RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 TTC5Q8N0Z6 440 aa12.76□□□□□ -0.37
LRRFIP1-211ENST00000478958 ANKRD20A12PQ8NF67 263 aa12.76□□□□□ -0.37
LRRFIP1-211ENST00000478958 GOLGA5Q8TBA6 731 aa12.76□□□□□ -0.37
LRRFIP1-211ENST00000478958 MRPS27Q92552 414 aaKnown RBP12.76□□□□□ -0.37
LRRFIP1-211ENST00000478958 CCDC85AQ96PX6 553 aaPredicted RBP12.76□□□□□ -0.37
LRRFIP1-211ENST00000478958 XPO4Q9C0E2 1151 aaKnown RBP12.76□□□□□ -0.37
LRRFIP1-211ENST00000478958 PNMA6AP0CW24 399 aaPredicted RBP12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 HSPD1P10809 573 aaKnown RBP12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 LMOD1P29536 600 aaPredicted RBP12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 NYAP1Q6ZVC0 841 aa12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 CCDC189A1A4V9 331 aa12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 ERCC6LQ2NKX8 1250 aa12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 MCTP2Q6DN12 878 aa12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 LRRN4CLQ8ND94 238 aa12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 LLPHQ9BRT6 129 aaKnown RBP12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 NAT10Q9H0A0 1025 aaKnown RBP12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 ADGRL3Q9HAR2 1447 aa12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 NEMFO60524 1076 aa12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 MARCKSP29966 332 aaPredicted RBP12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 WASHC4Q2M389 1173 aa12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 NBPF11Q86T75 865 aa12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 HOMER1Q86YM7 354 aa12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 ANKARQ7Z5J8 1434 aa12.75□□□□□ -0.37
LRRFIP1-211ENST00000478958 HEG1Q9ULI3 1381 aa12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 HMGB1P09429 215 aaKnown RBP12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 FDPSP14324 419 aaKnown RBP12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 HSP90AA4PQ58FG1 418 aa12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 SWT1Q5T5J6 900 aaKnown RBP12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 SLC52A2Q9HAB3 445 aa12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 RBM28Q9NW13 759 aaKnown RBP12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 JCADQ9P266 1359 aa12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 N4BP2Q86UW6 1770 aaPredicted RBP12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 CSB-PGBD3P0DP91 1061 aa12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 GOLGA8FQ08AF8 430 aa12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 GOLGA8DPQ0D2H9 430 aa12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 LRRC24Q50LG9 513 aa12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 FMR1NBQ8N0W7 255 aaPredicted RBP12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 FAM177A1Q8N128 213 aaPredicted RBP12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 AK7Q96M32 723 aa12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 ZNF330Q9Y3S2 320 aaPredicted RBP12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 CARMIL3Q8ND23 1372 aa12.74□□□□□ -0.37
LRRFIP1-211ENST00000478958 MED1Q15648 1581 aaPredicted RBP12.73□□□□□ -0.37
LRRFIP1-211ENST00000478958 SLU7O95391 586 aaKnown RBP12.73□□□□□ -0.37
LRRFIP1-211ENST00000478958 IFIT1P09914 478 aaKnown RBP12.73□□□□□ -0.37
LRRFIP1-211ENST00000478958 SFPQP23246 707 aaKnown RBP eCLIP12.73□□□□□ -0.37
LRRFIP1-211ENST00000478958 E4F1Q66K89 784 aaPredicted RBP12.73□□□□□ -0.37
LRRFIP1-211ENST00000478958 SUGP1Q8IWZ8 645 aaKnown RBP12.73□□□□□ -0.37
LRRFIP1-211ENST00000478958 C8orf76Q96K31 380 aa12.73□□□□□ -0.37
LRRFIP1-211ENST00000478958 KIAA1468Q9P260 1216 aa12.73□□□□□ -0.37
LRRFIP1-211ENST00000478958 ATP1A3P13637 1013 aa12.73□□□□□ -0.37
LRRFIP1-211ENST00000478958 CALRP27797 417 aaKnown RBP12.73□□□□□ -0.37
LRRFIP1-211ENST00000478958 EXOSC10Q01780 885 aaKnown RBP12.73□□□□□ -0.37
LRRFIP1-211ENST00000478958 PPP2R5AQ15172 486 aa12.73□□□□□ -0.37
LRRFIP1-211ENST00000478958 ARMCX5Q6P1M9 558 aa12.73□□□□□ -0.37
LRRFIP1-211ENST00000478958 RPAINQ86UA6 219 aa12.73□□□□□ -0.37
LRRFIP1-211ENST00000478958 MAST3O60307 1309 aa12.73□□□□□ -0.37
LRRFIP1-211ENST00000478958 CPLX1O14810 134 aa12.72□□□□□ -0.37
LRRFIP1-211ENST00000478958 PPP1R12AO14974 1030 aaPredicted RBP12.72□□□□□ -0.37
LRRFIP1-211ENST00000478958 SLC3A2P08195 630 aaKnown RBP12.72□□□□□ -0.37
LRRFIP1-211ENST00000478958 RXRAP19793 462 aa12.72□□□□□ -0.37
LRRFIP1-211ENST00000478958 PPM1EQ8WY54 764 aa12.72□□□□□ -0.37
LRRFIP1-211ENST00000478958 RGPD2P0DJD1 1756 aa12.72□□□□□ -0.37
LRRFIP1-211ENST00000478958 KLF18A0A0U1RQI7 1052 aa12.72□□□□□ -0.37
LRRFIP1-211ENST00000478958 GOLGA8BA8MQT2 603 aa12.72□□□□□ -0.37
LRRFIP1-211ENST00000478958 M0R2C6 588 aa12.72□□□□□ -0.37
LRRFIP1-211ENST00000478958 H2AFXP16104 143 aaPredicted RBP12.72□□□□□ -0.37
LRRFIP1-211ENST00000478958 CLCN6P51797 869 aa12.72□□□□□ -0.37
LRRFIP1-211ENST00000478958 ADALQ6DHV7 355 aa12.72□□□□□ -0.37
LRRFIP1-211ENST00000478958 SYNE3Q6ZMZ3 975 aa12.72□□□□□ -0.37
LRRFIP1-211ENST00000478958 LINC00301Q8NCQ3 95 aa12.72□□□□□ -0.37
LRRFIP1-211ENST00000478958 ORC3Q9UBD5 711 aaPredicted RBP12.72□□□□□ -0.37
LRRFIP1-211ENST00000478958 SPTLC2O15270 562 aa12.71□□□□□ -0.37
LRRFIP1-211ENST00000478958 SNRPA1P09661 255 aaKnown RBP12.71□□□□□ -0.37
LRRFIP1-211ENST00000478958 STK11IPQ8N1F8 1099 aa12.71□□□□□ -0.37
LRRFIP1-211ENST00000478958 OSBP2Q969R2 916 aa12.71□□□□□ -0.37
LRRFIP1-211ENST00000478958 PPP1R13BQ96KQ4 1090 aa12.71□□□□□ -0.37
LRRFIP1-211ENST00000478958 AIFM3Q96NN9 605 aa12.71□□□□□ -0.37
LRRFIP1-211ENST00000478958 PUS3Q9BZE2 481 aaKnown RBP12.71□□□□□ -0.37
LRRFIP1-211ENST00000478958 ZBTB3Q9H5J0 574 aa12.71□□□□□ -0.37
LRRFIP1-211ENST00000478958 LTN1O94822 1766 aa12.71□□□□□ -0.37
LRRFIP1-211ENST00000478958 KDM3BQ7LBC6 1761 aa12.71□□□□□ -0.37
LRRFIP1-211ENST00000478958 ZNF202O95125 648 aa12.71□□□□□ -0.37
LRRFIP1-211ENST00000478958 GSDMDP57764 484 aa12.71□□□□□ -0.37
LRRFIP1-211ENST00000478958 BIRC2Q13490 618 aa12.71□□□□□ -0.38
LRRFIP1-211ENST00000478958 ZMYM1Q5SVZ6 1142 aa12.71□□□□□ -0.38
LRRFIP1-211ENST00000478958 DNAI1Q9UI46 699 aa12.71□□□□□ -0.38
LRRFIP1-211ENST00000478958 SH3TC1Q8TE82 1336 aa12.7□□□□□ -0.38
LRRFIP1-211ENST00000478958 CCDC196A0A1B0GTZ2 297 aa12.7□□□□□ -0.38
LRRFIP1-211ENST00000478958 LMAN1P49257 510 aa12.7□□□□□ -0.38
LRRFIP1-211ENST00000478958 RABL6Q3YEC7 729 aaPredicted RBP12.7□□□□□ -0.38
LRRFIP1-211ENST00000478958 TMCO3Q6UWJ1 677 aa12.7□□□□□ -0.38
LRRFIP1-211ENST00000478958 ATG9AQ7Z3C6 839 aa12.7□□□□□ -0.38
LRRFIP1-211ENST00000478958 DDX17Q92841 729 aaKnown RBP12.7□□□□□ -0.38
LRRFIP1-211ENST00000478958 CEP89Q96ST8 783 aa12.7□□□□□ -0.38
LRRFIP1-211ENST00000478958 DSCC1Q9BVC3 393 aa12.7□□□□□ -0.38
LRRFIP1-211ENST00000478958 KIF28PB7ZC32 967 aa12.7□□□□□ -0.38
LRRFIP1-211ENST00000478958 PI16Q6UXB8 463 aa12.7□□□□□ -0.38
LRRFIP1-211ENST00000478958 MMS22LQ6ZRQ5 1243 aa12.7□□□□□ -0.38
LRRFIP1-211ENST00000478958 TTLL7Q6ZT98 887 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms