RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 TXNRD1Q16881 649 aa12.58□□□□□ -0.4
CHD6-208ENST00000480022 FAM173BQ6P4H8 233 aa12.58□□□□□ -0.4
CHD6-208ENST00000480022 CCDC150Q8NCX0 1101 aa12.58□□□□□ -0.4
CHD6-208ENST00000480022 CEP89Q96ST8 783 aa12.58□□□□□ -0.4
CHD6-208ENST00000480022 LRRCC1Q9C099 1032 aa12.58□□□□□ -0.4
CHD6-208ENST00000480022 HYPKQ9NX55 129 aa12.58□□□□□ -0.4
CHD6-208ENST00000480022 SOS1Q07889 1333 aaPredicted RBP12.58□□□□□ -0.4
CHD6-208ENST00000480022 CCP110O43303 1012 aa12.58□□□□□ -0.4
CHD6-208ENST00000480022 DTNBO60941 627 aa12.58□□□□□ -0.4
CHD6-208ENST00000480022 CPP00450 1065 aa12.58□□□□□ -0.4
CHD6-208ENST00000480022 GNAI3P08754 354 aa12.58□□□□□ -0.4
CHD6-208ENST00000480022 EIF2S2P20042 333 aaKnown RBP12.58□□□□□ -0.4
CHD6-208ENST00000480022 DEFB132Q7Z7B7 95 aa12.58□□□□□ -0.4
CHD6-208ENST00000480022 NECTIN2Q92692 538 aa12.58□□□□□ -0.4
CHD6-208ENST00000480022 CAMKK2Q96RR4 588 aa12.58□□□□□ -0.4
CHD6-208ENST00000480022 ZSCAN16Q9H4T2 348 aaPredicted RBP12.58□□□□□ -0.4
CHD6-208ENST00000480022 MKRN1Q9UHC7 482 aaKnown RBP12.58□□□□□ -0.4
CHD6-208ENST00000480022 TTC41PQ6P2S7 1318 aa12.58□□□□□ -0.4
CHD6-208ENST00000480022 H3BQF6 201 aa12.57□□□□□ -0.4
CHD6-208ENST00000480022 URI1O94763 535 aaPredicted RBP12.57□□□□□ -0.4
CHD6-208ENST00000480022 SMC2O95347 1197 aa12.57□□□□□ -0.4
CHD6-208ENST00000480022 SLC27A3Q5K4L6 730 aa12.57□□□□□ -0.4
CHD6-208ENST00000480022 RASEFQ8IZ41 740 aa12.57□□□□□ -0.4
CHD6-208ENST00000480022 LEO1Q8WVC0 666 aaPredicted RBP12.57□□□□□ -0.4
CHD6-208ENST00000480022 TEX13AQ9BXU3 409 aaPredicted RBP12.57□□□□□ -0.4
CHD6-208ENST00000480022 BAG6P46379 1132 aa12.57□□□□□ -0.4
CHD6-208ENST00000480022 EZH2Q15910 746 aaKnown RBP12.57□□□□□ -0.4
CHD6-208ENST00000480022 HDGFL1Q5TGJ6 251 aa12.57□□□□□ -0.4
CHD6-208ENST00000480022 CDC37L1Q7L3B6 337 aa12.57□□□□□ -0.4
CHD6-208ENST00000480022 LINC00116Q8NCU8 138 aa12.57□□□□□ -0.4
CHD6-208ENST00000480022 STAP2Q9UGK3 403 aa12.57□□□□□ -0.4
CHD6-208ENST00000480022 CYP19A1P11511 503 aaPredicted RBP12.57□□□□□ -0.4
CHD6-208ENST00000480022 MED4Q9NPJ6 270 aa12.57□□□□□ -0.4
CHD6-208ENST00000480022 TFIP11Q9UBB9 837 aaKnown RBP12.57□□□□□ -0.4
CHD6-208ENST00000480022 SUFUQ9UMX1 484 aa12.57□□□□□ -0.4
CHD6-208ENST00000480022 STARD3NLO95772 234 aa12.56□□□□□ -0.4
CHD6-208ENST00000480022 MAP2K2P36507 400 aa12.56□□□□□ -0.4
CHD6-208ENST00000480022 SATB1Q01826 763 aa12.56□□□□□ -0.4
CHD6-208ENST00000480022 DHX8Q14562 1220 aaKnown RBP12.56□□□□□ -0.4
CHD6-208ENST00000480022 FOXR1Q6PIV2 292 aa12.56□□□□□ -0.4
CHD6-208ENST00000480022 ANKRD20A12PQ8NF67 263 aa12.56□□□□□ -0.4
CHD6-208ENST00000480022 EPC1Q9H2F5 836 aa12.56□□□□□ -0.4
CHD6-208ENST00000480022 PDRG1Q9NUG6 133 aa12.56□□□□□ -0.4
CHD6-208ENST00000480022 VPS18Q9P253 973 aa12.56□□□□□ -0.4
CHD6-208ENST00000480022 LY75O60449 1722 aa12.56□□□□□ -0.4
CHD6-208ENST00000480022 C5P01031 1676 aa12.56□□□□□ -0.4
CHD6-208ENST00000480022 CPA1P15085 419 aa12.56□□□□□ -0.4
CHD6-208ENST00000480022 PDCP20941 246 aa12.56□□□□□ -0.4
CHD6-208ENST00000480022 SFPQP23246 707 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHD6-208ENST00000480022 ZRSR1Q15695 479 aaKnown RBP12.56□□□□□ -0.4
CHD6-208ENST00000480022 EFCAB13Q8IY85 973 aa12.56□□□□□ -0.4
CHD6-208ENST00000480022 MAFGO15525 162 aa12.55□□□□□ -0.4
CHD6-208ENST00000480022 A1BGP04217 495 aa12.55□□□□□ -0.4
CHD6-208ENST00000480022 GNL2Q13823 731 aaKnown RBP12.55□□□□□ -0.4
CHD6-208ENST00000480022 VPS53Q5VIR6 699 aa12.55□□□□□ -0.4
CHD6-208ENST00000480022 NBPF11Q86T75 865 aa12.55□□□□□ -0.4
CHD6-208ENST00000480022 DHX40Q8IX18 779 aaKnown RBP12.55□□□□□ -0.4
CHD6-208ENST00000480022 TJP1Q07157 1748 aa12.55□□□□□ -0.4
CHD6-208ENST00000480022 CTAGE5O15320 804 aa12.55□□□□□ -0.4
CHD6-208ENST00000480022 SGSM2O43147 1006 aa12.55□□□□□ -0.4
CHD6-208ENST00000480022 CCDC30Q5VVM6 783 aa12.55□□□□□ -0.4
CHD6-208ENST00000480022 ARMCX5Q6P1M9 558 aa12.55□□□□□ -0.4
CHD6-208ENST00000480022 PGBD1Q96JS3 809 aa12.55□□□□□ -0.4
CHD6-208ENST00000480022 ZNF831Q5JPB2 1677 aa12.54□□□□□ -0.4
CHD6-208ENST00000480022 CICQ96RK0 1608 aaPredicted RBP12.54□□□□□ -0.4
CHD6-208ENST00000480022 AOX1Q06278 1338 aa12.54□□□□□ -0.4
CHD6-208ENST00000480022 CRKLP46109 303 aaKnown RBP12.54□□□□□ -0.4
CHD6-208ENST00000480022 PIP4K2AP48426 406 aaPredicted RBP12.54□□□□□ -0.4
CHD6-208ENST00000480022 ST3GAL1Q11201 340 aa12.54□□□□□ -0.4
CHD6-208ENST00000480022 PDIA6Q15084 440 aa12.54□□□□□ -0.4
CHD6-208ENST00000480022 LONRF2Q1L5Z9 754 aa12.54□□□□□ -0.4
CHD6-208ENST00000480022 JAKMIP3Q5VZ66 844 aa12.54□□□□□ -0.4
CHD6-208ENST00000480022 PARD6BQ9BYG5 372 aa12.54□□□□□ -0.4
CHD6-208ENST00000480022 LSG1Q9H089 658 aaKnown RBP12.54□□□□□ -0.4
CHD6-208ENST00000480022 PARP3Q9Y6F1 533 aa12.54□□□□□ -0.4
CHD6-208ENST00000480022 MAP2K7O14733 419 aa12.54□□□□□ -0.4
CHD6-208ENST00000480022 INTS5Q6P9B9 1019 aaKnown RBP12.54□□□□□ -0.4
CHD6-208ENST00000480022 TRIM65Q6PJ69 517 aa12.54□□□□□ -0.4
CHD6-208ENST00000480022 CHPF2Q9P2E5 772 aa12.54□□□□□ -0.4
CHD6-208ENST00000480022 NBPF26B4DH59 902 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 TDO2P48775 406 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 PROSER3Q2NL68 480 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 NBPF14Q5TI25 921 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 NBPF10Q6P3W6 841 aaKnown RBP12.53□□□□□ -0.4
CHD6-208ENST00000480022 NBPF15Q8N660 670 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 CEP120Q8N960 986 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 ANO10Q9NW15 660 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 CCDC196A0A1B0GTZ2 297 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 ANXA1P04083 346 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 APOBRQ0VD83 1088 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 ME3Q16798 604 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 TMC6Q7Z403 805 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 TADA2BQ86TJ2 420 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 NECAB1Q8N987 351 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 DNAAF4Q8WXU2 420 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 RABGGTAQ92696 567 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 CCDC87Q9NVE4 849 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 ZBTB1Q9Y2K1 713 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 RGPD3A6NKT7 1758 aaPredicted RBP12.53□□□□□ -0.4
CHD6-208ENST00000480022 RGPD4Q7Z3J3 1758 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms