RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 SHISA2Q6UWI4 295 aa5.59□□□□□ -1.51
TARDBP-208ENST00000477447 SULF2Q8IWU5 870 aa5.59□□□□□ -1.51
TARDBP-208ENST00000477447 ANKRD24Q8TF21 1146 aa5.59□□□□□ -1.51
TARDBP-208ENST00000477447 TRIM56Q9BRZ2 755 aaKnown RBP5.59□□□□□ -1.51
TARDBP-208ENST00000477447 BACH2Q9BYV9 841 aa5.59□□□□□ -1.51
TARDBP-208ENST00000477447 TM4SF5O14894 197 aa5.58□□□□□ -1.52
TARDBP-208ENST00000477447 PAGE1O75459 146 aa5.58□□□□□ -1.52
TARDBP-208ENST00000477447 WISP1O95388 367 aa5.58□□□□□ -1.52
TARDBP-208ENST00000477447 APBA3O96018 575 aa5.58□□□□□ -1.52
TARDBP-208ENST00000477447 ST13P50502 369 aaKnown RBP5.58□□□□□ -1.52
TARDBP-208ENST00000477447 AP3B2Q13367 1082 aa5.58□□□□□ -1.52
TARDBP-208ENST00000477447 MAP3K11Q16584 847 aa5.58□□□□□ -1.52
TARDBP-208ENST00000477447 SV2BQ7L1I2 683 aa5.58□□□□□ -1.52
TARDBP-208ENST00000477447 USP21Q9UK80 565 aa5.58□□□□□ -1.52
TARDBP-208ENST00000477447 USP31Q70CQ4 1352 aa5.57□□□□□ -1.52
TARDBP-208ENST00000477447 E9PSI1 815 aa5.57□□□□□ -1.52
TARDBP-208ENST00000477447 EIF4EBP3O60516 100 aaPredicted RBP5.57□□□□□ -1.52
TARDBP-208ENST00000477447 CYP11A1P05108 521 aa5.57□□□□□ -1.52
TARDBP-208ENST00000477447 SELPP16109 830 aa5.57□□□□□ -1.52
TARDBP-208ENST00000477447 NME2P22392 152 aa5.57□□□□□ -1.52
TARDBP-208ENST00000477447 MAOBP27338 520 aa5.57□□□□□ -1.52
TARDBP-208ENST00000477447 POU4F3Q15319 338 aa5.57□□□□□ -1.52
TARDBP-208ENST00000477447 DUOXA2Q1HG44 320 aa5.57□□□□□ -1.52
TARDBP-208ENST00000477447 LDLRAD1Q5T700 205 aa5.57□□□□□ -1.52
TARDBP-208ENST00000477447 PCNX4Q63HM2 1172 aa5.57□□□□□ -1.52
TARDBP-208ENST00000477447 ACAD11Q709F0 780 aa5.57□□□□□ -1.52
TARDBP-208ENST00000477447 ALYREFQ86V81 257 aaKnown RBP5.57□□□□□ -1.52
TARDBP-208ENST00000477447 NACC1Q96RE7 527 aa5.57□□□□□ -1.52
TARDBP-208ENST00000477447 CORO1BQ9BR76 489 aa5.57□□□□□ -1.52
TARDBP-208ENST00000477447 NRSN2Q9GZP1 204 aa5.57□□□□□ -1.52
TARDBP-208ENST00000477447 MRPL18Q9H0U6 180 aaKnown RBP5.57□□□□□ -1.52
TARDBP-208ENST00000477447 CBX8Q9HC52 389 aa5.57□□□□□ -1.52
TARDBP-208ENST00000477447 LOC100289279A0A1B0GTE1 492 aa5.56□□□□□ -1.52
TARDBP-208ENST00000477447 F6X3S4 739 aa5.56□□□□□ -1.52
TARDBP-208ENST00000477447 ECEL1O95672 775 aa5.56□□□□□ -1.52
TARDBP-208ENST00000477447 CTSBP07858 339 aa5.56□□□□□ -1.52
TARDBP-208ENST00000477447 PDE3AQ14432 1141 aa5.56□□□□□ -1.52
TARDBP-208ENST00000477447 IGF2-ASQ6U949 168 aa5.56□□□□□ -1.52
TARDBP-208ENST00000477447 AGGF1Q8N302 714 aaeCLIP5.56□□□□□ -1.52
TARDBP-208ENST00000477447 STK35Q8TDR2 534 aa5.56□□□□□ -1.52
TARDBP-208ENST00000477447 DCAF5Q96JK2 942 aa5.56□□□□□ -1.52
TARDBP-208ENST00000477447 NOC4LQ9BVI4 516 aaKnown RBP5.56□□□□□ -1.52
TARDBP-208ENST00000477447 ZC3H12CQ9C0D7 883 aaKnown RBP5.56□□□□□ -1.52
TARDBP-208ENST00000477447 SAMM50Q9Y512 469 aa5.56□□□□□ -1.52
TARDBP-208ENST00000477447 SCAMP3O14828 347 aaKnown RBP5.55□□□□□ -1.52
TARDBP-208ENST00000477447 GSTP1P09211 210 aaKnown RBP5.55□□□□□ -1.52
TARDBP-208ENST00000477447 ZNF76P36508 570 aa5.55□□□□□ -1.52
TARDBP-208ENST00000477447 LIG3P49916 1009 aa5.55□□□□□ -1.52
TARDBP-208ENST00000477447 RASSF7Q02833 373 aa5.55□□□□□ -1.52
TARDBP-208ENST00000477447 TTBK2Q6IQ55 1244 aa5.55□□□□□ -1.52
TARDBP-208ENST00000477447 HS2ST1Q7LGA3 356 aa5.55□□□□□ -1.52
TARDBP-208ENST00000477447 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.55□□□□□ -1.52
TARDBP-208ENST00000477447 KCNB2Q92953 911 aa5.55□□□□□ -1.52
TARDBP-208ENST00000477447 RUSC1Q9BVN2 902 aa5.55□□□□□ -1.52
TARDBP-208ENST00000477447 KRBA1A5PL33 1030 aa5.54□□□□□ -1.52
TARDBP-208ENST00000477447 C9orf172C9J069 976 aa5.54□□□□□ -1.52
TARDBP-208ENST00000477447 DLGAP3O95886 979 aa5.54□□□□□ -1.52
TARDBP-208ENST00000477447 LMNB1P20700 586 aa5.54□□□□□ -1.52
TARDBP-208ENST00000477447 ARNTP27540 789 aa5.54□□□□□ -1.52
TARDBP-208ENST00000477447 FANCCQ00597 558 aa5.54□□□□□ -1.52
TARDBP-208ENST00000477447 KCNMA1Q12791 1236 aa5.54□□□□□ -1.52
TARDBP-208ENST00000477447 RASIP1Q5U651 963 aa5.54□□□□□ -1.52
TARDBP-208ENST00000477447 MAP1SQ66K74 1059 aaPredicted RBP5.54□□□□□ -1.52
TARDBP-208ENST00000477447 LLGL2Q6P1M3 1020 aa5.54□□□□□ -1.52
TARDBP-208ENST00000477447 KIAA1211Q6ZU35 1233 aa5.54□□□□□ -1.52
TARDBP-208ENST00000477447 NPM2Q86SE8 214 aaKnown RBP5.54□□□□□ -1.52
TARDBP-208ENST00000477447 GRIN3AQ8TCU5 1115 aa5.54□□□□□ -1.52
TARDBP-208ENST00000477447 LENG1Q96BZ8 264 aaPredicted RBP5.54□□□□□ -1.52
TARDBP-208ENST00000477447 EMILIN2Q9BXX0 1053 aa5.54□□□□□ -1.52
TARDBP-208ENST00000477447 METTL5Q9NRN9 209 aaKnown RBP5.54□□□□□ -1.52
TARDBP-208ENST00000477447 GGT7Q9UJ14 662 aa5.54□□□□□ -1.52
TARDBP-208ENST00000477447 F8W735 103 aaPredicted RBP5.53□□□□□ -1.52
TARDBP-208ENST00000477447 ALX3O95076 343 aa5.53□□□□□ -1.52
TARDBP-208ENST00000477447 BMP6P22004 513 aa5.53□□□□□ -1.52
TARDBP-208ENST00000477447 CHRNA4P43681 627 aa5.53□□□□□ -1.52
TARDBP-208ENST00000477447 GSK3AP49840 483 aa5.53□□□□□ -1.52
TARDBP-208ENST00000477447 NRG1Q02297 640 aaPredicted RBP5.53□□□□□ -1.52
TARDBP-208ENST00000477447 MBTPS1Q14703 1052 aa5.53□□□□□ -1.52
TARDBP-208ENST00000477447 HP1BP3Q5SSJ5 553 aaPredicted RBP5.53□□□□□ -1.52
TARDBP-208ENST00000477447 PDZD3Q86UT5 571 aa5.53□□□□□ -1.52
TARDBP-208ENST00000477447 RNF34Q969K3 372 aa5.53□□□□□ -1.52
TARDBP-208ENST00000477447 ACSBG1Q96GR2 724 aa5.53□□□□□ -1.52
TARDBP-208ENST00000477447 RNF208Q9H0X6 261 aa5.53□□□□□ -1.52
TARDBP-208ENST00000477447 CCDC86Q9H6F5 360 aaKnown RBP5.53□□□□□ -1.52
TARDBP-208ENST00000477447 AKTIPQ9H8T0 292 aa5.53□□□□□ -1.52
TARDBP-208ENST00000477447 GDF11O95390 407 aa5.52□□□□□ -1.53
TARDBP-208ENST00000477447 RLBP1P12271 317 aa5.52□□□□□ -1.53
TARDBP-208ENST00000477447 TCF3P15923 654 aa5.52□□□□□ -1.53
TARDBP-208ENST00000477447 GLB1P16278 677 aa5.52□□□□□ -1.53
TARDBP-208ENST00000477447 LIG1P18858 919 aa5.52□□□□□ -1.53
TARDBP-208ENST00000477447 GBP2P32456 591 aaPredicted RBP5.52□□□□□ -1.53
TARDBP-208ENST00000477447 IREB2P48200 963 aaKnown RBP5.52□□□□□ -1.53
TARDBP-208ENST00000477447 HDLBPQ00341 1268 aaKnown RBP5.52□□□□□ -1.53
TARDBP-208ENST00000477447 HNRNPUQ00839 825 aaKnown RBP eCLIP5.52□□□□□ -1.53
TARDBP-208ENST00000477447 ZNF252P-AS1Q0IIN9 211 aa5.52□□□□□ -1.53
TARDBP-208ENST00000477447 ADGRE1Q14246 886 aa5.52□□□□□ -1.53
TARDBP-208ENST00000477447 LRRC14Q15048 493 aa5.52□□□□□ -1.53
TARDBP-208ENST00000477447 C9orf131Q5VYM1 1079 aa5.52□□□□□ -1.53
TARDBP-208ENST00000477447 ERMP1Q7Z2K6 904 aa5.52□□□□□ -1.53
TARDBP-208ENST00000477447 CD163Q86VB7 1156 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms