RNA–Protein interactions for RNA: ENST00000478768.2

SNAP47-208, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 3

Gene SNAP47, Length 870 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-208ENST00000478768 TMEM39BQ9GZU3 492 aa12.81□□□□□ -0.36
SNAP47-208ENST00000478768 RBM27Q9P2N5 1060 aaKnown RBP12.81□□□□□ -0.36
SNAP47-208ENST00000478768 SERPINA10Q9UK55 444 aa12.81□□□□□ -0.36
SNAP47-208ENST00000478768 TTF2Q9UNY4 1162 aaKnown RBP12.81□□□□□ -0.36
SNAP47-208ENST00000478768 CACNA1FO60840 1977 aa12.81□□□□□ -0.36
SNAP47-208ENST00000478768 RANBP2P49792 3224 aaKnown RBP12.8□□□□□ -0.36
SNAP47-208ENST00000478768 WDHD1O75717 1129 aaPredicted RBP12.8□□□□□ -0.36
SNAP47-208ENST00000478768 DZIP1LQ8IYY4 767 aaKnown RBP12.8□□□□□ -0.36
SNAP47-208ENST00000478768 LINS1Q8NG48 757 aa12.8□□□□□ -0.36
SNAP47-208ENST00000478768 DNAAF4Q8WXU2 420 aa12.8□□□□□ -0.36
SNAP47-208ENST00000478768 DPF3Q92784 378 aa12.8□□□□□ -0.36
SNAP47-208ENST00000478768 SHISA4Q96DD7 197 aa12.8□□□□□ -0.36
SNAP47-208ENST00000478768 CHMP3Q9Y3E7 222 aa12.8□□□□□ -0.36
SNAP47-208ENST00000478768 FAM205AQ6ZU69 1335 aa12.8□□□□□ -0.36
SNAP47-208ENST00000478768 SPDYE5A6NIY4 337 aa12.79□□□□□ -0.36
SNAP47-208ENST00000478768 PLIN1O60240 522 aa12.79□□□□□ -0.36
SNAP47-208ENST00000478768 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
SNAP47-208ENST00000478768 GNRH1P01148 92 aa12.79□□□□□ -0.36
SNAP47-208ENST00000478768 CETPP11597 493 aa12.79□□□□□ -0.36
SNAP47-208ENST00000478768 TNNI2P48788 182 aa12.79□□□□□ -0.36
SNAP47-208ENST00000478768 FOXO4P98177 505 aa12.79□□□□□ -0.36
SNAP47-208ENST00000478768 FLIIQ13045 1269 aa12.79□□□□□ -0.36
SNAP47-208ENST00000478768 DDX10Q13206 875 aaKnown RBP12.79□□□□□ -0.36
SNAP47-208ENST00000478768 FKBP5Q13451 457 aaPredicted RBP12.79□□□□□ -0.36
SNAP47-208ENST00000478768 MTFR1Q15390 333 aa12.79□□□□□ -0.36
SNAP47-208ENST00000478768 TWISTNBQ3B726 338 aaPredicted RBP12.79□□□□□ -0.36
SNAP47-208ENST00000478768 ZCCHC17Q9NP64 241 aaKnown RBP12.79□□□□□ -0.36
SNAP47-208ENST00000478768 BTBD19C9JJ37 291 aa12.78□□□□□ -0.36
SNAP47-208ENST00000478768 CRKP46108 304 aa12.78□□□□□ -0.36
SNAP47-208ENST00000478768 PRMT2P55345 433 aa12.78□□□□□ -0.36
SNAP47-208ENST00000478768 ERO1BQ86YB8 467 aa12.78□□□□□ -0.36
SNAP47-208ENST00000478768 TDRD7Q8NHU6 1098 aaKnown RBP12.78□□□□□ -0.36
SNAP47-208ENST00000478768 ZNF594Q96JF6 807 aaPredicted RBP12.78□□□□□ -0.36
SNAP47-208ENST00000478768 SNCAIPQ9Y6H5 919 aa12.78□□□□□ -0.36
SNAP47-208ENST00000478768 DLL1O00548 723 aa12.77□□□□□ -0.37
SNAP47-208ENST00000478768 IRF6O14896 467 aa12.77□□□□□ -0.37
SNAP47-208ENST00000478768 SNAPC2Q13487 334 aa12.77□□□□□ -0.37
SNAP47-208ENST00000478768 LDHAL6AQ6ZMR3 332 aa12.77□□□□□ -0.37
SNAP47-208ENST00000478768 WRNIP1Q96S55 665 aa12.77□□□□□ -0.37
SNAP47-208ENST00000478768 CNNM1Q9NRU3 951 aa12.77□□□□□ -0.37
SNAP47-208ENST00000478768 CTGFP29279 349 aa12.76□□□□□ -0.37
SNAP47-208ENST00000478768 HIBADHP31937 336 aaKnown RBP12.76□□□□□ -0.37
SNAP47-208ENST00000478768 GYG1P46976 350 aa12.76□□□□□ -0.37
SNAP47-208ENST00000478768 CACNB3P54284 484 aa12.76□□□□□ -0.37
SNAP47-208ENST00000478768 CCDC57Q2TAC2 916 aa12.76□□□□□ -0.37
SNAP47-208ENST00000478768 TAF7LQ5H9L4 462 aa12.76□□□□□ -0.37
SNAP47-208ENST00000478768 LMBR1LQ6UX01 489 aa12.76□□□□□ -0.37
SNAP47-208ENST00000478768 NKX2-3Q8TAU0 364 aa12.76□□□□□ -0.37
SNAP47-208ENST00000478768 ZKSCAN4Q969J2 545 aaPredicted RBP12.76□□□□□ -0.37
SNAP47-208ENST00000478768 PRO3102Q9H379 93 aa12.76□□□□□ -0.37
SNAP47-208ENST00000478768 SRRDQ9UH36 339 aa12.76□□□□□ -0.37
SNAP47-208ENST00000478768 MGAMO43451 1857 aa12.76□□□□□ -0.37
SNAP47-208ENST00000478768 GRK4P32298 578 aa12.75□□□□□ -0.37
SNAP47-208ENST00000478768 PSMC4P43686 418 aa12.75□□□□□ -0.37
SNAP47-208ENST00000478768 GJA8P48165 433 aa12.75□□□□□ -0.37
SNAP47-208ENST00000478768 PPIL2Q13356 520 aa12.75□□□□□ -0.37
SNAP47-208ENST00000478768 UBE4AQ14139 1066 aa12.75□□□□□ -0.37
SNAP47-208ENST00000478768 GRIK5Q16478 980 aa12.75□□□□□ -0.37
SNAP47-208ENST00000478768 EPHA10Q5JZY3 1008 aa12.75□□□□□ -0.37
SNAP47-208ENST00000478768 C17orf99Q6UX52 265 aa12.75□□□□□ -0.37
SNAP47-208ENST00000478768 UBE2Q1Q7Z7E8 422 aa12.75□□□□□ -0.37
SNAP47-208ENST00000478768 SLC17A8Q8NDX2 589 aa12.75□□□□□ -0.37
SNAP47-208ENST00000478768 FAM84BQ96KN1 310 aaPredicted RBP12.75□□□□□ -0.37
SNAP47-208ENST00000478768 TRIM47Q96LD4 638 aa12.75□□□□□ -0.37
SNAP47-208ENST00000478768 HTATIP2Q9BUP3 242 aa12.75□□□□□ -0.37
SNAP47-208ENST00000478768 CPA4Q9UI42 421 aa12.75□□□□□ -0.37
SNAP47-208ENST00000478768 RIPOR2Q9Y4F9 1068 aa12.75□□□□□ -0.37
SNAP47-208ENST00000478768 COL6A3P12111 3177 aa12.75□□□□□ -0.37
SNAP47-208ENST00000478768 GJB1P08034 283 aa12.74□□□□□ -0.37
SNAP47-208ENST00000478768 CCL5P13501 91 aa12.74□□□□□ -0.37
SNAP47-208ENST00000478768 OSBPP22059 807 aa12.74□□□□□ -0.37
SNAP47-208ENST00000478768 RAET1EQ8TD07 263 aa12.74□□□□□ -0.37
SNAP47-208ENST00000478768 MYPNQ86TC9 1320 aa12.73□□□□□ -0.37
SNAP47-208ENST00000478768 ADGRA2Q96PE1 1338 aa12.73□□□□□ -0.37
SNAP47-208ENST00000478768 F6X3S4 739 aa12.73□□□□□ -0.37
SNAP47-208ENST00000478768 FMNL1O95466 1100 aaPredicted RBP12.73□□□□□ -0.37
SNAP47-208ENST00000478768 HOXD10P28358 340 aa12.73□□□□□ -0.37
SNAP47-208ENST00000478768 HDLBPQ00341 1268 aaKnown RBP12.73□□□□□ -0.37
SNAP47-208ENST00000478768 BEND3Q5T5X7 828 aa12.73□□□□□ -0.37
SNAP47-208ENST00000478768 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.73□□□□□ -0.37
SNAP47-208ENST00000478768 TEKT1Q969V4 418 aa12.73□□□□□ -0.37
SNAP47-208ENST00000478768 HOOK2Q96ED9 719 aa12.73□□□□□ -0.37
SNAP47-208ENST00000478768 RNF208Q9H0X6 261 aa12.73□□□□□ -0.37
SNAP47-208ENST00000478768 PRKRIP1Q9H875 184 aaPredicted RBP12.73□□□□□ -0.37
SNAP47-208ENST00000478768 TMOD2Q9NZR1 351 aa12.73□□□□□ -0.37
SNAP47-208ENST00000478768 IQSEC3Q9UPP2 1182 aaPredicted RBP12.73□□□□□ -0.37
SNAP47-208ENST00000478768 NR2E3Q9Y5X4 410 aa12.73□□□□□ -0.37
SNAP47-208ENST00000478768 AK9Q5TCS8 1911 aa12.72□□□□□ -0.37
SNAP47-208ENST00000478768 PDHXO00330 501 aa12.72□□□□□ -0.37
SNAP47-208ENST00000478768 PPATQ06203 517 aa12.72□□□□□ -0.37
SNAP47-208ENST00000478768 CHAF1AQ13111 956 aaPredicted RBP12.72□□□□□ -0.37
SNAP47-208ENST00000478768 ANKRD23Q86SG2 305 aa12.72□□□□□ -0.37
SNAP47-208ENST00000478768 FAM83AQ86UY5 434 aa12.72□□□□□ -0.37
SNAP47-208ENST00000478768 WWC1Q8IX03 1113 aa12.72□□□□□ -0.37
SNAP47-208ENST00000478768 PUS3Q9BZE2 481 aaKnown RBP12.72□□□□□ -0.37
SNAP47-208ENST00000478768 BIN2Q9UBW5 565 aaPredicted RBP12.72□□□□□ -0.37
SNAP47-208ENST00000478768 RPAP1Q9BWH6 1393 aaPredicted RBP12.71□□□□□ -0.37
SNAP47-208ENST00000478768 LAMA3Q16787 3333 aa12.71□□□□□ -0.37
SNAP47-208ENST00000478768 MYH13Q9UKX3 1938 aa12.71□□□□□ -0.37
SNAP47-208ENST00000478768 GRM8O00222 908 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms