RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 CELA3AP09093 270 aa7.92□□□□□ -1.14
RFC4-212ENST00000479307 DGKGP49619 791 aa7.92□□□□□ -1.14
RFC4-212ENST00000479307 ARL4DP49703 201 aa7.92□□□□□ -1.14
RFC4-212ENST00000479307 RPS26P62854 115 aaKnown RBP7.92□□□□□ -1.14
RFC4-212ENST00000479307 PIP4K2BP78356 416 aa7.92□□□□□ -1.14
RFC4-212ENST00000479307 ZNF423Q2M1K9 1284 aa7.92□□□□□ -1.14
RFC4-212ENST00000479307 MAP4K3Q8IVH8 894 aa7.92□□□□□ -1.14
RFC4-212ENST00000479307 DCAF11Q8TEB1 546 aa7.92□□□□□ -1.14
RFC4-212ENST00000479307 OSGEPQ9NPF4 335 aa7.92□□□□□ -1.14
RFC4-212ENST00000479307 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.92□□□□□ -1.14
RFC4-212ENST00000479307 SMARCA4P51532 1647 aa7.92□□□□□ -1.14
RFC4-212ENST00000479307 NID1P14543 1247 aa7.91□□□□□ -1.14
RFC4-212ENST00000479307 LIG3P49916 1009 aa7.91□□□□□ -1.14
RFC4-212ENST00000479307 ZNF394Q53GI3 561 aa7.91□□□□□ -1.14
RFC4-212ENST00000479307 ZNF385CQ66K41 422 aaPredicted RBP7.91□□□□□ -1.14
RFC4-212ENST00000479307 SVOPQ8N4V2 548 aa7.91□□□□□ -1.14
RFC4-212ENST00000479307 TMEM74Q96NL1 305 aa7.91□□□□□ -1.14
RFC4-212ENST00000479307 KBTBD4Q9NVX7 518 aa7.91□□□□□ -1.14
RFC4-212ENST00000479307 BAZ1BQ9UIG0 1483 aaKnown RBP7.91□□□□□ -1.14
RFC4-212ENST00000479307 SOX1O00570 391 aaPredicted RBP7.9□□□□□ -1.14
RFC4-212ENST00000479307 NME2P22392 152 aa7.9□□□□□ -1.14
RFC4-212ENST00000479307 RACK1P63244 317 aaKnown RBP7.9□□□□□ -1.14
RFC4-212ENST00000479307 AP3B2Q13367 1082 aa7.9□□□□□ -1.14
RFC4-212ENST00000479307 TTBK2Q6IQ55 1244 aa7.9□□□□□ -1.14
RFC4-212ENST00000479307 C8orf86Q6ZUL3 223 aa7.9□□□□□ -1.14
RFC4-212ENST00000479307 ILDR2Q71H61 639 aa7.9□□□□□ -1.14
RFC4-212ENST00000479307 DTWD1Q8N5C7 304 aa7.9□□□□□ -1.14
RFC4-212ENST00000479307 KLHL23Q8NBE8 558 aa7.9□□□□□ -1.14
RFC4-212ENST00000479307 NEDD1Q8NHV4 660 aa7.9□□□□□ -1.14
RFC4-212ENST00000479307 WHAMMQ8TF30 809 aa7.9□□□□□ -1.14
RFC4-212ENST00000479307 EMILIN2Q9BXX0 1053 aa7.9□□□□□ -1.14
RFC4-212ENST00000479307 PEG3Q9GZU2 1588 aa7.89□□□□□ -1.15
RFC4-212ENST00000479307 PIK3R2O00459 728 aa7.89□□□□□ -1.15
RFC4-212ENST00000479307 GBP2P32456 591 aaPredicted RBP7.89□□□□□ -1.15
RFC4-212ENST00000479307 C19orf57Q0VDD7 668 aa7.89□□□□□ -1.15
RFC4-212ENST00000479307 GNL2Q13823 731 aaKnown RBP7.89□□□□□ -1.15
RFC4-212ENST00000479307 COL9A3Q14050 684 aaPredicted RBP7.89□□□□□ -1.15
RFC4-212ENST00000479307 PCNX4Q63HM2 1172 aa7.89□□□□□ -1.15
RFC4-212ENST00000479307 SCARA3Q6AZY7 606 aa7.89□□□□□ -1.15
RFC4-212ENST00000479307 AGMOQ6ZNB7 445 aa7.89□□□□□ -1.15
RFC4-212ENST00000479307 PHC3Q8NDX5 983 aa7.89□□□□□ -1.15
RFC4-212ENST00000479307 TRIM56Q9BRZ2 755 aaKnown RBP7.89□□□□□ -1.15
RFC4-212ENST00000479307 COPRSQ9NQ92 184 aa7.89□□□□□ -1.15
RFC4-212ENST00000479307 CYP8B1Q9UNU6 501 aa7.89□□□□□ -1.15
RFC4-212ENST00000479307 PCDHGB7Q9Y5F8 929 aa7.89□□□□□ -1.15
RFC4-212ENST00000479307 LINC01387J3KSC0 135 aa7.88□□□□□ -1.15
RFC4-212ENST00000479307 FSCN2O14926 492 aa7.88□□□□□ -1.15
RFC4-212ENST00000479307 PAGE1O75459 146 aa7.88□□□□□ -1.15
RFC4-212ENST00000479307 CYP11A1P05108 521 aa7.88□□□□□ -1.15
RFC4-212ENST00000479307 HOXB4P17483 251 aaPredicted RBP7.88□□□□□ -1.15
RFC4-212ENST00000479307 ZNF157P51786 506 aaPredicted RBP7.88□□□□□ -1.15
RFC4-212ENST00000479307 LRRC14Q15048 493 aa7.88□□□□□ -1.15
RFC4-212ENST00000479307 SULF2Q8IWU5 870 aa7.88□□□□□ -1.15
RFC4-212ENST00000479307 SLC7A3Q8WY07 619 aa7.88□□□□□ -1.15
RFC4-212ENST00000479307 RHOVQ96L33 236 aa7.88□□□□□ -1.15
RFC4-212ENST00000479307 RRAGCQ9HB90 399 aa7.88□□□□□ -1.15
RFC4-212ENST00000479307 ARAP1Q96P48 1450 aa7.87□□□□□ -1.15
RFC4-212ENST00000479307 LMNB1P20700 586 aa7.87□□□□□ -1.15
RFC4-212ENST00000479307 ARNTP27540 789 aa7.87□□□□□ -1.15
RFC4-212ENST00000479307 LMNB2Q03252 620 aa7.87□□□□□ -1.15
RFC4-212ENST00000479307 MAP3K11Q16584 847 aa7.87□□□□□ -1.15
RFC4-212ENST00000479307 NAALADL2Q58DX5 795 aa7.87□□□□□ -1.15
RFC4-212ENST00000479307 ACBD3Q9H3P7 528 aa7.87□□□□□ -1.15
RFC4-212ENST00000479307 KCNQ5Q9NR82 932 aa7.87□□□□□ -1.15
RFC4-212ENST00000479307 SPDYE3A6NKU9 549 aa7.86□□□□□ -1.15
RFC4-212ENST00000479307 ARHGEF15O94989 841 aa7.86□□□□□ -1.15
RFC4-212ENST00000479307 BMP6P22004 513 aa7.86□□□□□ -1.15
RFC4-212ENST00000479307 CDC25BP30305 580 aa7.86□□□□□ -1.15
RFC4-212ENST00000479307 EIF4A3P38919 411 aaKnown RBP7.86□□□□□ -1.15
RFC4-212ENST00000479307 HNRNPUQ00839 825 aaKnown RBP eCLIP7.86□□□□□ -1.15
RFC4-212ENST00000479307 GSTM4Q03013 218 aa7.86□□□□□ -1.15
RFC4-212ENST00000479307 DIEXFQ68CQ4 756 aaKnown RBP7.86□□□□□ -1.15
RFC4-212ENST00000479307 TXNDC11Q6PKC3 985 aa7.86□□□□□ -1.15
RFC4-212ENST00000479307 CCDC84Q86UT8 332 aaPredicted RBP7.86□□□□□ -1.15
RFC4-212ENST00000479307 TRIM42Q8IWZ5 723 aa7.86□□□□□ -1.15
RFC4-212ENST00000479307 SLC43A3Q8NBI5 491 aa7.86□□□□□ -1.15
RFC4-212ENST00000479307 SPATA32Q96LK8 384 aa7.86□□□□□ -1.15
RFC4-212ENST00000479307 TINF2Q9BSI4 451 aa7.86□□□□□ -1.15
RFC4-212ENST00000479307 SPON2Q9BUD6 331 aa7.86□□□□□ -1.15
RFC4-212ENST00000479307 MINDY4BA8MYZ0 360 aa7.85□□□□□ -1.15
RFC4-212ENST00000479307 CAMK2GQ13555 558 aaPredicted RBP7.85□□□□□ -1.15
RFC4-212ENST00000479307 SETDB1Q15047 1291 aa7.85□□□□□ -1.15
RFC4-212ENST00000479307 HP1BP3Q5SSJ5 553 aaPredicted RBP7.85□□□□□ -1.15
RFC4-212ENST00000479307 TRAPPC3LQ5T215 181 aa7.85□□□□□ -1.15
RFC4-212ENST00000479307 LLGL2Q6P1M3 1020 aa7.85□□□□□ -1.15
RFC4-212ENST00000479307 KIAA0825Q8IV33 1275 aa7.85□□□□□ -1.15
RFC4-212ENST00000479307 DMRTC2Q8IXT2 367 aaPredicted RBP7.85□□□□□ -1.15
RFC4-212ENST00000479307 CAPN10Q9HC96 672 aa7.85□□□□□ -1.15
RFC4-212ENST00000479307 MKL2Q9ULH7 1088 aa7.85□□□□□ -1.15
RFC4-212ENST00000479307 INPP5FQ9Y2H2 1132 aa7.85□□□□□ -1.15
RFC4-212ENST00000479307 GNB5O14775 395 aa7.84□□□□□ -1.15
RFC4-212ENST00000479307 PF4P02776 101 aa7.84□□□□□ -1.15
RFC4-212ENST00000479307 GSTP1P09211 210 aaKnown RBP7.84□□□□□ -1.15
RFC4-212ENST00000479307 TFE3P19532 575 aaPredicted RBP7.84□□□□□ -1.15
RFC4-212ENST00000479307 GJA8P48165 433 aa7.84□□□□□ -1.15
RFC4-212ENST00000479307 RAC1P63000 192 aa7.84□□□□□ -1.15
RFC4-212ENST00000479307 ZNF252P-AS1Q0IIN9 211 aa7.84□□□□□ -1.15
RFC4-212ENST00000479307 SF3A1Q15459 793 aaKnown RBP7.84□□□□□ -1.15
RFC4-212ENST00000479307 PDZD3Q86UT5 571 aa7.84□□□□□ -1.15
RFC4-212ENST00000479307 CORO1BQ9BR76 489 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms