RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 CCDC178Q5BJE1 867 aa16.4■□□□□ 0.22
COL20A1-206ENST00000479501 ARMT1Q9H993 441 aa16.4■□□□□ 0.22
COL20A1-206ENST00000479501 MCM9Q9NXL9 1143 aa16.4■□□□□ 0.22
COL20A1-206ENST00000479501 ZNF397Q8NF99 534 aaPredicted RBP16.4■□□□□ 0.22
COL20A1-206ENST00000479501 BMS1Q14692 1282 aaKnown RBP16.39■□□□□ 0.21
COL20A1-206ENST00000479501 ADCK5Q3MIX3 580 aa16.39■□□□□ 0.21
COL20A1-206ENST00000479501 OTUD7BQ6GQQ9 843 aa16.39■□□□□ 0.21
COL20A1-206ENST00000479501 GTF3C6Q969F1 213 aa16.39■□□□□ 0.21
COL20A1-206ENST00000479501 CHAMP1Q96JM3 812 aa16.39■□□□□ 0.21
COL20A1-206ENST00000479501 ANKRD2Q9GZV1 360 aa16.39■□□□□ 0.21
COL20A1-206ENST00000479501 NSFL1CQ9UNZ2 370 aaKnown RBP16.39■□□□□ 0.21
COL20A1-206ENST00000479501 RTL9Q8NET4 1388 aa16.39■□□□□ 0.21
COL20A1-206ENST00000479501 PAXBP1Q9Y5B6 917 aa16.39■□□□□ 0.21
COL20A1-206ENST00000479501 HSP90AA4PQ58FG1 418 aa16.39■□□□□ 0.21
COL20A1-206ENST00000479501 MTMR6Q9Y217 621 aa16.39■□□□□ 0.21
COL20A1-206ENST00000479501 KIF5CO60282 957 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 PCCAP05165 728 aaPredicted RBP16.38■□□□□ 0.21
COL20A1-206ENST00000479501 SNW1Q13573 536 aaKnown RBP16.38■□□□□ 0.21
COL20A1-206ENST00000479501 FKBP15Q5T1M5 1219 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 JAKMIP3Q5VZ66 844 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 DENND2AQ9ULE3 1009 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 LMTK3Q96Q04 1460 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 KIF4BQ2VIQ3 1234 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 KRT222Q8N1A0 295 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 ZBTB38Q8NAP3 1195 aaPredicted RBP16.38■□□□□ 0.21
COL20A1-206ENST00000479501 NUP88Q99567 741 aaPredicted RBP16.38■□□□□ 0.21
COL20A1-206ENST00000479501 CARD10Q9BWT7 1032 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.38■□□□□ 0.21
COL20A1-206ENST00000479501 CUL4AQ13619 759 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 ZNF219Q9P2Y4 722 aaPredicted RBP16.38■□□□□ 0.21
COL20A1-206ENST00000479501 IQGAP1P46940 1657 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 NRXN1Q9ULB1 1477 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 USP31Q70CQ4 1352 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 ZNF532Q9HCE3 1301 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 IDEP14735 1019 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 CALML4Q96GE6 196 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 TIGD1Q96MW7 591 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 PLCD4Q9BRC7 762 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 KIAA1210Q9ULL0 1709 aa16.38■□□□□ 0.21
COL20A1-206ENST00000479501 PTGS1P23219 599 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 AMPD3Q01432 767 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 IQCEQ6IPM2 695 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 ZNF804AQ7Z570 1209 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 CCDC148Q8NFR7 591 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 GNPATO15228 680 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 HSPD1P10809 573 aaKnown RBP16.37■□□□□ 0.21
COL20A1-206ENST00000479501 CTSWP56202 376 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 CLSTN2Q9H4D0 955 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 MROH5Q6ZUA9 1318 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 HLA-DOAP06340 250 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 CEP135Q66GS9 1140 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 GAS2L3Q86XJ1 694 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 FBXO3Q9UK99 471 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 ODF2Q5BJF6 829 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 ANO1Q5XXA6 986 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 SPATA5Q8NB90 893 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 JAG2Q9Y219 1238 aa16.37■□□□□ 0.21
COL20A1-206ENST00000479501 N4BP3O15049 544 aa16.36■□□□□ 0.21
COL20A1-206ENST00000479501 ERLIN2O94905 339 aa16.36■□□□□ 0.21
COL20A1-206ENST00000479501 CALML3P27482 149 aa16.36■□□□□ 0.21
COL20A1-206ENST00000479501 PI4K2BQ8TCG2 481 aa16.36■□□□□ 0.21
COL20A1-206ENST00000479501 DHX58Q96C10 678 aa16.36■□□□□ 0.21
COL20A1-206ENST00000479501 WDR17Q8IZU2 1322 aa16.36■□□□□ 0.21
COL20A1-206ENST00000479501 SASH1O94885 1247 aa16.36■□□□□ 0.21
COL20A1-206ENST00000479501 KRI1Q8N9T8 703 aaKnown RBP16.36■□□□□ 0.21
COL20A1-206ENST00000479501 ASAP1Q9ULH1 1129 aa16.36■□□□□ 0.21
COL20A1-206ENST00000479501 CASQ1P31415 396 aa16.36■□□□□ 0.21
COL20A1-206ENST00000479501 SYCP1Q15431 976 aa16.36■□□□□ 0.21
COL20A1-206ENST00000479501 HEATR3Q7Z4Q2 680 aa16.36■□□□□ 0.21
COL20A1-206ENST00000479501 GOLGA6L7A0A1B0GV03 622 aa16.35■□□□□ 0.21
COL20A1-206ENST00000479501 YEATS4O95619 227 aa16.35■□□□□ 0.21
COL20A1-206ENST00000479501 FGFR1OPO95684 399 aaKnown RBP16.35■□□□□ 0.21
COL20A1-206ENST00000479501 LDHBP07195 334 aaKnown RBP16.35■□□□□ 0.21
COL20A1-206ENST00000479501 GPT2Q8TD30 523 aa16.35■□□□□ 0.21
COL20A1-206ENST00000479501 TSG101Q99816 390 aa16.35■□□□□ 0.21
COL20A1-206ENST00000479501 PRM3Q9NNZ6 103 aa16.35■□□□□ 0.21
COL20A1-206ENST00000479501 AXIN2Q9Y2T1 843 aa16.35■□□□□ 0.21
COL20A1-206ENST00000479501 MTIF2P46199 727 aaKnown RBP16.35■□□□□ 0.21
COL20A1-206ENST00000479501 SPA17Q15506 151 aa16.35■□□□□ 0.21
COL20A1-206ENST00000479501 PUS3Q9BZE2 481 aaKnown RBP16.35■□□□□ 0.21
COL20A1-206ENST00000479501 KRT2P35908 639 aa16.35■□□□□ 0.21
COL20A1-206ENST00000479501 GPR108Q9NPR9 543 aa16.35■□□□□ 0.21
COL20A1-206ENST00000479501 RMND1Q9NWS8 449 aa16.35■□□□□ 0.21
COL20A1-206ENST00000479501 GOLGA6L9A6NEM1 432 aa16.34■□□□□ 0.21
COL20A1-206ENST00000479501 HIBADHP31937 336 aaKnown RBP16.34■□□□□ 0.21
COL20A1-206ENST00000479501 PTPN12Q05209 780 aaKnown RBP16.34■□□□□ 0.21
COL20A1-206ENST00000479501 RILPL1Q5EBL4 403 aa16.34■□□□□ 0.21
COL20A1-206ENST00000479501 RRAGBQ5VZM2 374 aa16.34■□□□□ 0.21
COL20A1-206ENST00000479501 ZNF274Q96GC6 653 aaPredicted RBP16.34■□□□□ 0.21
COL20A1-206ENST00000479501 CCDC94Q9BW85 323 aaPredicted RBP16.34■□□□□ 0.21
COL20A1-206ENST00000479501 ZFYVE27Q5T4F4 411 aa16.34■□□□□ 0.21
COL20A1-206ENST00000479501 ZNF622Q969S3 477 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL20A1-206ENST00000479501 SHTN1A0MZ66 631 aa16.34■□□□□ 0.21
COL20A1-206ENST00000479501 CACNA2D4Q7Z3S7 1137 aa16.34■□□□□ 0.21
COL20A1-206ENST00000479501 ELP1O95163 1332 aa16.34■□□□□ 0.21
COL20A1-206ENST00000479501 DLC1Q96QB1 1528 aa16.33■□□□□ 0.21
COL20A1-206ENST00000479501 SETD1BQ9UPS6 1966 aaKnown RBP16.33■□□□□ 0.21
COL20A1-206ENST00000479501 F8W031 263 aaPredicted RBP16.33■□□□□ 0.21
COL20A1-206ENST00000479501 ADGRB1O14514 1584 aa16.33■□□□□ 0.21
COL20A1-206ENST00000479501 DEXIO95424 95 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms