RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 FKBP5Q13451 457 aaPredicted RBP25.81■■□□□ 1.72
PDLIM1-202ENST00000477757 MFSD14BQ5SR56 506 aa25.81■■□□□ 1.72
PDLIM1-202ENST00000477757 SH3TC2Q8TF17 1288 aa25.81■■□□□ 1.72
PDLIM1-202ENST00000477757 ZCCHC17Q9NP64 241 aaKnown RBP25.81■■□□□ 1.72
PDLIM1-202ENST00000477757 TTF2Q9UNY4 1162 aaKnown RBP25.81■■□□□ 1.72
PDLIM1-202ENST00000477757 SPDYE5A6NIY4 337 aa25.8■■□□□ 1.72
PDLIM1-202ENST00000477757 MYCP01106 439 aaPredicted RBP25.8■■□□□ 1.72
PDLIM1-202ENST00000477757 LACTBP83111 547 aaPredicted RBP25.8■■□□□ 1.72
PDLIM1-202ENST00000477757 TMEM39BQ9GZU3 492 aa25.8■■□□□ 1.72
PDLIM1-202ENST00000477757 TLR2O60603 784 aa25.79■■□□□ 1.72
PDLIM1-202ENST00000477757 WDHD1O75717 1129 aaPredicted RBP25.79■■□□□ 1.72
PDLIM1-202ENST00000477757 DZIP1LQ8IYY4 767 aaKnown RBP25.79■■□□□ 1.72
PDLIM1-202ENST00000477757 ARHGAP39Q9C0H5 1083 aa25.79■■□□□ 1.72
PDLIM1-202ENST00000477757 TCP10L2B9ZVM9 353 aa25.78■■□□□ 1.72
PDLIM1-202ENST00000477757 GNRH1P01148 92 aa25.78■■□□□ 1.72
PDLIM1-202ENST00000477757 KIF22Q14807 665 aa25.78■■□□□ 1.72
PDLIM1-202ENST00000477757 TDRD7Q8NHU6 1098 aaKnown RBP25.78■■□□□ 1.72
PDLIM1-202ENST00000477757 CHMP3Q9Y3E7 222 aa25.78■■□□□ 1.72
PDLIM1-202ENST00000477757 TNNI2P48788 182 aa25.77■■□□□ 1.72
PDLIM1-202ENST00000477757 CHRDL2Q6WN34 429 aa25.77■■□□□ 1.72
PDLIM1-202ENST00000477757 SHISA4Q96DD7 197 aa25.77■■□□□ 1.72
PDLIM1-202ENST00000477757 PRKRIP1Q9H875 184 aaPredicted RBP25.77■■□□□ 1.72
PDLIM1-202ENST00000477757 CETPP11597 493 aa25.76■■□□□ 1.71
PDLIM1-202ENST00000477757 CRKP46108 304 aa25.76■■□□□ 1.71
PDLIM1-202ENST00000477757 PRMT2P55345 433 aa25.76■■□□□ 1.71
PDLIM1-202ENST00000477757 LDHAL6AQ6ZMR3 332 aa25.76■■□□□ 1.71
PDLIM1-202ENST00000477757 SNCAIPQ9Y6H5 919 aa25.76■■□□□ 1.71
PDLIM1-202ENST00000477757 CACNA1FO60840 1977 aa25.75■■□□□ 1.71
PDLIM1-202ENST00000477757 BTBD19C9JJ37 291 aa25.74■■□□□ 1.71
PDLIM1-202ENST00000477757 PLIN1O60240 522 aa25.74■■□□□ 1.71
PDLIM1-202ENST00000477757 CCDC57Q2TAC2 916 aa25.74■■□□□ 1.71
PDLIM1-202ENST00000477757 LMBR1LQ6UX01 489 aa25.74■■□□□ 1.71
PDLIM1-202ENST00000477757 ERO1BQ86YB8 467 aa25.74■■□□□ 1.71
PDLIM1-202ENST00000477757 ZNF594Q96JF6 807 aaPredicted RBP25.74■■□□□ 1.71
PDLIM1-202ENST00000477757 CNNM1Q9NRU3 951 aa25.74■■□□□ 1.71
PDLIM1-202ENST00000477757 HIBADHP31937 336 aaKnown RBP25.73■■□□□ 1.71
PDLIM1-202ENST00000477757 GYG1P46976 350 aa25.73■■□□□ 1.71
PDLIM1-202ENST00000477757 UBE4AQ14139 1066 aa25.73■■□□□ 1.71
PDLIM1-202ENST00000477757 CCDC27Q2M243 656 aa25.73■■□□□ 1.71
PDLIM1-202ENST00000477757 TAF7LQ5H9L4 462 aa25.73■■□□□ 1.71
PDLIM1-202ENST00000477757 SNAPC2Q13487 334 aa25.72■■□□□ 1.71
PDLIM1-202ENST00000477757 EPHA10Q5JZY3 1008 aa25.72■■□□□ 1.71
PDLIM1-202ENST00000477757 RBM27Q9P2N5 1060 aaKnown RBP25.72■■□□□ 1.71
PDLIM1-202ENST00000477757 IRF6O14896 467 aa25.71■■□□□ 1.71
PDLIM1-202ENST00000477757 PPIL2Q13356 520 aa25.71■■□□□ 1.71
PDLIM1-202ENST00000477757 FAM84BQ96KN1 310 aaPredicted RBP25.71■■□□□ 1.71
PDLIM1-202ENST00000477757 WRNIP1Q96S55 665 aa25.71■■□□□ 1.71
PDLIM1-202ENST00000477757 IL16Q14005 1332 aa25.7■■□□□ 1.71
PDLIM1-202ENST00000477757 MTFR1Q15390 333 aa25.7■■□□□ 1.7
PDLIM1-202ENST00000477757 BEND3Q5T5X7 828 aa25.7■■□□□ 1.7
PDLIM1-202ENST00000477757 WWC1Q8IX03 1113 aa25.7■■□□□ 1.7
PDLIM1-202ENST00000477757 HDLBPQ00341 1268 aaKnown RBP25.69■■□□□ 1.7
PDLIM1-202ENST00000477757 UBE2Q1Q7Z7E8 422 aa25.69■■□□□ 1.7
PDLIM1-202ENST00000477757 NKX2-3Q8TAU0 364 aa25.69■■□□□ 1.7
PDLIM1-202ENST00000477757 SRRDQ9UH36 339 aa25.69■■□□□ 1.7
PDLIM1-202ENST00000477757 RPAP1Q9BWH6 1393 aaPredicted RBP25.69■■□□□ 1.7
PDLIM1-202ENST00000477757 CACNB3P54284 484 aa25.68■■□□□ 1.7
PDLIM1-202ENST00000477757 GRIK5Q16478 980 aa25.68■■□□□ 1.7
PDLIM1-202ENST00000477757 C17orf99Q6UX52 265 aa25.68■■□□□ 1.7
PDLIM1-202ENST00000477757 DPF3Q92784 378 aa25.68■■□□□ 1.7
PDLIM1-202ENST00000477757 ZKSCAN4Q969J2 545 aaPredicted RBP25.68■■□□□ 1.7
PDLIM1-202ENST00000477757 HOOK2Q96ED9 719 aa25.68■■□□□ 1.7
PDLIM1-202ENST00000477757 TRIM47Q96LD4 638 aa25.68■■□□□ 1.7
PDLIM1-202ENST00000477757 PRO3102Q9H379 93 aa25.68■■□□□ 1.7
PDLIM1-202ENST00000477757 F6X3S4 739 aa25.67■■□□□ 1.7
PDLIM1-202ENST00000477757 GRM8O00222 908 aa25.67■■□□□ 1.7
PDLIM1-202ENST00000477757 CTGFP29279 349 aa25.67■■□□□ 1.7
PDLIM1-202ENST00000477757 FAM83AQ86UY5 434 aa25.67■■□□□ 1.7
PDLIM1-202ENST00000477757 ADGRA2Q96PE1 1338 aa25.66■■□□□ 1.7
PDLIM1-202ENST00000477757 FANCIQ9NVI1 1328 aa25.66■■□□□ 1.7
PDLIM1-202ENST00000477757 PSMC4P43686 418 aa25.66■■□□□ 1.7
PDLIM1-202ENST00000477757 GJA8P48165 433 aa25.66■■□□□ 1.7
PDLIM1-202ENST00000477757 TEKT1Q969V4 418 aa25.66■■□□□ 1.7
PDLIM1-202ENST00000477757 OSBPP22059 807 aa25.65■■□□□ 1.7
PDLIM1-202ENST00000477757 GRK4P32298 578 aa25.65■■□□□ 1.7
PDLIM1-202ENST00000477757 FKBP1CQ5VVH2 108 aa25.65■■□□□ 1.7
PDLIM1-202ENST00000477757 TBC1D22AQ8WUA7 517 aa25.65■■□□□ 1.7
PDLIM1-202ENST00000477757 HTATIP2Q9BUP3 242 aa25.65■■□□□ 1.7
PDLIM1-202ENST00000477757 TMOD2Q9NZR1 351 aa25.65■■□□□ 1.7
PDLIM1-202ENST00000477757 CPA4Q9UI42 421 aa25.65■■□□□ 1.7
PDLIM1-202ENST00000477757 RIPOR2Q9Y4F9 1068 aa25.65■■□□□ 1.7
PDLIM1-202ENST00000477757 GJB1P08034 283 aa25.64■■□□□ 1.7
PDLIM1-202ENST00000477757 HOXD10P28358 340 aa25.64■■□□□ 1.7
PDLIM1-202ENST00000477757 PPATQ06203 517 aa25.64■■□□□ 1.7
PDLIM1-202ENST00000477757 DCAF15Q66K64 600 aa25.64■■□□□ 1.7
PDLIM1-202ENST00000477757 ANKRD23Q86SG2 305 aa25.64■■□□□ 1.7
PDLIM1-202ENST00000477757 ZDHHC15Q96MV8 337 aa25.64■■□□□ 1.7
PDLIM1-202ENST00000477757 FBXO33Q7Z6M2 555 aa25.63■■□□□ 1.69
PDLIM1-202ENST00000477757 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.63■■□□□ 1.69
PDLIM1-202ENST00000477757 RAET1EQ8TD07 263 aa25.63■■□□□ 1.69
PDLIM1-202ENST00000477757 IQSEC3Q9UPP2 1182 aaPredicted RBP25.63■■□□□ 1.69
PDLIM1-202ENST00000477757 COL6A3P12111 3177 aa25.63■■□□□ 1.69
PDLIM1-202ENST00000477757 MROH5Q6ZUA9 1318 aa25.63■■□□□ 1.69
PDLIM1-202ENST00000477757 LAMA3Q16787 3333 aa25.62■■□□□ 1.69
PDLIM1-202ENST00000477757 VAMP4O75379 141 aa25.62■■□□□ 1.69
PDLIM1-202ENST00000477757 ECM2O94769 699 aaPredicted RBP25.62■■□□□ 1.69
PDLIM1-202ENST00000477757 CCL5P13501 91 aa25.62■■□□□ 1.69
PDLIM1-202ENST00000477757 CHAF1AQ13111 956 aaPredicted RBP25.62■■□□□ 1.69
PDLIM1-202ENST00000477757 VPS37DQ86XT2 251 aa25.62■■□□□ 1.69
PDLIM1-202ENST00000477757 PUS3Q9BZE2 481 aaKnown RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms