RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 DLGAP5Q15398 846 aa8.46□□□□□ -1.06
BRCA1-215ENST00000478531 CFAP100Q494V2 611 aa8.46□□□□□ -1.06
BRCA1-215ENST00000478531 CCDC158Q5M9N0 1113 aa8.46□□□□□ -1.06
BRCA1-215ENST00000478531 ANGEL2Q5VTE6 544 aaKnown RBP8.46□□□□□ -1.06
BRCA1-215ENST00000478531 GLIS2Q9BZE0 524 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-215ENST00000478531 LRRCC1Q9C099 1032 aa8.46□□□□□ -1.06
BRCA1-215ENST00000478531 SNRKQ9NRH2 765 aa8.46□□□□□ -1.06
BRCA1-215ENST00000478531 ABCF2Q9UG63 623 aa8.46□□□□□ -1.06
BRCA1-215ENST00000478531 ADM5C9JUS6 153 aa8.45□□□□□ -1.06
BRCA1-215ENST00000478531 WNT10BO00744 389 aa8.45□□□□□ -1.06
BRCA1-215ENST00000478531 LDHBP07195 334 aaKnown RBP8.45□□□□□ -1.06
BRCA1-215ENST00000478531 UQCRFS1P1P0C7P4 283 aa8.45□□□□□ -1.06
BRCA1-215ENST00000478531 HSPA6P17066 643 aa8.45□□□□□ -1.06
BRCA1-215ENST00000478531 FMR1Q06787 632 aaKnown RBP eCLIP8.45□□□□□ -1.06
BRCA1-215ENST00000478531 KRT26Q7Z3Y9 468 aa8.45□□□□□ -1.06
BRCA1-215ENST00000478531 SPATA5Q8NB90 893 aa8.45□□□□□ -1.06
BRCA1-215ENST00000478531 ZC3H15Q8WU90 426 aaKnown RBP8.45□□□□□ -1.06
BRCA1-215ENST00000478531 DCPSQ96C86 337 aaKnown RBP8.45□□□□□ -1.06
BRCA1-215ENST00000478531 ZNF408Q9H9D4 720 aa8.45□□□□□ -1.06
BRCA1-215ENST00000478531 HMG20BQ9P0W2 317 aa8.45□□□□□ -1.06
BRCA1-215ENST00000478531 MAST3O60307 1309 aa8.45□□□□□ -1.06
BRCA1-215ENST00000478531 AK9Q5TCS8 1911 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 CLRN2A0PK11 232 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 CRKP46108 304 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 HTRA3P83110 453 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 DLK2Q6UY11 383 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 USP48Q86UV5 1035 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 DCTPP1Q9H773 170 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 NDUFB9Q9Y6M9 179 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 DOCK2Q92608 1830 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 AOX1Q06278 1338 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 PASKQ96RG2 1323 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 SPDYE2BA6NHP3 402 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 MYO1BO43795 1136 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 ITGBL1O95965 494 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-215ENST00000478531 SPDYE6P0CI01 402 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 MMP14P50281 582 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 AAMPQ13685 434 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 DIXDC1Q155Q3 683 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 TBC1D9Q6ZT07 1266 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 DZIP1Q86YF9 867 aaKnown RBP8.44□□□□□ -1.06
BRCA1-215ENST00000478531 SULF1Q8IWU6 871 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 ZGPATQ8N5A5 531 aaKnown RBP8.44□□□□□ -1.06
BRCA1-215ENST00000478531 TEKT1Q969V4 418 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 VEZTQ9HBM0 779 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 SERPINA10Q9UK55 444 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 MYH7P12883 1935 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 PDS5AQ29RF7 1337 aaKnown RBP8.44□□□□□ -1.06
BRCA1-215ENST00000478531 SALL1Q9NSC2 1324 aa8.44□□□□□ -1.06
BRCA1-215ENST00000478531 APLP1P51693 650 aa8.43□□□□□ -1.06
BRCA1-215ENST00000478531 CDC37L1Q7L3B6 337 aa8.43□□□□□ -1.06
BRCA1-215ENST00000478531 PRMT6Q96LA8 375 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-215ENST00000478531 PGAP2Q9UHJ9 254 aa8.43□□□□□ -1.06
BRCA1-215ENST00000478531 SUGT1Q9Y2Z0 365 aa8.43□□□□□ -1.06
BRCA1-215ENST00000478531 ZAP70P43403 619 aa8.42□□□□□ -1.06
BRCA1-215ENST00000478531 HDAC1Q13547 482 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-215ENST00000478531 SPTY2D1Q68D10 685 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-215ENST00000478531 MTMR14Q8NCE2 650 aa8.42□□□□□ -1.06
BRCA1-215ENST00000478531 ZBED3Q96IU2 234 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-215ENST00000478531 DNAJC2Q99543 621 aaKnown RBP8.42□□□□□ -1.06
BRCA1-215ENST00000478531 RNF39Q9H2S5 420 aa8.42□□□□□ -1.06
BRCA1-215ENST00000478531 TDRD3Q9H7E2 651 aaKnown RBP8.42□□□□□ -1.06
BRCA1-215ENST00000478531 RAI14Q9P0K7 980 aa8.42□□□□□ -1.06
BRCA1-215ENST00000478531 LRP2BPQ9P2M1 347 aa8.42□□□□□ -1.06
BRCA1-215ENST00000478531 ZBTB47Q9UFB7 747 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-215ENST00000478531 PITPNM2Q9BZ72 1349 aa8.42□□□□□ -1.06
BRCA1-215ENST00000478531 CELF2O95319 508 aaKnown RBP8.42□□□□□ -1.06
BRCA1-215ENST00000478531 CYP2E1P05181 493 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-215ENST00000478531 CACNB3P54284 484 aa8.42□□□□□ -1.06
BRCA1-215ENST00000478531 PRAMEF18Q5VWM3 479 aa8.42□□□□□ -1.06
BRCA1-215ENST00000478531 TSHZ3Q63HK5 1081 aa8.42□□□□□ -1.06
BRCA1-215ENST00000478531 APOBEC3FQ8IUX4 373 aaKnown RBP8.42□□□□□ -1.06
BRCA1-215ENST00000478531 RWDD1Q9H446 243 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-215ENST00000478531 CDK5RAP2Q96SN8 1893 aa8.42□□□□□ -1.06
BRCA1-215ENST00000478531 TMEM88BA6NKF7 163 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 CENPBP07199 599 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-215ENST00000478531 HDLBPQ00341 1268 aaKnown RBP8.41□□□□□ -1.06
BRCA1-215ENST00000478531 MECOMQ03112 1051 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 ANKRD45Q5TZF3 282 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 B4GALNT3Q6L9W6 998 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 GCC1Q96CN9 775 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 CDCA5Q96FF9 252 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 ZNF512BQ96KM6 892 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-215ENST00000478531 ZDHHC15Q96MV8 337 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 ZNF70Q9UC06 446 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-215ENST00000478531 ABT1Q9ULW3 272 aaKnown RBP8.41□□□□□ -1.06
BRCA1-215ENST00000478531 DAGLAQ9Y4D2 1042 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 TCP10L2B9ZVM9 353 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 IDH1O75874 414 aaKnown RBP8.41□□□□□ -1.06
BRCA1-215ENST00000478531 IGHDP01880 384 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 SPDYE2Q495Y8 402 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 HHIPL2Q6UWX4 724 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 GPATCH3Q96I76 525 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 BOLA2Q9H3K6 86 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 ANTXR1Q9H6X2 564 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 PIH1D3Q9NQM4 214 aaKnown RBP8.41□□□□□ -1.06
BRCA1-215ENST00000478531 CREBZFQ9NS37 354 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 TMOD2Q9NZR1 351 aa8.41□□□□□ -1.06
BRCA1-215ENST00000478531 GOLIM4O00461 696 aa8.4□□□□□ -1.06
BRCA1-215ENST00000478531 CST9Q5W186 159 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms