RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 DTWD1Q8N5C7 304 aa3.21□□□□□ -1.9
PDE1C-208ENST00000478736 C3orf58Q8NDZ4 430 aa3.21□□□□□ -1.9
PDE1C-208ENST00000478736 GRIN3AQ8TCU5 1115 aa3.21□□□□□ -1.9
PDE1C-208ENST00000478736 TP53INP1Q96A56 240 aa3.21□□□□□ -1.9
PDE1C-208ENST00000478736 DUSP9Q99956 384 aaKnown RBP3.21□□□□□ -1.9
PDE1C-208ENST00000478736 CLEC4MQ9H2X3 399 aaPredicted RBP3.21□□□□□ -1.9
PDE1C-208ENST00000478736 SEMA6BQ9H3T3 888 aa3.21□□□□□ -1.9
PDE1C-208ENST00000478736 AKTIPQ9H8T0 292 aa3.21□□□□□ -1.9
PDE1C-208ENST00000478736 AKAP2Q9Y2D5 859 aa3.21□□□□□ -1.9
PDE1C-208ENST00000478736 F6X3S4 739 aa3.2□□□□□ -1.9
PDE1C-208ENST00000478736 PIK3R2O00459 728 aa3.2□□□□□ -1.9
PDE1C-208ENST00000478736 LDHBP07195 334 aaKnown RBP3.2□□□□□ -1.9
PDE1C-208ENST00000478736 GLB1P16278 677 aa3.2□□□□□ -1.9
PDE1C-208ENST00000478736 ERCC3P19447 782 aa3.2□□□□□ -1.9
PDE1C-208ENST00000478736 MAOBP27338 520 aa3.2□□□□□ -1.9
PDE1C-208ENST00000478736 PIP4K2BP78356 416 aa3.2□□□□□ -1.9
PDE1C-208ENST00000478736 ZSCAN29Q8IWY8 852 aaPredicted RBP3.2□□□□□ -1.9
PDE1C-208ENST00000478736 DZIP1LQ8IYY4 767 aaKnown RBP3.2□□□□□ -1.9
PDE1C-208ENST00000478736 TMEM130Q8N3G9 435 aa3.2□□□□□ -1.9
PDE1C-208ENST00000478736 KLHL23Q8NBE8 558 aa3.2□□□□□ -1.9
PDE1C-208ENST00000478736 USP26Q9BXU7 913 aa3.2□□□□□ -1.9
PDE1C-208ENST00000478736 MRPL18Q9H0U6 180 aaKnown RBP3.2□□□□□ -1.9
PDE1C-208ENST00000478736 NLRP2Q9NX02 1062 aa3.2□□□□□ -1.9
PDE1C-208ENST00000478736 ZNF862O60290 1169 aa3.19□□□□□ -1.9
PDE1C-208ENST00000478736 B3GALT4O96024 378 aa3.19□□□□□ -1.9
PDE1C-208ENST00000478736 CTSHP09668 335 aa3.19□□□□□ -1.9
PDE1C-208ENST00000478736 LIG1P18858 919 aa3.19□□□□□ -1.9
PDE1C-208ENST00000478736 PREPP48147 710 aa3.19□□□□□ -1.9
PDE1C-208ENST00000478736 CABP4P57796 275 aa3.19□□□□□ -1.9
PDE1C-208ENST00000478736 PTPN11Q06124 597 aaPredicted RBP3.19□□□□□ -1.9
PDE1C-208ENST00000478736 COL19A1Q14993 1142 aa3.19□□□□□ -1.9
PDE1C-208ENST00000478736 MEI1Q5TIA1 1274 aa3.19□□□□□ -1.9
PDE1C-208ENST00000478736 PRPF40BQ6NWY9 871 aaKnown RBP3.19□□□□□ -1.9
PDE1C-208ENST00000478736 TPTE2Q6XPS3 522 aa3.19□□□□□ -1.9
PDE1C-208ENST00000478736 DTHD1Q6ZMT9 781 aa3.19□□□□□ -1.9
PDE1C-208ENST00000478736 ALYREFQ86V81 257 aaKnown RBP3.19□□□□□ -1.9
PDE1C-208ENST00000478736 OSGEPQ9NPF4 335 aa3.19□□□□□ -1.9
PDE1C-208ENST00000478736 PARP2Q9UGN5 583 aa3.19□□□□□ -1.9
PDE1C-208ENST00000478736 PPP1R9AQ9ULJ8 1098 aa3.19□□□□□ -1.9
PDE1C-208ENST00000478736 HMX2A2RU54 273 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 ENC1O14682 589 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 DYRK3O43781 588 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 NEFLP07196 543 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 CELA3AP09093 270 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 USP17L7P0C7H9 530 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 BMP6P22004 513 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 CDK8P49336 464 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 EAPPQ56P03 285 aaPredicted RBP3.18□□□□□ -1.9
PDE1C-208ENST00000478736 CDPF1Q6NVV7 123 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 FAM117BQ6P1L5 589 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 Q6ZS46 218 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 PDZD3Q86UT5 571 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 CACTIN-AS1Q8N1I8 211 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 FAM46AQ96IP4 442 aaKnown RBP3.18□□□□□ -1.9
PDE1C-208ENST00000478736 NACC1Q96RE7 527 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 RUSC1Q9BVN2 902 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 TMPRSS13Q9BYE2 586 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 CCDC86Q9H6F5 360 aaKnown RBP3.18□□□□□ -1.9
PDE1C-208ENST00000478736 LGR6Q9HBX8 967 aa3.18□□□□□ -1.9
PDE1C-208ENST00000478736 DYNC1LI2O43237 492 aaPredicted RBP3.17□□□□□ -1.9
PDE1C-208ENST00000478736 POU4F3Q15319 338 aa3.17□□□□□ -1.9
PDE1C-208ENST00000478736 SGO2Q562F6 1265 aa3.17□□□□□ -1.9
PDE1C-208ENST00000478736 PRSS36Q5K4E3 855 aa3.17□□□□□ -1.9
PDE1C-208ENST00000478736 LDLRAD1Q5T700 205 aa3.17□□□□□ -1.9
PDE1C-208ENST00000478736 ALG1LQ6GMV1 187 aa3.17□□□□□ -1.9
PDE1C-208ENST00000478736 MAP4K3Q8IVH8 894 aa3.17□□□□□ -1.9
PDE1C-208ENST00000478736 TRIM42Q8IWZ5 723 aa3.17□□□□□ -1.9
PDE1C-208ENST00000478736 C12orf50Q8NA57 414 aaPredicted RBP3.17□□□□□ -1.9
PDE1C-208ENST00000478736 WNT8BQ93098 351 aa3.17□□□□□ -1.9
PDE1C-208ENST00000478736 NECAB3Q96P71 396 aaPredicted RBP3.17□□□□□ -1.9
PDE1C-208ENST00000478736 KRTAP9-8Q9BYQ0 159 aa3.17□□□□□ -1.9
PDE1C-208ENST00000478736 C12orf49Q9H741 205 aa3.17□□□□□ -1.9
PDE1C-208ENST00000478736 GPN3Q9UHW5 284 aaPredicted RBP3.17□□□□□ -1.9
PDE1C-208ENST00000478736 CSADQ9Y600 493 aa3.17□□□□□ -1.9
PDE1C-208ENST00000478736 RBM47A0AV96 593 aaKnown RBP3.16□□□□□ -1.9
PDE1C-208ENST00000478736 MEGF11A6BM72 1044 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 MED26O95402 600 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 TIAF1O95411 115 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 BMP3P12645 472 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 GNA15P30679 374 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 ARL4DP49703 201 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 DAB2P98082 770 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 PTPN12Q05209 780 aaKnown RBP3.16□□□□□ -1.9
PDE1C-208ENST00000478736 MAP3K11Q16584 847 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 AKAP4Q5JQC9 854 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 EXOSC6Q5RKV6 272 aaKnown RBP3.16□□□□□ -1.9
PDE1C-208ENST00000478736 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.16□□□□□ -1.9
PDE1C-208ENST00000478736 PRR23CQ6ZRP0 262 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 UBE3DQ7Z6J8 389 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 C2CD4AQ8NCU7 369 aaPredicted RBP3.16□□□□□ -1.9
PDE1C-208ENST00000478736 FBLIM1Q8WUP2 373 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 WDR18Q9BV38 432 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 SOX17Q9H6I2 414 aaPredicted RBP3.16□□□□□ -1.9
PDE1C-208ENST00000478736 SRA1Q9HD15 236 aaKnown RBP3.16□□□□□ -1.9
PDE1C-208ENST00000478736 FAM105AQ9NUU6 356 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 TRAK1Q9UPV9 953 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 PCDHB5Q9Y5E4 795 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 AK5Q9Y6K8 562 aa3.16□□□□□ -1.9
PDE1C-208ENST00000478736 FAM177BA6PVY3 158 aa3.15□□□□□ -1.91
PDE1C-208ENST00000478736 AOC2O75106 756 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms