RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 FTOQ9C0B1 505 aaKnown RBP eCLIP15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 EFCAB8A8MWE9 144 aa15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 ZNF202O95125 648 aa15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 CCT2P78371 535 aaKnown RBP15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 IMMTQ16891 758 aaKnown RBP15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 ANO1Q5XXA6 986 aa15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 UBE3BQ7Z3V4 1068 aa15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 FMNL2Q96PY5 1086 aa15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 MPHOSPH8Q99549 860 aa15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 TMX1Q9H3N1 280 aa15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 MAST3O60307 1309 aa15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 TJP1Q07157 1748 aa15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 MYH7P12883 1935 aa15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 RGPD5Q99666 1765 aa15.64■□□□□ 0.09
HLA-DMA-208ENST00000477541 NWD2Q9ULI1 1742 aa15.64■□□□□ 0.09
HLA-DMA-208ENST00000477541 A0A087WZG4 1122 aa15.64■□□□□ 0.09
HLA-DMA-208ENST00000477541 A0A1B0GVL5 298 aa15.64■□□□□ 0.09
HLA-DMA-208ENST00000477541 H7C1W4 665 aa15.64■□□□□ 0.09
HLA-DMA-208ENST00000477541 FANCCQ00597 558 aa15.64■□□□□ 0.09
HLA-DMA-208ENST00000477541 TEX35Q5T0J7 233 aa15.64■□□□□ 0.09
HLA-DMA-208ENST00000477541 TTC5Q8N0Z6 440 aa15.64■□□□□ 0.09
HLA-DMA-208ENST00000477541 RAPGEF4Q8WZA2 1011 aa15.64■□□□□ 0.09
HLA-DMA-208ENST00000477541 GOLIM4O00461 696 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 CDKL5O76039 1030 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 ADAMTS2O95450 1211 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 MYL6BP14649 208 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 MYL5Q02045 173 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 SLC39A14Q15043 492 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 CCDC158Q5M9N0 1113 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 TMCO3Q6UWJ1 677 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 SYT10Q6XYQ8 523 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 UBXN4Q92575 508 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 GLI3P10071 1580 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 ARHGAP6O43182 974 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 ZRANB2O95218 330 aaKnown RBP eCLIP15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 PHKG2P15735 406 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 TATP17735 454 aaPredicted RBP15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 ESCO1Q5FWF5 840 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 AXDND1Q5T1B0 1012 aaPredicted RBP15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 ATG9AQ7Z3C6 839 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 IFNL2Q8IZJ0 200 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 DCAF5Q96JK2 942 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 TSPYL1Q9H0U9 437 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 NCOA5Q9HCD5 579 aaKnown RBP15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 ZNF446Q9NWS9 450 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 HPSEQ9Y251 543 aa15.63■□□□□ 0.09
HLA-DMA-208ENST00000477541 CPDO75976 1380 aa15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 ALS2Q96Q42 1657 aa15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 IFIT1P09914 478 aaKnown RBP15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 PFKFB1P16118 471 aa15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 CLCN6P51797 869 aa15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 TUBB4BP68371 445 aa15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 FOXO4P98177 505 aa15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 KIF23Q02241 960 aaPredicted RBP15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 HOMER1Q86YM7 354 aa15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 VSTM4Q8IW00 320 aa15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 MNS1Q8NEH6 495 aa15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 NCOA7Q8NI08 942 aa15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 ORC3Q9UBD5 711 aaPredicted RBP15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 HOOK1Q9UJC3 728 aaKnown RBP15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 FHOD1Q9Y613 1164 aa15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 CLIC4Q9Y696 253 aa15.62■□□□□ 0.09
HLA-DMA-208ENST00000477541 EYA2O00167 538 aa15.61■□□□□ 0.09
HLA-DMA-208ENST00000477541 CPLX1O14810 134 aa15.61■□□□□ 0.09
HLA-DMA-208ENST00000477541 PNMA6AP0CW24 399 aaPredicted RBP15.61■□□□□ 0.09
HLA-DMA-208ENST00000477541 CYP2C19P33261 490 aa15.61■□□□□ 0.09
HLA-DMA-208ENST00000477541 ERCC6LQ2NKX8 1250 aa15.61■□□□□ 0.09
HLA-DMA-208ENST00000477541 ARHGAP29Q52LW3 1261 aa15.61■□□□□ 0.09
HLA-DMA-208ENST00000477541 JAKMIP3Q5VZ66 844 aa15.61■□□□□ 0.09
HLA-DMA-208ENST00000477541 LMBR1LQ6UX01 489 aa15.61■□□□□ 0.09
HLA-DMA-208ENST00000477541 OLFM4Q6UX06 510 aa15.61■□□□□ 0.09
HLA-DMA-208ENST00000477541 MB21D2Q8IYB1 491 aaPredicted RBP15.61■□□□□ 0.09
HLA-DMA-208ENST00000477541 V9GYY5 206 aaPredicted RBP15.61■□□□□ 0.09
HLA-DMA-208ENST00000477541 TADA3O75528 432 aa15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 SYKP43405 635 aa15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 CPLX2Q6PUV4 134 aaKnown RBP15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 ZNF496Q96IT1 587 aaPredicted RBP15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 BCL11BQ9C0K0 894 aaPredicted RBP15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 AKAP2Q9Y2D5 859 aa15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 GOLGA8BA8MQT2 603 aa15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 PRC1O43663 620 aa15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 UBASH3AP57075 661 aa15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 SLC20A2Q08357 652 aa15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 CT47A1Q5JQC4 288 aaPredicted RBP15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 TRIM65Q6PJ69 517 aa15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 RALYLQ86SE5 291 aaKnown RBP15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 GPR161Q8N6U8 529 aaKnown RBP15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 CWC25Q9NXE8 425 aaPredicted RBP15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 DACH1Q9UI36 760 aa15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 NAP1L2Q9ULW6 460 aaPredicted RBP15.6■□□□□ 0.09
HLA-DMA-208ENST00000477541 ZMYM6O95789 1325 aa15.59■□□□□ 0.09
HLA-DMA-208ENST00000477541 KLF18A0A0U1RQI7 1052 aa15.59■□□□□ 0.09
HLA-DMA-208ENST00000477541 CUTAO60888 179 aa15.59■□□□□ 0.09
HLA-DMA-208ENST00000477541 FOSBP53539 338 aa15.59■□□□□ 0.09
HLA-DMA-208ENST00000477541 GUCY1B3Q02153 619 aa15.59■□□□□ 0.09
HLA-DMA-208ENST00000477541 NEUROD6Q96NK8 337 aa15.59■□□□□ 0.09
HLA-DMA-208ENST00000477541 HPS5Q9UPZ3 1129 aa15.59■□□□□ 0.09
HLA-DMA-208ENST00000477541 UBR2Q8IWV8 1755 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms