RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 ZNF274Q96GC6 653 aaPredicted RBP17.25■□□□□ 0.35
U2AF1-210ENST00000478282 DBNDD2Q9BQY9 259 aa17.25■□□□□ 0.35
U2AF1-210ENST00000478282 ITGB4P16144 1822 aa17.25■□□□□ 0.35
U2AF1-210ENST00000478282 CCP110O43303 1012 aa17.24■□□□□ 0.35
U2AF1-210ENST00000478282 PDIA3P30101 505 aaKnown RBP17.24■□□□□ 0.35
U2AF1-210ENST00000478282 PTPN12Q05209 780 aaKnown RBP17.24■□□□□ 0.35
U2AF1-210ENST00000478282 USP21Q9UK80 565 aa17.24■□□□□ 0.35
U2AF1-210ENST00000478282 ZBTB22O15209 634 aa17.24■□□□□ 0.35
U2AF1-210ENST00000478282 ZRANB2O95218 330 aaKnown RBP eCLIP17.24■□□□□ 0.35
U2AF1-210ENST00000478282 PLA2G4AP47712 749 aa17.24■□□□□ 0.35
U2AF1-210ENST00000478282 NLRP12P59046 1061 aa17.24■□□□□ 0.35
U2AF1-210ENST00000478282 IRX5P78411 483 aaPredicted RBP17.24■□□□□ 0.35
U2AF1-210ENST00000478282 NCAPHQ15003 741 aa17.24■□□□□ 0.35
U2AF1-210ENST00000478282 HOMER1Q86YM7 354 aa17.24■□□□□ 0.35
U2AF1-210ENST00000478282 CHMP4CQ96CF2 233 aa17.24■□□□□ 0.35
U2AF1-210ENST00000478282 DSCC1Q9BVC3 393 aa17.24■□□□□ 0.35
U2AF1-210ENST00000478282 ARGLU1Q9NWB6 273 aaPredicted RBP17.24■□□□□ 0.35
U2AF1-210ENST00000478282 NAP1L2Q9ULW6 460 aaPredicted RBP17.24■□□□□ 0.35
U2AF1-210ENST00000478282 AFF2P51816 1311 aa17.24■□□□□ 0.35
U2AF1-210ENST00000478282 PPFIA3O75145 1194 aa17.24■□□□□ 0.35
U2AF1-210ENST00000478282 STK38Q15208 465 aa17.24■□□□□ 0.35
U2AF1-210ENST00000478282 KCNG4Q8TDN1 519 aa17.24■□□□□ 0.35
U2AF1-210ENST00000478282 SLC3A2P08195 630 aaKnown RBP17.23■□□□□ 0.35
U2AF1-210ENST00000478282 SF3A1Q15459 793 aaKnown RBP17.23■□□□□ 0.35
U2AF1-210ENST00000478282 ORC3Q9UBD5 711 aaPredicted RBP17.23■□□□□ 0.35
U2AF1-210ENST00000478282 PALLDQ8WX93 1383 aa17.23■□□□□ 0.35
U2AF1-210ENST00000478282 FDPSP14324 419 aaKnown RBP17.23■□□□□ 0.35
U2AF1-210ENST00000478282 DNAI1Q9UI46 699 aa17.23■□□□□ 0.35
U2AF1-210ENST00000478282 CLIC4Q9Y696 253 aa17.23■□□□□ 0.35
U2AF1-210ENST00000478282 E7EWF7 191 aa17.23■□□□□ 0.35
U2AF1-210ENST00000478282 YEATS4O95619 227 aa17.23■□□□□ 0.35
U2AF1-210ENST00000478282 UBXN4Q92575 508 aa17.23■□□□□ 0.35
U2AF1-210ENST00000478282 DCAF5Q96JK2 942 aa17.23■□□□□ 0.35
U2AF1-210ENST00000478282 MYD88Q99836 296 aa17.23■□□□□ 0.35
U2AF1-210ENST00000478282 TMCO3Q6UWJ1 677 aa17.22■□□□□ 0.35
U2AF1-210ENST00000478282 FMNL2Q96PY5 1086 aa17.22■□□□□ 0.35
U2AF1-210ENST00000478282 METTL22Q9BUU2 404 aaPredicted RBP17.22■□□□□ 0.35
U2AF1-210ENST00000478282 HELLSQ9NRZ9 838 aa17.22■□□□□ 0.35
U2AF1-210ENST00000478282 BIN1O00499 593 aa17.22■□□□□ 0.35
U2AF1-210ENST00000478282 FANCCQ00597 558 aa17.22■□□□□ 0.35
U2AF1-210ENST00000478282 GORABQ5T7V8 394 aa17.22■□□□□ 0.35
U2AF1-210ENST00000478282 SRRTQ9BXP5 876 aaKnown RBP17.22■□□□□ 0.35
U2AF1-210ENST00000478282 POLR3EQ9NVU0 708 aa17.22■□□□□ 0.35
U2AF1-210ENST00000478282 C5P01031 1676 aa17.21■□□□□ 0.35
U2AF1-210ENST00000478282 BCL9O00512 1426 aa17.21■□□□□ 0.35
U2AF1-210ENST00000478282 IKBKBO14920 756 aa17.21■□□□□ 0.35
U2AF1-210ENST00000478282 SPTLC2O15270 562 aa17.21■□□□□ 0.35
U2AF1-210ENST00000478282 TRIM65Q6PJ69 517 aa17.21■□□□□ 0.35
U2AF1-210ENST00000478282 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.21■□□□□ 0.35
U2AF1-210ENST00000478282 ZNF202O95125 648 aa17.21■□□□□ 0.34
U2AF1-210ENST00000478282 MNS1Q8NEH6 495 aa17.21■□□□□ 0.34
U2AF1-210ENST00000478282 XAGE3Q8WTP9 111 aa17.21■□□□□ 0.34
U2AF1-210ENST00000478282 DOT1LQ8TEK3 1739 aa17.2■□□□□ 0.34
U2AF1-210ENST00000478282 TADA3O75528 432 aa17.2■□□□□ 0.34
U2AF1-210ENST00000478282 LMOD1P29536 600 aaPredicted RBP17.2■□□□□ 0.34
U2AF1-210ENST00000478282 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
U2AF1-210ENST00000478282 AFDNP55196 1824 aaKnown RBP17.2■□□□□ 0.34
U2AF1-210ENST00000478282 A0A0G2JLW4 131 aa17.2■□□□□ 0.34
U2AF1-210ENST00000478282 MYL6BP14649 208 aa17.2■□□□□ 0.34
U2AF1-210ENST00000478282 TULP2O00295 520 aa17.19■□□□□ 0.34
U2AF1-210ENST00000478282 CHST3Q7LGC8 479 aa17.19■□□□□ 0.34
U2AF1-210ENST00000478282 ZMYM1Q5SVZ6 1142 aa17.19■□□□□ 0.34
U2AF1-210ENST00000478282 OTUD7BQ6GQQ9 843 aa17.19■□□□□ 0.34
U2AF1-210ENST00000478282 C8orf76Q96K31 380 aa17.19■□□□□ 0.34
U2AF1-210ENST00000478282 GJD4Q96KN9 370 aaPredicted RBP17.19■□□□□ 0.34
U2AF1-210ENST00000478282 HSD3B7Q9H2F3 369 aa17.19■□□□□ 0.34
U2AF1-210ENST00000478282 POLR3DP05423 398 aaPredicted RBP17.19■□□□□ 0.34
U2AF1-210ENST00000478282 HSPD1P10809 573 aaKnown RBP17.19■□□□□ 0.34
U2AF1-210ENST00000478282 MYSM1Q5VVJ2 828 aa17.19■□□□□ 0.34
U2AF1-210ENST00000478282 COPS6Q7L5N1 327 aa17.19■□□□□ 0.34
U2AF1-210ENST00000478282 TMX1Q9H3N1 280 aa17.19■□□□□ 0.34
U2AF1-210ENST00000478282 EFCAB8A8MWE9 144 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 GOLIM4O00461 696 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 TPM1P09493 284 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 CDK11BP21127 795 aaKnown RBP17.18■□□□□ 0.34
U2AF1-210ENST00000478282 EVCP57679 992 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 LRRFIP1Q32MZ4 808 aaKnown RBP17.18■□□□□ 0.34
U2AF1-210ENST00000478282 TEX35Q5T0J7 233 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 MEX3CQ5U5Q3 659 aaKnown RBP17.18■□□□□ 0.34
U2AF1-210ENST00000478282 BRAPQ7Z569 592 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 FBXL16Q8N461 479 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 PAG1Q9NWQ8 432 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 TRPC5Q9UL62 973 aaPredicted RBP17.18■□□□□ 0.34
U2AF1-210ENST00000478282 CICQ96RK0 1608 aaPredicted RBP17.18■□□□□ 0.34
U2AF1-210ENST00000478282 ERVV-2B6SEH9 535 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 FANCGO15287 622 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 ATP8B1O43520 1251 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 URI1O94763 535 aaPredicted RBP17.18■□□□□ 0.34
U2AF1-210ENST00000478282 ATP1A3P13637 1013 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 REXO1L1PQ8IX06 675 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 SLC52A2Q9HAB3 445 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 CBFA2T2O43439 604 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 PFKFB1P16118 471 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 HNRNPH2P55795 449 aaKnown RBP17.18■□□□□ 0.34
U2AF1-210ENST00000478282 CCDC158Q5M9N0 1113 aa17.18■□□□□ 0.34
U2AF1-210ENST00000478282 CMA1P23946 247 aa17.17■□□□□ 0.34
U2AF1-210ENST00000478282 AXDND1Q5T1B0 1012 aaPredicted RBP17.17■□□□□ 0.34
U2AF1-210ENST00000478282 UBE3BQ7Z3V4 1068 aa17.17■□□□□ 0.34
U2AF1-210ENST00000478282 FCHSD1Q86WN1 690 aa17.17■□□□□ 0.34
U2AF1-210ENST00000478282 TICAM2Q86XR7 235 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms