RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 FAM95CA0A1B0GW59 222 aa9.04□□□□□ -0.96
SYCP3-205ENST00000478238 CPNE3O75131 537 aaKnown RBP9.04□□□□□ -0.96
SYCP3-205ENST00000478238 ADAMTS4O75173 837 aa9.04□□□□□ -0.96
SYCP3-205ENST00000478238 USP11P51784 963 aa9.04□□□□□ -0.96
SYCP3-205ENST00000478238 GP2P55259 537 aaKnown RBP9.04□□□□□ -0.96
SYCP3-205ENST00000478238 SOX4Q06945 474 aaPredicted RBP9.04□□□□□ -0.96
SYCP3-205ENST00000478238 CDPF1Q6NVV7 123 aa9.04□□□□□ -0.96
SYCP3-205ENST00000478238 TXNDC2Q86VQ3 553 aa9.04□□□□□ -0.96
SYCP3-205ENST00000478238 DTX1Q86Y01 620 aa9.04□□□□□ -0.96
SYCP3-205ENST00000478238 FBLIM1Q8WUP2 373 aa9.04□□□□□ -0.96
SYCP3-205ENST00000478238 NPHS2Q9NP85 383 aa9.04□□□□□ -0.96
SYCP3-205ENST00000478238 CYP11A1P05108 521 aa9.03□□□□□ -0.96
SYCP3-205ENST00000478238 F13BP05160 661 aa9.03□□□□□ -0.96
SYCP3-205ENST00000478238 CTSBP07858 339 aa9.03□□□□□ -0.96
SYCP3-205ENST00000478238 MAOBP27338 520 aa9.03□□□□□ -0.96
SYCP3-205ENST00000478238 NFKBIBQ15653 356 aa9.03□□□□□ -0.96
SYCP3-205ENST00000478238 GIMAP7Q8NHV1 300 aa9.03□□□□□ -0.96
SYCP3-205ENST00000478238 CITED4Q96RK1 184 aa9.03□□□□□ -0.96
SYCP3-205ENST00000478238 EHD4Q9H223 541 aa9.03□□□□□ -0.96
SYCP3-205ENST00000478238 OAS3Q9Y6K5 1087 aaKnown RBP9.03□□□□□ -0.96
SYCP3-205ENST00000478238 ADH5P11766 374 aa9.02□□□□□ -0.97
SYCP3-205ENST00000478238 HOXA10P31260 410 aaPredicted RBP9.02□□□□□ -0.97
SYCP3-205ENST00000478238 POU4F3Q15319 338 aa9.02□□□□□ -0.97
SYCP3-205ENST00000478238 PAOXQ6QHF9 649 aa9.02□□□□□ -0.97
SYCP3-205ENST00000478238 FBXL6Q8N531 539 aa9.02□□□□□ -0.97
SYCP3-205ENST00000478238 ZNF576Q9H609 170 aa9.02□□□□□ -0.97
SYCP3-205ENST00000478238 ATG3Q9NT62 314 aa9.02□□□□□ -0.97
SYCP3-205ENST00000478238 PIM2Q9P1W9 311 aa9.02□□□□□ -0.97
SYCP3-205ENST00000478238 B3GALT4O96024 378 aa9.01□□□□□ -0.97
SYCP3-205ENST00000478238 IGHA2P01877 340 aa9.01□□□□□ -0.97
SYCP3-205ENST00000478238 ITPKAP23677 461 aa9.01□□□□□ -0.97
SYCP3-205ENST00000478238 TRIM56Q9BRZ2 755 aaKnown RBP9.01□□□□□ -0.97
SYCP3-205ENST00000478238 COL17A1Q9UMD9 1497 aaPredicted RBP9.01□□□□□ -0.97
SYCP3-205ENST00000478238 GPR182O15218 404 aa9□□□□□ -0.97
SYCP3-205ENST00000478238 IRAK1P51617 712 aa9□□□□□ -0.97
SYCP3-205ENST00000478238 HP1BP3Q5SSJ5 553 aaPredicted RBP9□□□□□ -0.97
SYCP3-205ENST00000478238 SHISA5Q8N114 240 aa9□□□□□ -0.97
SYCP3-205ENST00000478238 EZH1Q92800 747 aaPredicted RBP9□□□□□ -0.97
SYCP3-205ENST00000478238 YIPF2Q9BWQ6 316 aa9□□□□□ -0.97
SYCP3-205ENST00000478238 OSBPL1AQ9BXW6 950 aa9□□□□□ -0.97
SYCP3-205ENST00000478238 LEMD3Q9Y2U8 911 aa9□□□□□ -0.97
SYCP3-205ENST00000478238 ACTL7BQ9Y614 415 aa9□□□□□ -0.97
SYCP3-205ENST00000478238 EIF1AYO14602 144 aaKnown RBP8.99□□□□□ -0.97
SYCP3-205ENST00000478238 ECEL1O95672 775 aa8.99□□□□□ -0.97
SYCP3-205ENST00000478238 WNT11O96014 354 aa8.99□□□□□ -0.97
SYCP3-205ENST00000478238 DDX54Q8TDD1 881 aaKnown RBP8.99□□□□□ -0.97
SYCP3-205ENST00000478238 CCDC74AQ96AQ1 378 aa8.99□□□□□ -0.97
SYCP3-205ENST00000478238 CORO1BQ9BR76 489 aa8.99□□□□□ -0.97
SYCP3-205ENST00000478238 NIF3L1Q9GZT8 377 aa8.99□□□□□ -0.97
SYCP3-205ENST00000478238 DNAJC25Q9H1X3 360 aa8.99□□□□□ -0.97
SYCP3-205ENST00000478238 ZFYVE1Q9HBF4 777 aa8.99□□□□□ -0.97
SYCP3-205ENST00000478238 CPSF6Q16630 551 aaKnown RBP eCLIP8.98□□□□□ -0.97
SYCP3-205ENST00000478238 AKAP4Q5JQC9 854 aa8.98□□□□□ -0.97
SYCP3-205ENST00000478238 TMC1Q8TDI8 760 aa8.98□□□□□ -0.97
SYCP3-205ENST00000478238 ABCB6Q9NP58 842 aa8.98□□□□□ -0.97
SYCP3-205ENST00000478238 PRKAG2Q9UGJ0 569 aa8.98□□□□□ -0.97
SYCP3-205ENST00000478238 FOSL1P15407 271 aa8.97□□□□□ -0.97
SYCP3-205ENST00000478238 ADMP35318 185 aa8.97□□□□□ -0.97
SYCP3-205ENST00000478238 PTPN12Q05209 780 aaKnown RBP8.97□□□□□ -0.97
SYCP3-205ENST00000478238 PRPF40BQ6NWY9 871 aaKnown RBP8.97□□□□□ -0.97
SYCP3-205ENST00000478238 CCER1Q8TC90 406 aaPredicted RBP8.97□□□□□ -0.97
SYCP3-205ENST00000478238 TBC1D32Q96NH3 1257 aa8.97□□□□□ -0.97
SYCP3-205ENST00000478238 KRTAP4-12Q9BQ66 201 aa8.97□□□□□ -0.97
SYCP3-205ENST00000478238 RAD18Q9NS91 495 aa8.97□□□□□ -0.97
SYCP3-205ENST00000478238 GADD45BO75293 160 aaPredicted RBP8.96□□□□□ -0.98
SYCP3-205ENST00000478238 RAB6AP20340 208 aa8.96□□□□□ -0.98
SYCP3-205ENST00000478238 PDE4CQ08493 712 aa8.96□□□□□ -0.98
SYCP3-205ENST00000478238 MSMPQ1L6U9 139 aa8.96□□□□□ -0.98
SYCP3-205ENST00000478238 DYMQ7RTS9 669 aa8.96□□□□□ -0.98
SYCP3-205ENST00000478238 ZAR1Q86SH2 424 aa8.96□□□□□ -0.98
SYCP3-205ENST00000478238 METTL22Q9BUU2 404 aaPredicted RBP8.96□□□□□ -0.98
SYCP3-205ENST00000478238 AP4E1Q9UPM8 1137 aa8.96□□□□□ -0.98
SYCP3-205ENST00000478238 TMEM238LA0A1B0GVL6 79 aa8.95□□□□□ -0.98
SYCP3-205ENST00000478238 NFICP08651 508 aa8.95□□□□□ -0.98
SYCP3-205ENST00000478238 GATA6Q92908 595 aa8.95□□□□□ -0.98
SYCP3-205ENST00000478238 ALKBH8Q96BT7 664 aaKnown RBP8.95□□□□□ -0.98
SYCP3-205ENST00000478238 DMRTB1Q96MA1 342 aa8.95□□□□□ -0.98
SYCP3-205ENST00000478238 RBCK1Q9BYM8 510 aa8.95□□□□□ -0.98
SYCP3-205ENST00000478238 FAM105AQ9NUU6 356 aa8.95□□□□□ -0.98
SYCP3-205ENST00000478238 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.94□□□□□ -0.98
SYCP3-205ENST00000478238 TAL1P17542 331 aaPredicted RBP8.94□□□□□ -0.98
SYCP3-205ENST00000478238 AP3B2Q13367 1082 aa8.94□□□□□ -0.98
SYCP3-205ENST00000478238 MAP7Q14244 749 aa8.94□□□□□ -0.98
SYCP3-205ENST00000478238 PDE3AQ14432 1141 aa8.94□□□□□ -0.98
SYCP3-205ENST00000478238 RPS26P11Q5JNZ5 115 aaPredicted RBP8.94□□□□□ -0.98
SYCP3-205ENST00000478238 CSRNP1Q96S65 589 aa8.94□□□□□ -0.98
SYCP3-205ENST00000478238 SEMA6CQ9H3T2 930 aa8.94□□□□□ -0.98
SYCP3-205ENST00000478238 ACSS3Q9H6R3 686 aa8.94□□□□□ -0.98
SYCP3-205ENST00000478238 TRAK1Q9UPV9 953 aa8.94□□□□□ -0.98
SYCP3-205ENST00000478238 FAM170BA6NMN3 283 aa8.93□□□□□ -0.98
SYCP3-205ENST00000478238 AOC2O75106 756 aa8.93□□□□□ -0.98
SYCP3-205ENST00000478238 GRM2Q14416 872 aa8.93□□□□□ -0.98
SYCP3-205ENST00000478238 GLIS3Q8NEA6 775 aa8.93□□□□□ -0.98
SYCP3-205ENST00000478238 WDR18Q9BV38 432 aa8.93□□□□□ -0.98
SYCP3-205ENST00000478238 GSX1Q9H4S2 264 aaPredicted RBP8.93□□□□□ -0.98
SYCP3-205ENST00000478238 SOWAHDA6NJG2 315 aa8.92□□□□□ -0.98
SYCP3-205ENST00000478238 CYP26A1O43174 497 aa8.92□□□□□ -0.98
SYCP3-205ENST00000478238 PAX4O43316 350 aa8.92□□□□□ -0.98
SYCP3-205ENST00000478238 ASPAP45381 313 aa8.92□□□□□ -0.98
SYCP3-205ENST00000478238 FAAP100Q0VG06 881 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms