.17
HERC4-210ENST00000480158 VIL1P09327 827 aaKnown RBP7.73□□□□□ -1.17
HERC4-210ENST00000480158 TNIP1Q15025 636 aa7.73□□□□□ -1.17
HERC4-210ENST00000480158 LRRFIP1Q32MZ4 808 aaKnown RBP7.73□□□□□ -1.17
HERC4-210ENST00000480158 ESYT1Q9BSJ8 1104 aa7.73□□□□□ -1.17
HERC4-210ENST00000480158 ARMT1Q9H993 441 aa7.73□□□□□ -1.17
HERC4-210ENST00000480158 ANO2Q9NQ90 1003 aa7.73□□□□□ -1.17
HERC4-210ENST00000480158 MAST3O60307 1309 aa7.73□□□□□ -1.17
HERC4-210ENST00000480158 HIP1O00291 1037 aa7.72□□□□□ -1.17
HERC4-210ENST00000480158 MBD4O95243 580 aa7.72□□□□□ -1.17
HERC4-210ENST00000480158 APPP05067 770 aa7.72□□□□□ -1.17
HERC4-210ENST00000480158 ZFYP08048 801 aaPredicted RBP7.72□□□□□ -1.17
HERC4-210ENST00000480158 GMPSP49915 693 aaPredicted RBP7.72□□□□□ -1.17
HERC4-210ENST00000480158 MCMDC2Q4G0Z9 681 aa7.72□□□□□ -1.17
HERC4-210ENST00000480158 ZMYM1Q5SVZ6 1142 aa7.72□□□□□ -1.17
HERC4-210ENST00000480158 VPS53Q5VIR6 699 aa7.72□□□□□ -1.17
HERC4-210ENST00000480158 OGFOD1Q8N543 542 aa7.72□□□□□ -1.17
HERC4-210ENST00000480158 RUFY2Q8WXA3 655 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms