RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CHD4Q14839 1912 aa6.21□□□□□ -1.41
SF3B6-202ENST00000478050 TMEM2Q9UHN6 1383 aa6.21□□□□□ -1.41
SF3B6-202ENST00000478050 CACNA1FO60840 1977 aa6.21□□□□□ -1.42
SF3B6-202ENST00000478050 SPDYE3A6NKU9 549 aa6.21□□□□□ -1.42
SF3B6-202ENST00000478050 ATXN7O15265 892 aaPredicted RBP6.21□□□□□ -1.42
SF3B6-202ENST00000478050 TRIM27P14373 513 aa6.21□□□□□ -1.42
SF3B6-202ENST00000478050 LTKP29376 864 aa6.21□□□□□ -1.42
SF3B6-202ENST00000478050 PRKAR2BP31323 418 aa6.21□□□□□ -1.42
SF3B6-202ENST00000478050 GNAI1P63096 354 aa6.21□□□□□ -1.42
SF3B6-202ENST00000478050 PRRT3Q5FWE3 981 aa6.21□□□□□ -1.42
SF3B6-202ENST00000478050 ARTNQ5T4W7 220 aa6.21□□□□□ -1.42
SF3B6-202ENST00000478050 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.21□□□□□ -1.42
SF3B6-202ENST00000478050 FNBP4Q8N3X1 1017 aaPredicted RBP6.21□□□□□ -1.42
SF3B6-202ENST00000478050 NUDT16Q96DE0 195 aaKnown RBP6.21□□□□□ -1.42
SF3B6-202ENST00000478050 COG3Q96JB2 828 aa6.21□□□□□ -1.42
SF3B6-202ENST00000478050 GJD4Q96KN9 370 aaPredicted RBP6.21□□□□□ -1.42
SF3B6-202ENST00000478050 PRR12Q9ULL5 1215 aa6.21□□□□□ -1.42
SF3B6-202ENST00000478050 HRH3Q9Y5N1 445 aa6.21□□□□□ -1.42
SF3B6-202ENST00000478050 PTCH1Q13635 1447 aa6.21□□□□□ -1.42
SF3B6-202ENST00000478050 USP54Q70EL1 1684 aa6.2□□□□□ -1.42
SF3B6-202ENST00000478050 PIK3R4Q99570 1358 aa6.2□□□□□ -1.42
SF3B6-202ENST00000478050 PLEKHG1Q9ULL1 1385 aa6.2□□□□□ -1.42
SF3B6-202ENST00000478050 ADAMTS13Q76LX8 1427 aa6.2□□□□□ -1.42
SF3B6-202ENST00000478050 ZBTB7CA1YPR0 619 aa6.2□□□□□ -1.42
SF3B6-202ENST00000478050 IL13P35225 146 aa6.2□□□□□ -1.42
SF3B6-202ENST00000478050 COL13A1Q5TAT6 717 aaPredicted RBP6.2□□□□□ -1.42
SF3B6-202ENST00000478050 NLRP8Q86W28 1048 aa6.2□□□□□ -1.42
SF3B6-202ENST00000478050 ITPRIPQ8IWB1 547 aa6.2□□□□□ -1.42
SF3B6-202ENST00000478050 SMC5Q8IY18 1101 aa6.2□□□□□ -1.42
SF3B6-202ENST00000478050 ARHGAP45Q92619 1136 aa6.2□□□□□ -1.42
SF3B6-202ENST00000478050 AIDAQ96BJ3 306 aa6.2□□□□□ -1.42
SF3B6-202ENST00000478050 TRIM11Q96F44 468 aa6.2□□□□□ -1.42
SF3B6-202ENST00000478050 IFT57Q9NWB7 429 aa6.2□□□□□ -1.42
SF3B6-202ENST00000478050 NOB1Q9ULX3 412 aaKnown RBP6.2□□□□□ -1.42
SF3B6-202ENST00000478050 RGPD8O14715 1765 aaPredicted RBP6.2□□□□□ -1.42
SF3B6-202ENST00000478050 PEAK1Q9H792 1746 aa6.19□□□□□ -1.42
SF3B6-202ENST00000478050 OVOS2A0A0J9YW53 1432 aa6.19□□□□□ -1.42
SF3B6-202ENST00000478050 OVOS2Q6IE36 1432 aa6.19□□□□□ -1.42
SF3B6-202ENST00000478050 PLA2G4AP47712 749 aa6.19□□□□□ -1.42
SF3B6-202ENST00000478050 TLR1Q15399 786 aa6.19□□□□□ -1.42
SF3B6-202ENST00000478050 NFKBIBQ15653 356 aa6.19□□□□□ -1.42
SF3B6-202ENST00000478050 FOXD4L6Q3SYB3 417 aaPredicted RBP6.19□□□□□ -1.42
SF3B6-202ENST00000478050 FOXD4L3Q6VB84 417 aaPredicted RBP6.19□□□□□ -1.42
SF3B6-202ENST00000478050 BRINP3Q76B58 766 aa6.19□□□□□ -1.42
SF3B6-202ENST00000478050 NME9Q86XW9 330 aa6.19□□□□□ -1.42
SF3B6-202ENST00000478050 TMEM57Q8N5G2 664 aa6.19□□□□□ -1.42
SF3B6-202ENST00000478050 AVENQ9NQS1 362 aaPredicted RBP6.19□□□□□ -1.42
SF3B6-202ENST00000478050 ZBTB40Q9NUA8 1239 aa6.19□□□□□ -1.42
SF3B6-202ENST00000478050 SLIT1O75093 1534 aa6.19□□□□□ -1.42
SF3B6-202ENST00000478050 KIF24Q5T7B8 1368 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 DCDC2BA2VCK2 349 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 FAM83GA6ND36 823 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 KHNYNO15037 678 aaKnown RBP6.18□□□□□ -1.42
SF3B6-202ENST00000478050 KCNQ2O43526 872 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 DYRK3O43781 588 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 ZNF853P0CG23 659 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 MAPTP10636 758 aaKnown RBP6.18□□□□□ -1.42
SF3B6-202ENST00000478050 CD33P20138 364 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 PCBP4P57723 403 aaKnown RBP6.18□□□□□ -1.42
SF3B6-202ENST00000478050 ARSJQ5FYB0 599 aaPredicted RBP6.18□□□□□ -1.42
SF3B6-202ENST00000478050 NKAPLQ5M9Q1 402 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 FCHSD1Q86WN1 690 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 C1orf216Q8TAB5 229 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 TBC1D32Q96NH3 1257 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 SLC26A8Q96RN1 970 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 CDCA7Q9BWT1 371 aaPredicted RBP6.18□□□□□ -1.42
SF3B6-202ENST00000478050 SNRKQ9NRH2 765 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 TPSG1Q9NRR2 321 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 KLF15Q9UIH9 416 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 XRN1Q8IZH2 1706 aaKnown RBP6.18□□□□□ -1.42
SF3B6-202ENST00000478050 PRR36Q9H6K5 1346 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 N4BP2Q86UW6 1770 aaPredicted RBP6.18□□□□□ -1.42
SF3B6-202ENST00000478050 ROBO2Q9HCK4 1378 aa6.18□□□□□ -1.42
SF3B6-202ENST00000478050 USP6P35125 1406 aa6.17□□□□□ -1.42
SF3B6-202ENST00000478050 NCOA3Q9Y6Q9 1424 aa6.17□□□□□ -1.42
SF3B6-202ENST00000478050 CAMTA1Q9Y6Y1 1673 aa6.17□□□□□ -1.42
SF3B6-202ENST00000478050 VAMP4O75379 141 aa6.17□□□□□ -1.42
SF3B6-202ENST00000478050 HMOX1P09601 288 aa6.17□□□□□ -1.42
SF3B6-202ENST00000478050 ALAS2P22557 587 aa6.17□□□□□ -1.42
SF3B6-202ENST00000478050 FAM182BQ5T319 152 aa6.17□□□□□ -1.42
SF3B6-202ENST00000478050 KRT27Q7Z3Y8 459 aa6.17□□□□□ -1.42
SF3B6-202ENST00000478050 PHACTR3Q96KR7 559 aa6.17□□□□□ -1.42
SF3B6-202ENST00000478050 API5Q9BZZ5 524 aaKnown RBP6.17□□□□□ -1.42
SF3B6-202ENST00000478050 C19orf44Q9H6X5 657 aa6.17□□□□□ -1.42
SF3B6-202ENST00000478050 DNAAF2Q9NVR5 837 aaKnown RBP6.17□□□□□ -1.42
SF3B6-202ENST00000478050 SERPINA10Q9UK55 444 aa6.17□□□□□ -1.42
SF3B6-202ENST00000478050 GJA3Q9Y6H8 435 aa6.17□□□□□ -1.42
SF3B6-202ENST00000478050 TTC21BQ7Z4L5 1316 aa6.17□□□□□ -1.42
SF3B6-202ENST00000478050 USP31Q70CQ4 1352 aa6.17□□□□□ -1.42
SF3B6-202ENST00000478050 MARF1Q9Y4F3 1742 aaKnown RBP6.16□□□□□ -1.42
SF3B6-202ENST00000478050 EIF5BO60841 1220 aaKnown RBP6.16□□□□□ -1.42
SF3B6-202ENST00000478050 NUCB1Q02818 461 aa6.16□□□□□ -1.42
SF3B6-202ENST00000478050 TNP2Q05952 138 aa6.16□□□□□ -1.42
SF3B6-202ENST00000478050 KRTAP19-1Q8IUB9 90 aa6.16□□□□□ -1.42
SF3B6-202ENST00000478050 GCC1Q96CN9 775 aa6.16□□□□□ -1.42
SF3B6-202ENST00000478050 NIFKQ9BYG3 293 aaKnown RBP6.16□□□□□ -1.42
SF3B6-202ENST00000478050 LRRC37A3O60309 1634 aa6.16□□□□□ -1.42
SF3B6-202ENST00000478050 ABCC4O15439 1325 aa6.16□□□□□ -1.42
SF3B6-202ENST00000478050 TTC21AQ8NDW8 1320 aa6.16□□□□□ -1.42
SF3B6-202ENST00000478050 PIK3C2AO00443 1686 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms