RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ARL4DP49703 201 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 GRIK4Q16099 956 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 SPRED3Q2MJR0 410 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 GLIPR1L2Q4G1C9 344 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 SPTY2D1Q68D10 685 aaPredicted RBP4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 NXPE4Q6UWF7 544 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 FBXO33Q7Z6M2 555 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 GLIS3Q8NEA6 775 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 CARD10Q9BWT7 1032 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 CLEC4MQ9H2X3 399 aaPredicted RBP4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 ZNF576Q9H609 170 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 ZFYVE1Q9HBF4 777 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 OSGEPQ9NPF4 335 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 SEC31BQ9NQW1 1179 aa4.71□□□□□ -1.66
FNDC3B-209ENST00000478016 C9orf172C9J069 976 aa4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 ESRRAP11474 423 aaPredicted RBP4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 SELPP16109 830 aa4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 CD68P34810 354 aaPredicted RBP4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 NRG1Q02297 640 aaPredicted RBP4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 PCDH1Q08174 1060 aa4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 C19orf57Q0VDD7 668 aa4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 RPS26P11Q5JNZ5 115 aaPredicted RBP4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 IGF2-ASQ6U949 168 aa4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 DTHD1Q6ZMT9 781 aa4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 GALNT11Q8NCW6 608 aa4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 SLC7A3Q8WY07 619 aa4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 LENG1Q96BZ8 264 aaPredicted RBP4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 DUSP9Q99956 384 aaKnown RBP4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 BCL2L13Q9BXK5 485 aa4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 SOX17Q9H6I2 414 aaPredicted RBP4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 MYH16Q9H6N6 1097 aa4.7□□□□□ -1.66
FNDC3B-209ENST00000478016 SOX1O00570 391 aaPredicted RBP4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 B3GALT4O96024 378 aa4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 GSTT1P30711 240 aa4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 FCGRTP55899 365 aa4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 XPCQ01831 940 aaPredicted RBP4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 SUZ12Q15022 739 aaKnown RBP4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 SHISA2Q6UWI4 295 aa4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 NOL8Q76FK4 1167 aaKnown RBP4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 FTSJ3Q8IY81 847 aaKnown RBP4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 DDX54Q8TDD1 881 aaKnown RBP4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 KLHDC7BQ96G42 594 aa4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 SGSM3Q96HU1 749 aa4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 OSBPL7Q9BZF2 842 aa4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 MRPL18Q9H0U6 180 aaKnown RBP4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 C12orf49Q9H741 205 aa4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 FAM8A1Q9UBU6 413 aa4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 PARP2Q9UGN5 583 aa4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 KCNG1Q9UIX4 513 aa4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 USP21Q9UK80 565 aa4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 LAS1LQ9Y4W2 734 aaKnown RBP4.69□□□□□ -1.66
FNDC3B-209ENST00000478016 UNCXA6NJT0 531 aa4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 C1QTNF9BB2RNN3 333 aa4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 TM4SF5O14894 197 aa4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 SMARCA5O60264 1052 aaPredicted RBP4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 EIF4BP23588 611 aaKnown RBP4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 ITGAEP38570 1179 aa4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 CHRNA4P43681 627 aa4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 PSMD2Q13200 908 aa4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 ZNF423Q2M1K9 1284 aa4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 PLA2G4EQ3MJ16 856 aa4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 FOXD4L6Q3SYB3 417 aaPredicted RBP4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 FOXD4L3Q6VB84 417 aaPredicted RBP4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 CD163Q86VB7 1156 aa4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 NME8Q8N427 588 aa4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 AKAP2Q9Y2D5 859 aa4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 SUGT1Q9Y2Z0 365 aa4.68□□□□□ -1.66
FNDC3B-209ENST00000478016 TPD52L2O43399 206 aaKnown RBP4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 USP17L7P0C7H9 530 aa4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 NLRP12P59046 1061 aa4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 DAB2P98082 770 aa4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 GSTM4Q03013 218 aa4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 ADGRE1Q14246 886 aa4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 MBTPS1Q14703 1052 aa4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 DUOXA2Q1HG44 320 aa4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 HGSNATQ68CP4 663 aa4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 TMC4Q7Z404 712 aa4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 TMEM130Q8N3G9 435 aa4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 C3orf58Q8NDZ4 430 aa4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 GIPC2Q8TF65 315 aa4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 KCNK4Q9NYG8 393 aa4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 PPM1HQ9ULR3 514 aa4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 AK5Q9Y6K8 562 aa4.67□□□□□ -1.66
FNDC3B-209ENST00000478016 DDX3YO15523 660 aaKnown RBP4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 MARCH6O60337 910 aa4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 ADAM11O75078 769 aa4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 ITGB2P05107 769 aa4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 CYP11A1P05108 521 aa4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 TAGLNQ01995 201 aaKnown RBP4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 PPP2R3AQ06190 1150 aa4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 FAAP100Q0VG06 881 aa4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 GORABQ5T7V8 394 aa4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 GPAT2Q6NUI2 795 aa4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 ACAD11Q709F0 780 aa4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 TXNRD3Q86VQ6 643 aa4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 CEP44Q9C0F1 390 aa4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 UBA5Q9GZZ9 404 aa4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 MRS2Q9HD23 443 aa4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 RNF19AQ9NV58 838 aa4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 TMEM39AQ9NV64 488 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms