RNA–Protein interactions for RNA: ENST00000477876.1

NUP58-210, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-210ENST00000477876 MICALL1Q8N3F8 863 aa8.55□□□□□ -1.04
NUP58-210ENST00000477876 LRRC59Q96AG4 307 aaKnown RBP8.55□□□□□ -1.04
NUP58-210ENST00000477876 C1orf167Q5SNV9 1468 aa8.55□□□□□ -1.04
NUP58-210ENST00000477876 TMEM88BA6NKF7 163 aa8.54□□□□□ -1.04
NUP58-210ENST00000477876 M0R082 166 aa8.54□□□□□ -1.04
NUP58-210ENST00000477876 SASH3O75995 380 aa8.54□□□□□ -1.04
NUP58-210ENST00000477876 MAP3K6O95382 1288 aa8.54□□□□□ -1.04
NUP58-210ENST00000477876 RGL4Q8IZJ4 473 aa8.54□□□□□ -1.04
NUP58-210ENST00000477876 CMTR1Q8N1G2 835 aaKnown RBP8.54□□□□□ -1.04
NUP58-210ENST00000477876 ZNF417Q8TAU3 575 aa8.54□□□□□ -1.04
NUP58-210ENST00000477876 C8orf37Q96NL8 207 aa8.54□□□□□ -1.04
NUP58-210ENST00000477876 ZNF587Q96SQ5 575 aaPredicted RBP8.54□□□□□ -1.04
NUP58-210ENST00000477876 PLVAPQ9BX97 442 aa8.54□□□□□ -1.04
NUP58-210ENST00000477876 PRDM6Q9NQX0 595 aa8.54□□□□□ -1.04
NUP58-210ENST00000477876 DNAJB12Q9NXW2 375 aaKnown RBP8.54□□□□□ -1.04
NUP58-210ENST00000477876 USP20Q9Y2K6 914 aa8.54□□□□□ -1.04
NUP58-210ENST00000477876 TNFRSF10BO14763 440 aa8.53□□□□□ -1.04
NUP58-210ENST00000477876 EGFRP00533 1210 aa8.53□□□□□ -1.04
NUP58-210ENST00000477876 TARSP26639 723 aaKnown RBP8.53□□□□□ -1.04
NUP58-210ENST00000477876 PLA2G4EQ3MJ16 856 aa8.53□□□□□ -1.04
NUP58-210ENST00000477876 GPAT2Q6NUI2 795 aa8.53□□□□□ -1.04
NUP58-210ENST00000477876 C20orf204Q6ZNR8 217 aa8.53□□□□□ -1.04
NUP58-210ENST00000477876 KRT25Q7Z3Z0 450 aa8.53□□□□□ -1.04
NUP58-210ENST00000477876 ZFATQ9P243 1243 aa8.53□□□□□ -1.04
NUP58-210ENST00000477876 STIM2Q9P246 746 aa8.53□□□□□ -1.04
NUP58-210ENST00000477876 SLC6A14Q9UN76 642 aa8.53□□□□□ -1.04
NUP58-210ENST00000477876 RGS12O14924 1447 aa8.53□□□□□ -1.04
NUP58-210ENST00000477876 ADGRF5Q8IZF2 1346 aa8.53□□□□□ -1.04
NUP58-210ENST00000477876 KRBA1A5PL33 1030 aa8.52□□□□□ -1.05
NUP58-210ENST00000477876 XYLBO75191 536 aa8.52□□□□□ -1.05
NUP58-210ENST00000477876 ALBP02768 609 aa8.52□□□□□ -1.05
NUP58-210ENST00000477876 PCSK7Q16549 785 aa8.52□□□□□ -1.05
NUP58-210ENST00000477876 FAM26DQ5JW98 314 aa8.52□□□□□ -1.05
NUP58-210ENST00000477876 TRIM11Q96F44 468 aa8.52□□□□□ -1.05
NUP58-210ENST00000477876 SEPT3Q9UH03 358 aa8.52□□□□□ -1.05
NUP58-210ENST00000477876 LAMC1P11047 1609 aa8.51□□□□□ -1.05
NUP58-210ENST00000477876 RARAP10276 462 aa8.51□□□□□ -1.05
NUP58-210ENST00000477876 C8orf86Q6ZUL3 223 aa8.51□□□□□ -1.05
NUP58-210ENST00000477876 DHX32Q7L7V1 743 aaKnown RBP8.51□□□□□ -1.05
NUP58-210ENST00000477876 WAPLQ7Z5K2 1190 aa8.51□□□□□ -1.05
NUP58-210ENST00000477876 FAM13BQ9NYF5 915 aa8.51□□□□□ -1.05
NUP58-210ENST00000477876 KCNMB2Q9Y691 235 aa8.51□□□□□ -1.05
NUP58-210ENST00000477876 KIF1BO60333 1816 aa8.51□□□□□ -1.05
NUP58-210ENST00000477876 HFM1A2PYH4 1435 aa8.51□□□□□ -1.05
NUP58-210ENST00000477876 PTCH1Q13635 1447 aa8.51□□□□□ -1.05
NUP58-210ENST00000477876 CDK12Q9NYV4 1490 aaPredicted RBP8.51□□□□□ -1.05
NUP58-210ENST00000477876 SPDYE3A6NKU9 549 aa8.5□□□□□ -1.05
NUP58-210ENST00000477876 SSFA2P28290 1259 aa8.5□□□□□ -1.05
NUP58-210ENST00000477876 RBM6P78332 1123 aaKnown RBP8.5□□□□□ -1.05
NUP58-210ENST00000477876 XPCQ01831 940 aaPredicted RBP8.5□□□□□ -1.05
NUP58-210ENST00000477876 COL9A3Q14050 684 aaPredicted RBP8.5□□□□□ -1.05
NUP58-210ENST00000477876 TMEM132EQ6IEE7 984 aa8.5□□□□□ -1.05
NUP58-210ENST00000477876 PRAG1Q86YV5 1406 aa8.5□□□□□ -1.05
NUP58-210ENST00000477876 TRPM4Q8TD43 1214 aa8.5□□□□□ -1.05
NUP58-210ENST00000477876 PIK3R5Q8WYR1 880 aa8.5□□□□□ -1.05
NUP58-210ENST00000477876 PLEKHH1Q9ULM0 1364 aa8.49□□□□□ -1.05
NUP58-210ENST00000477876 PPLO60437 1756 aa8.49□□□□□ -1.05
NUP58-210ENST00000477876 ZBTB42B2RXF5 422 aa8.49□□□□□ -1.05
NUP58-210ENST00000477876 LILRB5O75023 590 aa8.49□□□□□ -1.05
NUP58-210ENST00000477876 ITGB2P05107 769 aa8.49□□□□□ -1.05
NUP58-210ENST00000477876 ARID4AP29374 1257 aaPredicted RBP8.49□□□□□ -1.05
NUP58-210ENST00000477876 ZAP70P43403 619 aa8.49□□□□□ -1.05
NUP58-210ENST00000477876 RGL3Q3MIN7 710 aa8.49□□□□□ -1.05
NUP58-210ENST00000477876 ABTB2Q8N961 1025 aa8.49□□□□□ -1.05
NUP58-210ENST00000477876 RPGRIP1LQ68CZ1 1315 aa8.49□□□□□ -1.05
NUP58-210ENST00000477876 MSTNO14793 375 aa8.48□□□□□ -1.05
NUP58-210ENST00000477876 ZBTB39O15060 712 aa8.48□□□□□ -1.05
NUP58-210ENST00000477876 PSAPL1Q6NUJ1 521 aa8.48□□□□□ -1.05
NUP58-210ENST00000477876 FAM35AQ86V20 835 aa8.48□□□□□ -1.05
NUP58-210ENST00000477876 TLR7Q9NYK1 1049 aaKnown RBP8.48□□□□□ -1.05
NUP58-210ENST00000477876 STK26Q9P289 416 aa8.48□□□□□ -1.05
NUP58-210ENST00000477876 USP21Q9UK80 565 aa8.48□□□□□ -1.05
NUP58-210ENST00000477876 SPATA31E1Q6ZUB1 1445 aa8.47□□□□□ -1.05
NUP58-210ENST00000477876 BCL9LQ86UU0 1499 aa8.47□□□□□ -1.05
NUP58-210ENST00000477876 PXDNQ92626 1479 aa8.47□□□□□ -1.05
NUP58-210ENST00000477876 NID1P14543 1247 aa8.47□□□□□ -1.05
NUP58-210ENST00000477876 SCNN1AP37088 669 aa8.47□□□□□ -1.05
NUP58-210ENST00000477876 NUDT8Q8WV74 236 aa8.47□□□□□ -1.05
NUP58-210ENST00000477876 MPHOSPH9Q99550 1183 aa8.47□□□□□ -1.05
NUP58-210ENST00000477876 JPH1Q9HDC5 661 aaPredicted RBP8.47□□□□□ -1.05
NUP58-210ENST00000477876 NAGPAQ9UK23 515 aa8.47□□□□□ -1.05
NUP58-210ENST00000477876 MYOM2P54296 1465 aa8.46□□□□□ -1.05
NUP58-210ENST00000477876 RGS9O75916 674 aaPredicted RBP8.46□□□□□ -1.06
NUP58-210ENST00000477876 SPATA31C1P0DKV0 1188 aa8.46□□□□□ -1.06
NUP58-210ENST00000477876 CPB1P15086 417 aa8.46□□□□□ -1.06
NUP58-210ENST00000477876 NRLP54845 237 aa8.46□□□□□ -1.06
NUP58-210ENST00000477876 GPLD1P80108 840 aa8.46□□□□□ -1.06
NUP58-210ENST00000477876 PRRT3Q5FWE3 981 aa8.46□□□□□ -1.06
NUP58-210ENST00000477876 NLRP13Q86W25 1043 aa8.46□□□□□ -1.06
NUP58-210ENST00000477876 ARID3AQ99856 593 aa8.46□□□□□ -1.06
NUP58-210ENST00000477876 SPOCK3Q9BQ16 436 aa8.46□□□□□ -1.06
NUP58-210ENST00000477876 TIMELESSQ9UNS1 1208 aa8.46□□□□□ -1.06
NUP58-210ENST00000477876 FNDC3AQ9Y2H6 1198 aaKnown RBP8.46□□□□□ -1.06
NUP58-210ENST00000477876 ATRNO75882 1429 aa8.46□□□□□ -1.06
NUP58-210ENST00000477876 COL22A1Q8NFW1 1626 aaPredicted RBP8.45□□□□□ -1.06
NUP58-210ENST00000477876 CARNS1A5YM72 827 aa8.45□□□□□ -1.06
NUP58-210ENST00000477876 MMP20O60882 483 aa8.45□□□□□ -1.06
NUP58-210ENST00000477876 PSAPP07602 524 aa8.45□□□□□ -1.06
NUP58-210ENST00000477876 MLLT1Q03111 559 aaPredicted RBP8.45□□□□□ -1.06
NUP58-210ENST00000477876 PLAURQ03405 335 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms