RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 SLKQ9H2G2 1235 aaPredicted RBP14.52□□□□□ -0.09
PRPF39-203ENST00000477626 LIMCH1Q9UPQ0 1083 aa14.52□□□□□ -0.09
PRPF39-203ENST00000477626 CTDNEP1O95476 244 aa14.51□□□□□ -0.09
PRPF39-203ENST00000477626 KCNA3P22001 575 aa14.51□□□□□ -0.09
PRPF39-203ENST00000477626 EN1Q05925 392 aaPredicted RBP14.51□□□□□ -0.09
PRPF39-203ENST00000477626 SP8Q8IXZ3 490 aa14.51□□□□□ -0.09
PRPF39-203ENST00000477626 ATP6V0A2Q9Y487 856 aa14.51□□□□□ -0.09
PRPF39-203ENST00000477626 MYH6P13533 1939 aa14.51□□□□□ -0.09
PRPF39-203ENST00000477626 BBOX1O75936 387 aa14.51□□□□□ -0.09
PRPF39-203ENST00000477626 LCORLQ8N3X6 602 aa14.51□□□□□ -0.09
PRPF39-203ENST00000477626 FAM205AQ6ZU69 1335 aa14.5□□□□□ -0.09
PRPF39-203ENST00000477626 DICER1Q9UPY3 1922 aaKnown RBP14.5□□□□□ -0.09
PRPF39-203ENST00000477626 SMARCC2Q8TAQ2 1214 aa14.5□□□□□ -0.09
PRPF39-203ENST00000477626 TBC1D16Q8TBP0 767 aa14.5□□□□□ -0.09
PRPF39-203ENST00000477626 HPS5Q9UPZ3 1129 aa14.5□□□□□ -0.09
PRPF39-203ENST00000477626 KIAA1211Q6ZU35 1233 aa14.5□□□□□ -0.09
PRPF39-203ENST00000477626 TMC4Q7Z404 712 aa14.5□□□□□ -0.09
PRPF39-203ENST00000477626 ST5P78524 1137 aa14.49□□□□□ -0.09
PRPF39-203ENST00000477626 PDRG1Q9NUG6 133 aa14.49□□□□□ -0.09
PRPF39-203ENST00000477626 KRT32Q14532 448 aa14.49□□□□□ -0.09
PRPF39-203ENST00000477626 PAPPA2Q9BXP8 1791 aa14.49□□□□□ -0.09
PRPF39-203ENST00000477626 PATL2C9JE40 543 aaKnown RBP14.49□□□□□ -0.09
PRPF39-203ENST00000477626 ZSCAN25Q6NSZ9 544 aa14.49□□□□□ -0.09
PRPF39-203ENST00000477626 MAGEB6Q8N7X4 407 aa14.49□□□□□ -0.09
PRPF39-203ENST00000477626 RBM17Q96I25 401 aaKnown RBP14.49□□□□□ -0.09
PRPF39-203ENST00000477626 CYP46A1Q9Y6A2 500 aa14.49□□□□□ -0.09
PRPF39-203ENST00000477626 DEFB132Q7Z7B7 95 aa14.48□□□□□ -0.09
PRPF39-203ENST00000477626 NEK1Q96PY6 1258 aa14.48□□□□□ -0.09
PRPF39-203ENST00000477626 SGIP1Q9BQI5 828 aa14.48□□□□□ -0.09
PRPF39-203ENST00000477626 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.48□□□□□ -0.09
PRPF39-203ENST00000477626 TFCP2L1Q9NZI6 479 aa14.48□□□□□ -0.09
PRPF39-203ENST00000477626 NEDD4P46934 1319 aa14.48□□□□□ -0.09
PRPF39-203ENST00000477626 STYK1Q6J9G0 422 aa14.48□□□□□ -0.09
PRPF39-203ENST00000477626 GAKO14976 1311 aa14.47□□□□□ -0.09
PRPF39-203ENST00000477626 SMIM22K7EJ46 135 aa14.47□□□□□ -0.09
PRPF39-203ENST00000477626 MMP10P09238 476 aa14.47□□□□□ -0.09
PRPF39-203ENST00000477626 MECOMQ03112 1051 aa14.47□□□□□ -0.09
PRPF39-203ENST00000477626 GTF3C6Q969F1 213 aa14.47□□□□□ -0.09
PRPF39-203ENST00000477626 NPR1P16066 1061 aa14.47□□□□□ -0.09
PRPF39-203ENST00000477626 DHX32Q7L7V1 743 aaKnown RBP14.47□□□□□ -0.09
PRPF39-203ENST00000477626 STAG1Q8WVM7 1258 aa14.47□□□□□ -0.09
PRPF39-203ENST00000477626 SH2B1Q9NRF2 756 aaPredicted RBP14.47□□□□□ -0.09
PRPF39-203ENST00000477626 PFKFB2O60825 505 aa14.46□□□□□ -0.09
PRPF39-203ENST00000477626 PSMA5P28066 241 aa14.46□□□□□ -0.09
PRPF39-203ENST00000477626 HIBADHP31937 336 aaKnown RBP14.46□□□□□ -0.09
PRPF39-203ENST00000477626 MCM4P33991 863 aa14.46□□□□□ -0.09
PRPF39-203ENST00000477626 CYB5R4Q7L1T6 521 aa14.46□□□□□ -0.09
PRPF39-203ENST00000477626 PRKAB2O43741 272 aa14.46□□□□□ -0.09
PRPF39-203ENST00000477626 LRRFIP1Q32MZ4 808 aaKnown RBP14.46□□□□□ -0.09
PRPF39-203ENST00000477626 RNF20Q5VTR2 975 aa14.46□□□□□ -0.09
PRPF39-203ENST00000477626 IFNL3Q8IZI9 196 aa14.46□□□□□ -0.09
PRPF39-203ENST00000477626 IGDCC4Q8TDY8 1250 aa14.46□□□□□ -0.09
PRPF39-203ENST00000477626 FAM163AQ96GL9 167 aaPredicted RBP14.46□□□□□ -0.09
PRPF39-203ENST00000477626 ATP2B4P23634 1241 aa14.46□□□□□ -0.1
PRPF39-203ENST00000477626 EVX2Q03828 476 aa14.46□□□□□ -0.1
PRPF39-203ENST00000477626 SPRYD3Q8NCJ5 442 aa14.46□□□□□ -0.1
PRPF39-203ENST00000477626 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.46□□□□□ -0.1
PRPF39-203ENST00000477626 GIMAP6Q6P9H5 292 aa14.45□□□□□ -0.1
PRPF39-203ENST00000477626 PPEF1O14829 653 aaPredicted RBP14.45□□□□□ -0.1
PRPF39-203ENST00000477626 SBF1O95248 1867 aa14.45□□□□□ -0.1
PRPF39-203ENST00000477626 HMGB1P09429 215 aaKnown RBP14.45□□□□□ -0.1
PRPF39-203ENST00000477626 ZKSCAN1P17029 563 aaPredicted RBP14.45□□□□□ -0.1
PRPF39-203ENST00000477626 PRDX5P30044 214 aa14.45□□□□□ -0.1
PRPF39-203ENST00000477626 PPP4CP60510 307 aa14.45□□□□□ -0.1
PRPF39-203ENST00000477626 OLFM4Q6UX06 510 aa14.45□□□□□ -0.1
PRPF39-203ENST00000477626 RGS22Q8NE09 1264 aa14.45□□□□□ -0.1
PRPF39-203ENST00000477626 ZSCAN31Q96LW9 406 aaPredicted RBP14.45□□□□□ -0.1
PRPF39-203ENST00000477626 MBD4O95243 580 aa14.45□□□□□ -0.1
PRPF39-203ENST00000477626 SCRN1Q12765 414 aa14.45□□□□□ -0.1
PRPF39-203ENST00000477626 GORABQ5T7V8 394 aa14.45□□□□□ -0.1
PRPF39-203ENST00000477626 GPR101Q96P66 508 aaPredicted RBP14.45□□□□□ -0.1
PRPF39-203ENST00000477626 CD209Q9NNX6 404 aa14.45□□□□□ -0.1
PRPF39-203ENST00000477626 BRPF3Q9ULD4 1205 aa14.45□□□□□ -0.1
PRPF39-203ENST00000477626 MAP3K12Q12852 859 aa14.44□□□□□ -0.1
PRPF39-203ENST00000477626 BLOC1S2Q6QNY1 142 aa14.44□□□□□ -0.1
PRPF39-203ENST00000477626 TMEM87AQ8NBN3 555 aa14.44□□□□□ -0.1
PRPF39-203ENST00000477626 ARMT1Q9H993 441 aa14.44□□□□□ -0.1
PRPF39-203ENST00000477626 Q6ZUG5 572 aa14.44□□□□□ -0.1
PRPF39-203ENST00000477626 FAM217BQ9NTX9 383 aaPredicted RBP14.44□□□□□ -0.1
PRPF39-203ENST00000477626 NOVP48745 357 aa14.44□□□□□ -0.1
PRPF39-203ENST00000477626 ZNF274Q96GC6 653 aaPredicted RBP14.44□□□□□ -0.1
PRPF39-203ENST00000477626 MASTLQ96GX5 879 aa14.44□□□□□ -0.1
PRPF39-203ENST00000477626 TCEANC2Q96MN5 208 aa14.43□□□□□ -0.1
PRPF39-203ENST00000477626 LARP6Q9BRS8 491 aaKnown RBP14.43□□□□□ -0.1
PRPF39-203ENST00000477626 GPHNQ9NQX3 736 aaPredicted RBP14.43□□□□□ -0.1
PRPF39-203ENST00000477626 IDH1O75874 414 aaKnown RBP14.43□□□□□ -0.1
PRPF39-203ENST00000477626 GNAT2P19087 354 aa14.43□□□□□ -0.1
PRPF39-203ENST00000477626 CAVIN4Q5BKX8 364 aa14.43□□□□□ -0.1
PRPF39-203ENST00000477626 SGMS1Q86VZ5 419 aa14.43□□□□□ -0.1
PRPF39-203ENST00000477626 CERS5Q8N5B7 392 aa14.43□□□□□ -0.1
PRPF39-203ENST00000477626 MTA3Q9BTC8 594 aa14.43□□□□□ -0.1
PRPF39-203ENST00000477626 SENP2Q9HC62 589 aa14.43□□□□□ -0.1
PRPF39-203ENST00000477626 SH2B2O14492 632 aaPredicted RBP14.42□□□□□ -0.1
PRPF39-203ENST00000477626 BAG4O95429 457 aaKnown RBP14.42□□□□□ -0.1
PRPF39-203ENST00000477626 MTMR6Q9Y217 621 aa14.42□□□□□ -0.1
PRPF39-203ENST00000477626 FDPSP14324 419 aaKnown RBP14.42□□□□□ -0.1
PRPF39-203ENST00000477626 PDIA3P30101 505 aaKnown RBP14.42□□□□□ -0.1
PRPF39-203ENST00000477626 RHBDL3P58872 404 aa14.42□□□□□ -0.1
PRPF39-203ENST00000477626 ANKRD1Q15327 319 aa14.42□□□□□ -0.1
PRPF39-203ENST00000477626 SEC23AQ15436 765 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms