RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 SF3A1Q15459 793 aaKnown RBP21.05■□□□□ 0.96
CCM2-209ENST00000477605 ZBTB38Q8NAP3 1195 aaPredicted RBP21.05■□□□□ 0.96
CCM2-209ENST00000477605 TSC1Q92574 1164 aa21.05■□□□□ 0.96
CCM2-209ENST00000477605 ORC3Q9UBD5 711 aaPredicted RBP21.05■□□□□ 0.96
CCM2-209ENST00000477605 HPS5Q9UPZ3 1129 aa21.05■□□□□ 0.96
CCM2-209ENST00000477605 TPD52L1Q16890 204 aaPredicted RBP21.05■□□□□ 0.96
CCM2-209ENST00000477605 TAF7LQ5H9L4 462 aa21.05■□□□□ 0.96
CCM2-209ENST00000477605 CDHR2Q9BYE9 1310 aa21.04■□□□□ 0.96
CCM2-209ENST00000477605 GOLGA8BA8MQT2 603 aa21.04■□□□□ 0.96
CCM2-209ENST00000477605 CPLX1O14810 134 aa21.04■□□□□ 0.96
CCM2-209ENST00000477605 SPTLC2O15270 562 aa21.04■□□□□ 0.96
CCM2-209ENST00000477605 ADORA1P30542 326 aa21.04■□□□□ 0.96
CCM2-209ENST00000477605 MYSM1Q5VVJ2 828 aa21.04■□□□□ 0.96
CCM2-209ENST00000477605 KIF6Q6ZMV9 814 aa21.04■□□□□ 0.96
CCM2-209ENST00000477605 PDCL2Q8N4E4 241 aa21.04■□□□□ 0.96
CCM2-209ENST00000477605 KIAA1468Q9P260 1216 aa21.04■□□□□ 0.96
CCM2-209ENST00000477605 PLCH1Q4KWH8 1693 aa21.03■□□□□ 0.96
CCM2-209ENST00000477605 TTF1Q15361 905 aaPredicted RBP21.03■□□□□ 0.96
CCM2-209ENST00000477605 ZRSR1Q15695 479 aaKnown RBP21.03■□□□□ 0.96
CCM2-209ENST00000477605 SYNE3Q6ZMZ3 975 aa21.03■□□□□ 0.96
CCM2-209ENST00000477605 COL5A2P05997 1499 aaPredicted RBP21.03■□□□□ 0.96
CCM2-209ENST00000477605 ZAP70P43403 619 aa21.03■□□□□ 0.96
CCM2-209ENST00000477605 C16orf45Q96MC5 204 aaPredicted RBP21.03■□□□□ 0.96
CCM2-209ENST00000477605 ANTXR2P58335 489 aa21.02■□□□□ 0.96
CCM2-209ENST00000477605 GJD4Q96KN9 370 aaPredicted RBP21.02■□□□□ 0.96
CCM2-209ENST00000477605 OSBPL5Q9H0X9 879 aaPredicted RBP21.02■□□□□ 0.96
CCM2-209ENST00000477605 GPAA1O43292 621 aa21.01■□□□□ 0.95
CCM2-209ENST00000477605 CDKL5O76039 1030 aa21.01■□□□□ 0.95
CCM2-209ENST00000477605 CMA1P23946 247 aa21.01■□□□□ 0.95
CCM2-209ENST00000477605 NDUFA8P51970 172 aa21.01■□□□□ 0.95
CCM2-209ENST00000477605 TRDNQ13061 729 aa21.01■□□□□ 0.95
CCM2-209ENST00000477605 ATP2B3Q16720 1220 aa21.01■□□□□ 0.95
CCM2-209ENST00000477605 CCDC112Q8NEF3 446 aa21.01■□□□□ 0.95
CCM2-209ENST00000477605 TIGD1Q96MW7 591 aa21.01■□□□□ 0.95
CCM2-209ENST00000477605 PUS7LQ9H0K6 701 aaKnown RBP21.01■□□□□ 0.95
CCM2-209ENST00000477605 RIPOR2Q9Y4F9 1068 aa21.01■□□□□ 0.95
CCM2-209ENST00000477605 CLIC4Q9Y696 253 aa21.01■□□□□ 0.95
CCM2-209ENST00000477605 NWD2Q9ULI1 1742 aa21.01■□□□□ 0.95
CCM2-209ENST00000477605 SKILP12757 684 aa21.01■□□□□ 0.95
CCM2-209ENST00000477605 HAND2P61296 217 aa21.01■□□□□ 0.95
CCM2-209ENST00000477605 TPM4P67936 248 aa21.01■□□□□ 0.95
CCM2-209ENST00000477605 AOPEPQ8N6M6 819 aa21.01■□□□□ 0.95
CCM2-209ENST00000477605 GPHNQ9NQX3 736 aaPredicted RBP21.01■□□□□ 0.95
CCM2-209ENST00000477605 A0A1B0GVL5 298 aa21■□□□□ 0.95
CCM2-209ENST00000477605 KIF2AO00139 706 aaPredicted RBP21■□□□□ 0.95
CCM2-209ENST00000477605 KIF23Q02241 960 aaPredicted RBP21■□□□□ 0.95
CCM2-209ENST00000477605 SCARF1Q14162 830 aa21■□□□□ 0.95
CCM2-209ENST00000477605 HSP90AB3PQ58FF7 597 aa21■□□□□ 0.95
CCM2-209ENST00000477605 ANO1Q5XXA6 986 aa21■□□□□ 0.95
CCM2-209ENST00000477605 CEP135Q66GS9 1140 aa21■□□□□ 0.95
CCM2-209ENST00000477605 CCDC69A6NI79 296 aa21■□□□□ 0.95
CCM2-209ENST00000477605 ZMYM6O95789 1325 aa21■□□□□ 0.95
CCM2-209ENST00000477605 ADD2P35612 726 aa21■□□□□ 0.95
CCM2-209ENST00000477605 UBE3CQ15386 1083 aa21■□□□□ 0.95
CCM2-209ENST00000477605 PPP4R3BQ5MIZ7 849 aa21■□□□□ 0.95
CCM2-209ENST00000477605 TMOD3Q9NYL9 352 aa21■□□□□ 0.95
CCM2-209ENST00000477605 SLC3A2P08195 630 aaKnown RBP20.99■□□□□ 0.95
CCM2-209ENST00000477605 NLRP12P59046 1061 aa20.99■□□□□ 0.95
CCM2-209ENST00000477605 CPLX2Q6PUV4 134 aaKnown RBP20.99■□□□□ 0.95
CCM2-209ENST00000477605 GIGYF2Q6Y7W6 1299 aaKnown RBP20.99■□□□□ 0.95
CCM2-209ENST00000477605 NYAP1Q6ZVC0 841 aa20.99■□□□□ 0.95
CCM2-209ENST00000477605 ANGEL1Q9UNK9 670 aaKnown RBP20.99■□□□□ 0.95
CCM2-209ENST00000477605 STARD3NLO95772 234 aa20.98■□□□□ 0.95
CCM2-209ENST00000477605 CCZ1BP86790 482 aa20.98■□□□□ 0.95
CCM2-209ENST00000477605 CCZ1P86791 482 aaPredicted RBP20.98■□□□□ 0.95
CCM2-209ENST00000477605 SLC39A14Q15043 492 aa20.98■□□□□ 0.95
CCM2-209ENST00000477605 METTL24Q5JXM2 366 aa20.98■□□□□ 0.95
CCM2-209ENST00000477605 FEZ1Q99689 392 aa20.98■□□□□ 0.95
CCM2-209ENST00000477605 COL14A1Q05707 1796 aaKnown RBP20.98■□□□□ 0.95
CCM2-209ENST00000477605 MAP3K15Q6ZN16 1313 aa20.98■□□□□ 0.95
CCM2-209ENST00000477605 ZNF202O95125 648 aa20.98■□□□□ 0.95
CCM2-209ENST00000477605 POLR3DP05423 398 aaPredicted RBP20.98■□□□□ 0.95
CCM2-209ENST00000477605 KCNJ6P48051 423 aa20.98■□□□□ 0.95
CCM2-209ENST00000477605 PTPN14Q15678 1187 aa20.98■□□□□ 0.95
CCM2-209ENST00000477605 VPS72Q15906 364 aa20.98■□□□□ 0.95
CCM2-209ENST00000477605 AXDND1Q5T1B0 1012 aaPredicted RBP20.98■□□□□ 0.95
CCM2-209ENST00000477605 JMYQ8N9B5 988 aa20.98■□□□□ 0.95
CCM2-209ENST00000477605 FAM89AQ96GI7 184 aa20.98■□□□□ 0.95
CCM2-209ENST00000477605 BTG4Q9NY30 223 aa20.98■□□□□ 0.95
CCM2-209ENST00000477605 RIC1Q4ADV7 1423 aa20.97■□□□□ 0.95
CCM2-209ENST00000477605 OTUD7BQ6GQQ9 843 aa20.97■□□□□ 0.95
CCM2-209ENST00000477605 CCDC150Q8NCX0 1101 aa20.97■□□□□ 0.95
CCM2-209ENST00000477605 TMEM87BQ96K49 555 aa20.97■□□□□ 0.95
CCM2-209ENST00000477605 PPP6R2O75170 966 aa20.97■□□□□ 0.95
CCM2-209ENST00000477605 TUBB4AP04350 444 aa20.97■□□□□ 0.95
CCM2-209ENST00000477605 NCBP1Q09161 790 aaKnown RBP20.97■□□□□ 0.95
CCM2-209ENST00000477605 LDHAL6AQ6ZMR3 332 aa20.97■□□□□ 0.95
CCM2-209ENST00000477605 NEDD4P46934 1319 aa20.96■□□□□ 0.95
CCM2-209ENST00000477605 NRAPQ86VF7 1730 aa20.96■□□□□ 0.95
CCM2-209ENST00000477605 FAM237AA0A1B0GTK4 181 aa20.96■□□□□ 0.95
CCM2-209ENST00000477605 ANKRD18BA2A2Z9 1011 aa20.96■□□□□ 0.95
CCM2-209ENST00000477605 IKBKBO14920 756 aa20.96■□□□□ 0.95
CCM2-209ENST00000477605 MCAMP43121 646 aa20.96■□□□□ 0.95
CCM2-209ENST00000477605 ALX1Q15699 326 aa20.96■□□□□ 0.95
CCM2-209ENST00000477605 FILIP1Q7Z7B0 1213 aa20.96■□□□□ 0.95
CCM2-209ENST00000477605 TTLL11Q8NHH1 800 aa20.96■□□□□ 0.95
CCM2-209ENST00000477605 DDX60Q8IY21 1712 aaKnown RBP20.96■□□□□ 0.95
CCM2-209ENST00000477605 FAM177BA6PVY3 158 aa20.95■□□□□ 0.94
CCM2-209ENST00000477605 SH2B2O14492 632 aaPredicted RBP20.95■□□□□ 0.94
CCM2-209ENST00000477605 PPFIA3O75145 1194 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms