RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 FOXP2O15409 715 aa15.85■□□□□ 0.13
CHD3-210ENST00000479080 SGSM2O43147 1006 aa15.85■□□□□ 0.13
CHD3-210ENST00000479080 UBE3CQ15386 1083 aa15.85■□□□□ 0.13
CHD3-210ENST00000479080 DIXDC1Q155Q3 683 aa15.85■□□□□ 0.13
CHD3-210ENST00000479080 SLC9C2Q5TAH2 1124 aa15.85■□□□□ 0.13
CHD3-210ENST00000479080 DCAF8Q5TAQ9 597 aa15.85■□□□□ 0.13
CHD3-210ENST00000479080 CCDC129Q6ZRS4 1044 aa15.85■□□□□ 0.13
CHD3-210ENST00000479080 ERICH6Q7L0X2 663 aa15.85■□□□□ 0.13
CHD3-210ENST00000479080 PUS7LQ9H0K6 701 aaKnown RBP15.85■□□□□ 0.13
CHD3-210ENST00000479080 RAI14Q9P0K7 980 aa15.85■□□□□ 0.13
CHD3-210ENST00000479080 LRP2BPQ9P2M1 347 aa15.85■□□□□ 0.13
CHD3-210ENST00000479080 C9orf131Q5VYM1 1079 aa15.84■□□□□ 0.13
CHD3-210ENST00000479080 RSBN1LQ6PCB5 846 aaPredicted RBP15.84■□□□□ 0.13
CHD3-210ENST00000479080 CWC27Q6UX04 472 aaKnown RBP15.84■□□□□ 0.13
CHD3-210ENST00000479080 TBC1D22AQ8WUA7 517 aa15.84■□□□□ 0.13
CHD3-210ENST00000479080 APPBP2Q92624 585 aa15.84■□□□□ 0.13
CHD3-210ENST00000479080 ZBTB12Q9Y330 459 aaPredicted RBP15.84■□□□□ 0.13
CHD3-210ENST00000479080 PCDHAC2Q9Y5I4 1007 aa15.84■□□□□ 0.13
CHD3-210ENST00000479080 SHTN1A0MZ66 631 aa15.83■□□□□ 0.12
CHD3-210ENST00000479080 LDHBP07195 334 aaKnown RBP15.83■□□□□ 0.12
CHD3-210ENST00000479080 MAP3K12Q12852 859 aa15.83■□□□□ 0.12
CHD3-210ENST00000479080 CIAPIN1Q6FI81 312 aa15.83■□□□□ 0.12
CHD3-210ENST00000479080 TICAM2Q86XR7 235 aa15.83■□□□□ 0.12
CHD3-210ENST00000479080 JDP2Q8WYK2 163 aa15.83■□□□□ 0.12
CHD3-210ENST00000479080 RIOK1Q9BRS2 568 aaKnown RBP15.83■□□□□ 0.12
CHD3-210ENST00000479080 DIAPH3Q9NSV4 1193 aa15.83■□□□□ 0.12
CHD3-210ENST00000479080 RNF181Q9P0P0 153 aa15.83■□□□□ 0.12
CHD3-210ENST00000479080 GAKO14976 1311 aa15.83■□□□□ 0.12
CHD3-210ENST00000479080 F8W031 263 aaPredicted RBP15.82■□□□□ 0.12
CHD3-210ENST00000479080 ZFYP08048 801 aaPredicted RBP15.82■□□□□ 0.12
CHD3-210ENST00000479080 CYP7A1P22680 504 aa15.82■□□□□ 0.12
CHD3-210ENST00000479080 DYNLL1P63167 89 aaKnown RBP15.82■□□□□ 0.12
CHD3-210ENST00000479080 KIAA0825Q8IV33 1275 aa15.82■□□□□ 0.12
CHD3-210ENST00000479080 ZGPATQ8N5A5 531 aaKnown RBP15.82■□□□□ 0.12
CHD3-210ENST00000479080 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.82■□□□□ 0.12
CHD3-210ENST00000479080 SUGT1Q9Y2Z0 365 aa15.82■□□□□ 0.12
CHD3-210ENST00000479080 RAD50Q92878 1312 aa15.82■□□□□ 0.12
CHD3-210ENST00000479080 MROH7-TTC4A0A0A0MT08 1334 aa15.81■□□□□ 0.12
CHD3-210ENST00000479080 HIP1O00291 1037 aa15.81■□□□□ 0.12
CHD3-210ENST00000479080 GRIN3BO60391 1043 aa15.81■□□□□ 0.12
CHD3-210ENST00000479080 SCNN1DP51172 638 aa15.81■□□□□ 0.12
CHD3-210ENST00000479080 VPS53Q5VIR6 699 aa15.81■□□□□ 0.12
CHD3-210ENST00000479080 SPTY2D1Q68D10 685 aaPredicted RBP15.81■□□□□ 0.12
CHD3-210ENST00000479080 NAA16Q6N069 864 aaPredicted RBP15.81■□□□□ 0.12
CHD3-210ENST00000479080 LCORLQ8N3X6 602 aa15.81■□□□□ 0.12
CHD3-210ENST00000479080 MIGA1Q8NAN2 632 aa15.81■□□□□ 0.12
CHD3-210ENST00000479080 LSG1Q9H089 658 aaKnown RBP15.81■□□□□ 0.12
CHD3-210ENST00000479080 HELLSQ9NRZ9 838 aa15.81■□□□□ 0.12
CHD3-210ENST00000479080 TTF2Q9UNY4 1162 aaKnown RBP15.81■□□□□ 0.12
CHD3-210ENST00000479080 DAGLAQ9Y4D2 1042 aa15.81■□□□□ 0.12
CHD3-210ENST00000479080 PTH1RQ03431 593 aa15.8■□□□□ 0.12
CHD3-210ENST00000479080 ZSCAN25Q6NSZ9 544 aa15.8■□□□□ 0.12
CHD3-210ENST00000479080 DZIP1Q86YF9 867 aaKnown RBP15.8■□□□□ 0.12
CHD3-210ENST00000479080 FAM163AQ96GL9 167 aaPredicted RBP15.8■□□□□ 0.12
CHD3-210ENST00000479080 CCDC171Q6TFL3 1326 aa15.79■□□□□ 0.12
CHD3-210ENST00000479080 GPAA1O43292 621 aa15.79■□□□□ 0.12
CHD3-210ENST00000479080 IGSF3O75054 1194 aa15.79■□□□□ 0.12
CHD3-210ENST00000479080 MBD4O95243 580 aa15.79■□□□□ 0.12
CHD3-210ENST00000479080 GMPSP49915 693 aaPredicted RBP15.79■□□□□ 0.12
CHD3-210ENST00000479080 RHBDL3P58872 404 aa15.79■□□□□ 0.12
CHD3-210ENST00000479080 MCMDC2Q4G0Z9 681 aa15.79■□□□□ 0.12
CHD3-210ENST00000479080 ARMT1Q9H993 441 aa15.79■□□□□ 0.12
CHD3-210ENST00000479080 MYO3BQ8WXR4 1341 aa15.78■□□□□ 0.12
CHD3-210ENST00000479080 PRKAB2O43741 272 aa15.78■□□□□ 0.12
CHD3-210ENST00000479080 EGFRP00533 1210 aa15.78■□□□□ 0.12
CHD3-210ENST00000479080 CRKP46108 304 aa15.78■□□□□ 0.12
CHD3-210ENST00000479080 MFAP1P55081 439 aaKnown RBP15.78■□□□□ 0.12
CHD3-210ENST00000479080 EIF6P56537 245 aaKnown RBP15.78■□□□□ 0.12
CHD3-210ENST00000479080 AGBL3Q8NEM8 1001 aa15.78■□□□□ 0.12
CHD3-210ENST00000479080 ZBED3Q96IU2 234 aaPredicted RBP15.78■□□□□ 0.12
CHD3-210ENST00000479080 STRBPQ96SI9 672 aaKnown RBP15.78■□□□□ 0.12
CHD3-210ENST00000479080 EPB41L4AQ9HCS5 686 aaPredicted RBP15.78■□□□□ 0.12
CHD3-210ENST00000479080 MYH2Q9UKX2 1941 aa15.77■□□□□ 0.12
CHD3-210ENST00000479080 GPR75-ASB3A0A0A6YYF3 556 aa15.77■□□□□ 0.12
CHD3-210ENST00000479080 BTDP43251 543 aa15.77■□□□□ 0.12
CHD3-210ENST00000479080 PPP4CP60510 307 aa15.77■□□□□ 0.12
CHD3-210ENST00000479080 TNIP1Q15025 636 aa15.77■□□□□ 0.12
CHD3-210ENST00000479080 APOBEC3HQ6NTF7 200 aaKnown RBP15.77■□□□□ 0.12
CHD3-210ENST00000479080 HHIPL2Q6UWX4 724 aa15.77■□□□□ 0.12
CHD3-210ENST00000479080 AATFQ9NY61 560 aaKnown RBP eCLIP15.77■□□□□ 0.12
CHD3-210ENST00000479080 GJA3Q9Y6H8 435 aa15.77■□□□□ 0.12
CHD3-210ENST00000479080 MAGEB6P1A0A0J9YX57 407 aa15.76■□□□□ 0.11
CHD3-210ENST00000479080 DDNO94850 711 aaPredicted RBP15.76■□□□□ 0.11
CHD3-210ENST00000479080 ZNF280AP59817 542 aaPredicted RBP15.76■□□□□ 0.11
CHD3-210ENST00000479080 HDLBPQ00341 1268 aaKnown RBP15.76■□□□□ 0.11
CHD3-210ENST00000479080 LRRFIP1Q32MZ4 808 aaKnown RBP15.76■□□□□ 0.11
CHD3-210ENST00000479080 TMED8Q6PL24 325 aaPredicted RBP15.76■□□□□ 0.11
CHD3-210ENST00000479080 SH3RF3Q8TEJ3 882 aaPredicted RBP15.76■□□□□ 0.11
CHD3-210ENST00000479080 RUFY2Q8WXA3 655 aa15.76■□□□□ 0.11
CHD3-210ENST00000479080 MRIQ9BWK5 157 aa15.76■□□□□ 0.11
CHD3-210ENST00000479080 DDX60LQ5H9U9 1706 aaKnown RBP15.76■□□□□ 0.11
CHD3-210ENST00000479080 RPS12P25398 132 aaKnown RBP15.75■□□□□ 0.11
CHD3-210ENST00000479080 GSTO1P78417 241 aa15.75■□□□□ 0.11
CHD3-210ENST00000479080 CFAP100Q494V2 611 aa15.75■□□□□ 0.11
CHD3-210ENST00000479080 CASC1Q6TDU7 716 aa15.75■□□□□ 0.11
CHD3-210ENST00000479080 GPC2Q8N158 579 aa15.75■□□□□ 0.11
CHD3-210ENST00000479080 DPF2Q92785 391 aa15.75■□□□□ 0.11
CHD3-210ENST00000479080 ZDHHC15Q96MV8 337 aa15.75■□□□□ 0.11
CHD3-210ENST00000479080 USP26Q9BXU7 913 aa15.75■□□□□ 0.11
CHD3-210ENST00000479080 ANO2Q9NQ90 1003 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms