RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 CCDC172P0C7W6 258 aa15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 OAS2P29728 719 aaKnown RBP15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 HSPA4P34932 840 aa15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 ACTN2P35609 894 aa15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 ZNF165P49910 485 aa15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 KRT85P78386 507 aa15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 DNM1Q05193 864 aaKnown RBP15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 CCDC158Q5M9N0 1113 aa15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 NBPF5PQ86XG9 351 aaPredicted RBP15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 CCDC24Q8N4L8 307 aa15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 UBXN4Q92575 508 aa15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 CLSTN2Q9H4D0 955 aa15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 GPBP1L1Q9HC44 474 aaPredicted RBP15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 LCMT1Q9UIC8 334 aa15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 LIMCH1Q9UPQ0 1083 aa15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 NIP7Q9Y221 180 aaKnown RBP eCLIP15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 MAP3K15Q6ZN16 1313 aa15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 GOLGB1Q14789 3259 aaKnown RBP15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 SWT1Q5T5J6 900 aaKnown RBP15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 C9orf131Q5VYM1 1079 aa15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 PPM1EQ8WY54 764 aa15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 UPF3BQ9BZI7 483 aaKnown RBP15.29■□□□□ 0.04
CNKSR3-204ENST00000479339 CCDC69A6NI79 296 aa15.28■□□□□ 0.04
CNKSR3-204ENST00000479339 GOLGA6L19H0YKK7 550 aa15.28■□□□□ 0.04
CNKSR3-204ENST00000479339 CCP110O43303 1012 aa15.28■□□□□ 0.04
CNKSR3-204ENST00000479339 KIF1CO43896 1103 aaKnown RBP15.28■□□□□ 0.04
CNKSR3-204ENST00000479339 RPS6KA5O75582 802 aa15.28■□□□□ 0.04
CNKSR3-204ENST00000479339 MYL6BP14649 208 aa15.28■□□□□ 0.04
CNKSR3-204ENST00000479339 CASTP20810 708 aaKnown RBP15.28■□□□□ 0.04
CNKSR3-204ENST00000479339 CHMLP26374 656 aa15.28■□□□□ 0.04
CNKSR3-204ENST00000479339 STYK1Q6J9G0 422 aa15.28■□□□□ 0.04
CNKSR3-204ENST00000479339 LEKR1Q6ZMV7 388 aa15.28■□□□□ 0.04
CNKSR3-204ENST00000479339 KIF6Q6ZMV9 814 aa15.28■□□□□ 0.04
CNKSR3-204ENST00000479339 TTLL7Q6ZT98 887 aa15.28■□□□□ 0.04
CNKSR3-204ENST00000479339 LRP10Q7Z4F1 713 aa15.28■□□□□ 0.04
CNKSR3-204ENST00000479339 CHMP4CQ96CF2 233 aa15.28■□□□□ 0.04
CNKSR3-204ENST00000479339 MTMR6Q9Y217 621 aa15.28■□□□□ 0.04
CNKSR3-204ENST00000479339 NPHP1O15259 732 aa15.27■□□□□ 0.04
CNKSR3-204ENST00000479339 PDIA6Q15084 440 aa15.27■□□□□ 0.04
CNKSR3-204ENST00000479339 MNS1Q8NEH6 495 aa15.27■□□□□ 0.04
CNKSR3-204ENST00000479339 TTC14Q96N46 770 aa15.27■□□□□ 0.04
CNKSR3-204ENST00000479339 TMX1Q9H3N1 280 aa15.27■□□□□ 0.04
CNKSR3-204ENST00000479339 PHLPP2Q6ZVD8 1323 aa15.27■□□□□ 0.04
CNKSR3-204ENST00000479339 GYS2P54840 703 aa15.27■□□□□ 0.03
CNKSR3-204ENST00000479339 SMC1AQ14683 1233 aaKnown RBP15.27■□□□□ 0.03
CNKSR3-204ENST00000479339 TWISTNBQ3B726 338 aaPredicted RBP15.27■□□□□ 0.03
CNKSR3-204ENST00000479339 TPTE2Q6XPS3 522 aa15.27■□□□□ 0.03
CNKSR3-204ENST00000479339 IMPACTQ9P2X3 320 aa15.27■□□□□ 0.03
CNKSR3-204ENST00000479339 COL11A2P13942 1736 aaPredicted RBP15.26■□□□□ 0.03
CNKSR3-204ENST00000479339 KLRG2A4D1S0 409 aaPredicted RBP15.26■□□□□ 0.03
CNKSR3-204ENST00000479339 EFCAB8A8MWE9 144 aa15.26■□□□□ 0.03
CNKSR3-204ENST00000479339 NRDCO43847 1150 aa15.26■□□□□ 0.03
CNKSR3-204ENST00000479339 ZNF853P0CG23 659 aa15.26■□□□□ 0.03
CNKSR3-204ENST00000479339 SRGNP10124 158 aa15.26■□□□□ 0.03
CNKSR3-204ENST00000479339 CEP120Q8N960 986 aa15.26■□□□□ 0.03
CNKSR3-204ENST00000479339 ZNF526Q8TF50 670 aaPredicted RBP15.26■□□□□ 0.03
CNKSR3-204ENST00000479339 SALL3Q9BXA9 1300 aa15.26■□□□□ 0.03
CNKSR3-204ENST00000479339 EIF2S2P20042 333 aaKnown RBP15.26■□□□□ 0.03
CNKSR3-204ENST00000479339 CNKSR1Q969H4 720 aa15.26■□□□□ 0.03
CNKSR3-204ENST00000479339 ZSCAN31Q96LW9 406 aaPredicted RBP15.26■□□□□ 0.03
CNKSR3-204ENST00000479339 SCAND2PQ9GZW5 306 aaPredicted RBP15.26■□□□□ 0.03
CNKSR3-204ENST00000479339 AOX1Q06278 1338 aa15.26■□□□□ 0.03
CNKSR3-204ENST00000479339 CPP00450 1065 aa15.25■□□□□ 0.03
CNKSR3-204ENST00000479339 MYCNP04198 464 aaPredicted RBP15.25■□□□□ 0.03
CNKSR3-204ENST00000479339 TPRNQ4KMQ1 711 aa15.25■□□□□ 0.03
CNKSR3-204ENST00000479339 REXO1L1PQ8IX06 675 aa15.25■□□□□ 0.03
CNKSR3-204ENST00000479339 BANK1Q8NDB2 785 aa15.25■□□□□ 0.03
CNKSR3-204ENST00000479339 MASTLQ96GX5 879 aa15.25■□□□□ 0.03
CNKSR3-204ENST00000479339 SH2B1Q9NRF2 756 aaPredicted RBP15.25■□□□□ 0.03
CNKSR3-204ENST00000479339 DONSONQ9NYP3 566 aa15.25■□□□□ 0.03
CNKSR3-204ENST00000479339 RNF181Q9P0P0 153 aa15.25■□□□□ 0.03
CNKSR3-204ENST00000479339 EXOC6BQ9Y2D4 811 aa15.25■□□□□ 0.03
CNKSR3-204ENST00000479339 TBC1D8O95759 1140 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 HOXB7P09629 217 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 RASSF7Q02833 373 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 TSPYL6Q8N831 410 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 CCDC150Q8NCX0 1101 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 NYXQ9GZU5 481 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 OSBPL5Q9H0X9 879 aaPredicted RBP15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 MKRN1Q9UHC7 482 aaKnown RBP15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 TTC41PQ6P2S7 1318 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 GOLGA6L4A6NEF3 574 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 LIG1P18858 919 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 GSCP56915 257 aaPredicted RBP15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 PROSER3Q2NL68 480 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 GIGYF2Q6Y7W6 1299 aaKnown RBP15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 TTC6Q86TZ1 520 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 RPAINQ86UA6 219 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 ZNF34Q8IZ26 560 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 CEP89Q96ST8 783 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 ZBTB3Q9H5J0 574 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 TRMT1Q9NXH9 659 aaKnown RBP15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 DACT1Q9NYF0 836 aa15.24■□□□□ 0.03
CNKSR3-204ENST00000479339 KIF3CO14782 793 aa15.23■□□□□ 0.03
CNKSR3-204ENST00000479339 TADA3O75528 432 aa15.23■□□□□ 0.03
CNKSR3-204ENST00000479339 NPR1P16066 1061 aa15.23■□□□□ 0.03
CNKSR3-204ENST00000479339 GJB2P29033 226 aa15.23■□□□□ 0.03
CNKSR3-204ENST00000479339 CAMK4Q16566 473 aa15.23■□□□□ 0.03
CNKSR3-204ENST00000479339 KRT24Q2M2I5 525 aa15.23■□□□□ 0.03
CNKSR3-204ENST00000479339 JAKMIP3Q5VZ66 844 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms