RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 SOX1O00570 391 aaPredicted RBP6.54□□□□□ -1.36
GPNMB-210ENST00000478451 ESRRAP11474 423 aaPredicted RBP6.54□□□□□ -1.36
GPNMB-210ENST00000478451 GRIA4P48058 902 aa6.54□□□□□ -1.36
GPNMB-210ENST00000478451 KIAA1211Q6ZU35 1233 aa6.54□□□□□ -1.36
GPNMB-210ENST00000478451 CCDC74AQ96AQ1 378 aa6.54□□□□□ -1.36
GPNMB-210ENST00000478451 EHD4Q9H223 541 aa6.54□□□□□ -1.36
GPNMB-210ENST00000478451 SOX17Q9H6I2 414 aaPredicted RBP6.54□□□□□ -1.36
GPNMB-210ENST00000478451 TOP2AP11388 1531 aaKnown RBP6.54□□□□□ -1.36
GPNMB-210ENST00000478451 SMARCA4P51532 1647 aa6.54□□□□□ -1.36
GPNMB-210ENST00000478451 SPRED3Q2MJR0 410 aa6.53□□□□□ -1.36
GPNMB-210ENST00000478451 CEP41Q9BYV8 373 aa6.53□□□□□ -1.36
GPNMB-210ENST00000478451 PATL2C9JE40 543 aaKnown RBP6.52□□□□□ -1.37
GPNMB-210ENST00000478451 GADD45BO75293 160 aaPredicted RBP6.52□□□□□ -1.37
GPNMB-210ENST00000478451 CD97P48960 835 aa6.52□□□□□ -1.37
GPNMB-210ENST00000478451 PCDH1Q08174 1060 aa6.52□□□□□ -1.37
GPNMB-210ENST00000478451 PRR23CQ6ZRP0 262 aa6.52□□□□□ -1.37
GPNMB-210ENST00000478451 UBL7Q96S82 380 aaPredicted RBP6.52□□□□□ -1.37
GPNMB-210ENST00000478451 RUSC1Q9BVN2 902 aa6.52□□□□□ -1.37
GPNMB-210ENST00000478451 CLEC4MQ9H2X3 399 aaPredicted RBP6.52□□□□□ -1.37
GPNMB-210ENST00000478451 TREHO43280 583 aa6.51□□□□□ -1.37
GPNMB-210ENST00000478451 PRPF40BQ6NWY9 871 aaKnown RBP6.51□□□□□ -1.37
GPNMB-210ENST00000478451 USP26Q9BXU7 913 aa6.51□□□□□ -1.37
GPNMB-210ENST00000478451 RNF208Q9H0X6 261 aa6.51□□□□□ -1.37
GPNMB-210ENST00000478451 ABCB6Q9NP58 842 aa6.51□□□□□ -1.37
GPNMB-210ENST00000478451 OAS3Q9Y6K5 1087 aaKnown RBP6.51□□□□□ -1.37
GPNMB-210ENST00000478451 CECR2Q9BXF3 1484 aa6.51□□□□□ -1.37
GPNMB-210ENST00000478451 ITPKAP23677 461 aa6.5□□□□□ -1.37
GPNMB-210ENST00000478451 GSTM4Q03013 218 aa6.5□□□□□ -1.37
GPNMB-210ENST00000478451 DSC3Q14574 896 aa6.5□□□□□ -1.37
GPNMB-210ENST00000478451 UVSSAQ2YD98 709 aa6.5□□□□□ -1.37
GPNMB-210ENST00000478451 ANKRD34AQ69YU3 496 aa6.5□□□□□ -1.37
GPNMB-210ENST00000478451 EPS8L3Q8TE67 593 aaKnown RBP6.5□□□□□ -1.37
GPNMB-210ENST00000478451 ZNF576Q9H609 170 aa6.5□□□□□ -1.37
GPNMB-210ENST00000478451 PNMA6FA0A0J9YX94 578 aa6.49□□□□□ -1.37
GPNMB-210ENST00000478451 LOC100289279A0A1B0GTE1 492 aa6.49□□□□□ -1.37
GPNMB-210ENST00000478451 PLCB3Q01970 1234 aa6.49□□□□□ -1.37
GPNMB-210ENST00000478451 GRM2Q14416 872 aa6.49□□□□□ -1.37
GPNMB-210ENST00000478451 ZNF423Q2M1K9 1284 aa6.49□□□□□ -1.37
GPNMB-210ENST00000478451 LCE4AQ5TA78 99 aa6.49□□□□□ -1.37
GPNMB-210ENST00000478451 ZSCAN29Q8IWY8 852 aaPredicted RBP6.49□□□□□ -1.37
GPNMB-210ENST00000478451 ARMC10Q8N2F6 343 aa6.49□□□□□ -1.37
GPNMB-210ENST00000478451 UTP4Q969X6 686 aaKnown RBP6.49□□□□□ -1.37
GPNMB-210ENST00000478451 FAM46AQ96IP4 442 aaKnown RBP6.49□□□□□ -1.37
GPNMB-210ENST00000478451 TRAK1Q9UPV9 953 aa6.49□□□□□ -1.37
GPNMB-210ENST00000478451 MEGF11A6BM72 1044 aa6.48□□□□□ -1.37
GPNMB-210ENST00000478451 DHX15O43143 795 aaKnown RBP6.48□□□□□ -1.37
GPNMB-210ENST00000478451 SART1O43290 800 aaKnown RBP6.48□□□□□ -1.37
GPNMB-210ENST00000478451 EIF4EBP3O60516 100 aaPredicted RBP6.48□□□□□ -1.37
GPNMB-210ENST00000478451 B3GALT4O96024 378 aa6.48□□□□□ -1.37
GPNMB-210ENST00000478451 PREPP48147 710 aa6.48□□□□□ -1.37
GPNMB-210ENST00000478451 GP2P55259 537 aaKnown RBP6.48□□□□□ -1.37
GPNMB-210ENST00000478451 PTPN12Q05209 780 aaKnown RBP6.48□□□□□ -1.37
GPNMB-210ENST00000478451 ENOX2Q16206 610 aaKnown RBP6.48□□□□□ -1.37
GPNMB-210ENST00000478451 FDX2Q6P4F2 183 aa6.48□□□□□ -1.37
GPNMB-210ENST00000478451 PI16Q6UXB8 463 aa6.48□□□□□ -1.37
GPNMB-210ENST00000478451 GLIS3Q8NEA6 775 aa6.48□□□□□ -1.37
GPNMB-210ENST00000478451 ASB16Q96NS5 453 aa6.48□□□□□ -1.37
GPNMB-210ENST00000478451 NRSN2Q9GZP1 204 aa6.48□□□□□ -1.37
GPNMB-210ENST00000478451 NLRP2Q9NX02 1062 aa6.48□□□□□ -1.37
GPNMB-210ENST00000478451 EEA1Q15075 1411 aa6.48□□□□□ -1.37
GPNMB-210ENST00000478451 SMARCA2P51531 1590 aa6.48□□□□□ -1.37
GPNMB-210ENST00000478451 TMEM238LA0A1B0GVL6 79 aa6.47□□□□□ -1.37
GPNMB-210ENST00000478451 ZBTB7CA1YPR0 619 aa6.47□□□□□ -1.37
GPNMB-210ENST00000478451 DLGAP3O95886 979 aa6.47□□□□□ -1.37
GPNMB-210ENST00000478451 SSTR4P31391 388 aa6.47□□□□□ -1.37
GPNMB-210ENST00000478451 FMR1Q06787 632 aaKnown RBP eCLIP6.47□□□□□ -1.37
GPNMB-210ENST00000478451 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.47□□□□□ -1.37
GPNMB-210ENST00000478451 MYRFLQ96LU7 910 aa6.47□□□□□ -1.37
GPNMB-210ENST00000478451 TMPRSS13Q9BYE2 586 aa6.47□□□□□ -1.37
GPNMB-210ENST00000478451 RAXQ9Y2V3 346 aa6.47□□□□□ -1.37
GPNMB-210ENST00000478451 KIAA1324LA8MWY0 1029 aaPredicted RBP6.46□□□□□ -1.38
GPNMB-210ENST00000478451 FSTP19883 344 aa6.46□□□□□ -1.38
GPNMB-210ENST00000478451 MAPK8P45983 427 aa6.46□□□□□ -1.38
GPNMB-210ENST00000478451 NUTM2GQ5VZR2 741 aa6.46□□□□□ -1.38
GPNMB-210ENST00000478451 KRTAP5-3Q6L8H2 238 aa6.46□□□□□ -1.38
GPNMB-210ENST00000478451 DDX54Q8TDD1 881 aaKnown RBP6.46□□□□□ -1.38
GPNMB-210ENST00000478451 TRIM56Q9BRZ2 755 aaKnown RBP6.46□□□□□ -1.38
GPNMB-210ENST00000478451 GAS2O43903 313 aaKnown RBP6.45□□□□□ -1.38
GPNMB-210ENST00000478451 CYP11A1P05108 521 aa6.45□□□□□ -1.38
GPNMB-210ENST00000478451 MAOBP27338 520 aa6.45□□□□□ -1.38
GPNMB-210ENST00000478451 POU4F3Q15319 338 aa6.45□□□□□ -1.38
GPNMB-210ENST00000478451 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.45□□□□□ -1.38
GPNMB-210ENST00000478451 RPS26P11Q5JNZ5 115 aaPredicted RBP6.45□□□□□ -1.38
GPNMB-210ENST00000478451 SMG8Q8ND04 991 aaKnown RBP6.45□□□□□ -1.38
GPNMB-210ENST00000478451 BCO2Q9BYV7 579 aa6.45□□□□□ -1.38
GPNMB-210ENST00000478451 GZF1Q9H116 711 aaPredicted RBP6.45□□□□□ -1.38
GPNMB-210ENST00000478451 SUGCTQ9HAC7 445 aa6.45□□□□□ -1.38
GPNMB-210ENST00000478451 CYP4F12Q9HCS2 524 aa6.45□□□□□ -1.38
GPNMB-210ENST00000478451 STOML1Q9UBI4 398 aa6.45□□□□□ -1.38
GPNMB-210ENST00000478451 HIF3AQ9Y2N7 669 aa6.45□□□□□ -1.38
GPNMB-210ENST00000478451 TIAF1O95411 115 aa6.44□□□□□ -1.38
GPNMB-210ENST00000478451 CTSBP07858 339 aa6.44□□□□□ -1.38
GPNMB-210ENST00000478451 BMP3P12645 472 aa6.44□□□□□ -1.38
GPNMB-210ENST00000478451 FCGRTP55899 365 aa6.44□□□□□ -1.38
GPNMB-210ENST00000478451 EXOSC6Q5RKV6 272 aaKnown RBP6.44□□□□□ -1.38
GPNMB-210ENST00000478451 HP1BP3Q5SSJ5 553 aaPredicted RBP6.44□□□□□ -1.38
GPNMB-210ENST00000478451 DTHD1Q6ZMT9 781 aa6.44□□□□□ -1.38
GPNMB-210ENST00000478451 FAM20CQ8IXL6 584 aa6.44□□□□□ -1.38
GPNMB-210ENST00000478451 FBF1Q8TES7 1133 aa6.44□□□□□ -1.38
GPNMB-210ENST00000478451 CORO1BQ9BR76 489 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms