RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ANKRD18AQ8IVF6 992 aa14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 DRAXINQ8NBI3 349 aaPredicted RBP14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 KAT2BQ92831 832 aa14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 SNUPNO95149 360 aaKnown RBP14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 NBPF7P0C2Y1 421 aaPredicted RBP14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 CD151P48509 253 aa14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 PREPLQ4J6C6 727 aaPredicted RBP14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 CWC27Q6UX04 472 aaKnown RBP14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 PPP1R42Q7Z4L9 355 aa14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 TRIM74Q86UV6 250 aa14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 TRIM73Q86UV7 250 aa14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 C16orf71Q8IYS4 520 aaPredicted RBP14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 CACTINQ8WUQ7 758 aaKnown RBP14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 INTS4Q96HW7 963 aaKnown RBP14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 JPH2Q9BR39 696 aaPredicted RBP14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 ARFGAP3Q9NP61 516 aa14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 EFCAB8A8MWE9 144 aa14.56□□□□□ -0.08
RTFDC1-207ENST00000477573 MYL6BP14649 208 aa14.56□□□□□ -0.08
RTFDC1-207ENST00000477573 KCNB2Q92953 911 aa14.56□□□□□ -0.08
RTFDC1-207ENST00000477573 TMX3Q96JJ7 454 aa14.56□□□□□ -0.08
RTFDC1-207ENST00000477573 KDM4CQ9H3R0 1056 aa14.56□□□□□ -0.08
RTFDC1-207ENST00000477573 OSBPL3Q9H4L5 887 aa14.56□□□□□ -0.08
RTFDC1-207ENST00000477573 CHUKO15111 745 aa14.56□□□□□ -0.08
RTFDC1-207ENST00000477573 NPHP1O15259 732 aa14.56□□□□□ -0.08
RTFDC1-207ENST00000477573 SRGAP3O43295 1099 aa14.56□□□□□ -0.08
RTFDC1-207ENST00000477573 ZNF75DP51815 510 aa14.56□□□□□ -0.08
RTFDC1-207ENST00000477573 POLA2Q14181 598 aa14.56□□□□□ -0.08
RTFDC1-207ENST00000477573 CPLX2Q6PUV4 134 aaKnown RBP14.56□□□□□ -0.08
RTFDC1-207ENST00000477573 CCAR2Q8N163 923 aaKnown RBP14.56□□□□□ -0.08
RTFDC1-207ENST00000477573 USP16Q9Y5T5 823 aa14.56□□□□□ -0.08
RTFDC1-207ENST00000477573 LAMB4A4D0S4 1761 aa14.55□□□□□ -0.08
RTFDC1-207ENST00000477573 GSPT1P15170 499 aaKnown RBP14.55□□□□□ -0.08
RTFDC1-207ENST00000477573 ABCD1P33897 745 aa14.55□□□□□ -0.08
RTFDC1-207ENST00000477573 FOXR1Q6PIV2 292 aa14.55□□□□□ -0.08
RTFDC1-207ENST00000477573 ARMCX6Q7L4S7 300 aa14.55□□□□□ -0.08
RTFDC1-207ENST00000477573 LRRC8AQ8IWT6 810 aa14.55□□□□□ -0.08
RTFDC1-207ENST00000477573 XAGE3Q8WTP9 111 aa14.55□□□□□ -0.08
RTFDC1-207ENST00000477573 CABS1Q96KC9 395 aa14.55□□□□□ -0.08
RTFDC1-207ENST00000477573 CHCHD3Q9NX63 227 aaKnown RBP14.55□□□□□ -0.08
RTFDC1-207ENST00000477573 GRM8O00222 908 aa14.54□□□□□ -0.08
RTFDC1-207ENST00000477573 MTX1Q13505 466 aa14.54□□□□□ -0.08
RTFDC1-207ENST00000477573 ANKRD13DQ6ZTN6 518 aa14.54□□□□□ -0.08
RTFDC1-207ENST00000477573 COPS6Q7L5N1 327 aa14.54□□□□□ -0.08
RTFDC1-207ENST00000477573 RPUSD2Q8IZ73 545 aaKnown RBP14.54□□□□□ -0.08
RTFDC1-207ENST00000477573 TMTC2Q8N394 836 aa14.54□□□□□ -0.08
RTFDC1-207ENST00000477573 PRPF38AQ8NAV1 312 aaKnown RBP14.54□□□□□ -0.08
RTFDC1-207ENST00000477573 CHAMP1Q96JM3 812 aa14.54□□□□□ -0.08
RTFDC1-207ENST00000477573 FUT8Q9BYC5 575 aa14.54□□□□□ -0.08
RTFDC1-207ENST00000477573 SHANK3Q9BYB0 1731 aa14.54□□□□□ -0.08
RTFDC1-207ENST00000477573 SURF6O75683 361 aaKnown RBP14.54□□□□□ -0.08
RTFDC1-207ENST00000477573 CCNHP51946 323 aaPredicted RBP14.54□□□□□ -0.08
RTFDC1-207ENST00000477573 PDE1AP54750 535 aa14.54□□□□□ -0.08
RTFDC1-207ENST00000477573 GPR161Q8N6U8 529 aaKnown RBP14.54□□□□□ -0.08
RTFDC1-207ENST00000477573 WDR33Q9C0J8 1336 aaKnown RBP14.54□□□□□ -0.08
RTFDC1-207ENST00000477573 PECAM1P16284 738 aaPredicted RBP14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 CUL4AQ13619 759 aa14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 TBC1D25Q3MII6 688 aa14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 WLSQ5T9L3 541 aa14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 OTUD7AQ8TE49 926 aaPredicted RBP14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 METTL22Q9BUU2 404 aaPredicted RBP14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 TMOD3Q9NYL9 352 aa14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 UTYO14607 1347 aa14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 UBR2Q8IWV8 1755 aa14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 MAP2K7O14733 419 aa14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 TOM1O60784 492 aa14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 CWF19L2Q2TBE0 894 aaKnown RBP14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 THOC1Q96FV9 657 aaKnown RBP14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 ACBD3Q9H3P7 528 aa14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 ODF2LQ9ULJ1 636 aa14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 TBC1D2BQ9UPU7 963 aa14.53□□□□□ -0.08
RTFDC1-207ENST00000477573 USP27XA6NNY8 438 aa14.52□□□□□ -0.08
RTFDC1-207ENST00000477573 SEC31AO94979 1220 aaKnown RBP14.52□□□□□ -0.08
RTFDC1-207ENST00000477573 BICD2Q8TD16 824 aa14.52□□□□□ -0.08
RTFDC1-207ENST00000477573 MICAL1Q8TDZ2 1067 aa14.52□□□□□ -0.08
RTFDC1-207ENST00000477573 CCDC97Q96F63 343 aaPredicted RBP14.52□□□□□ -0.08
RTFDC1-207ENST00000477573 NRBP1Q9UHY1 535 aa14.52□□□□□ -0.08
RTFDC1-207ENST00000477573 PHLPP1O60346 1717 aa14.52□□□□□ -0.09
RTFDC1-207ENST00000477573 PAPPAQ13219 1627 aa14.52□□□□□ -0.09
RTFDC1-207ENST00000477573 PES1O00541 588 aaKnown RBP14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 TADA3O75528 432 aa14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 KCNJ6P48051 423 aa14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 PSMD2Q13200 908 aa14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 SNW1Q13573 536 aaKnown RBP14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 DNAJC14Q6Y2X3 702 aaPredicted RBP14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 TCP11Q8WWU5 503 aa14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 PIK3R5Q8WYR1 880 aa14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 TRIM5Q9C035 493 aa14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 HOMER3Q9NSC5 361 aa14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 FAM163BP0C2L3 166 aa14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 SDSP20132 328 aa14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 LRP10Q7Z4F1 713 aa14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 ARHGEF1Q92888 912 aaKnown RBP14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 CCDC34Q96HJ3 373 aa14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 CRACR2AQ9BSW2 395 aa14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 AOX1Q06278 1338 aa14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 RPAP1Q9BWH6 1393 aaPredicted RBP14.51□□□□□ -0.09
RTFDC1-207ENST00000477573 NEURL1BA8MQ27 555 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 H3BQF6 201 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 IMPDH2P12268 514 aa14.5□□□□□ -0.09
RTFDC1-207ENST00000477573 SKILP12757 684 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms