RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 CRKP46108 304 aa15.19■□□□□ 0.02
CLCNKA-205ENST00000477360 RASGRF1Q13972 1273 aa15.19■□□□□ 0.02
CLCNKA-205ENST00000477360 CCDC158Q5M9N0 1113 aa15.19■□□□□ 0.02
CLCNKA-205ENST00000477360 SAPCD2Q86UD0 394 aa15.19■□□□□ 0.02
CLCNKA-205ENST00000477360 KIF1BPQ96EK5 621 aa15.19■□□□□ 0.02
CLCNKA-205ENST00000477360 FAM163AQ96GL9 167 aaPredicted RBP15.19■□□□□ 0.02
CLCNKA-205ENST00000477360 IQSEC3Q9UPP2 1182 aaPredicted RBP15.19■□□□□ 0.02
CLCNKA-205ENST00000477360 MAP4K4O95819 1239 aaPredicted RBP15.18■□□□□ 0.02
CLCNKA-205ENST00000477360 LDHBP07195 334 aaKnown RBP15.18■□□□□ 0.02
CLCNKA-205ENST00000477360 NF2P35240 595 aa15.18■□□□□ 0.02
CLCNKA-205ENST00000477360 ECE1P42892 770 aa15.18■□□□□ 0.02
CLCNKA-205ENST00000477360 DEFB115Q30KQ5 88 aa15.18■□□□□ 0.02
CLCNKA-205ENST00000477360 SPDYE2Q495Y8 402 aa15.18■□□□□ 0.02
CLCNKA-205ENST00000477360 C2orf69Q8N8R5 385 aa15.18■□□□□ 0.02
CLCNKA-205ENST00000477360 PRMT6Q96LA8 375 aaPredicted RBP15.18■□□□□ 0.02
CLCNKA-205ENST00000477360 SUPT16HQ9Y5B9 1047 aaKnown RBP15.18■□□□□ 0.02
CLCNKA-205ENST00000477360 TRPM7Q96QT4 1865 aa15.18■□□□□ 0.02
CLCNKA-205ENST00000477360 ADM5C9JUS6 153 aa15.17■□□□□ 0.02
CLCNKA-205ENST00000477360 CLASRPQ8N2M8 674 aaKnown RBP15.17■□□□□ 0.02
CLCNKA-205ENST00000477360 SPATA5Q8NB90 893 aa15.17■□□□□ 0.02
CLCNKA-205ENST00000477360 RHPN1Q8TCX5 695 aa15.17■□□□□ 0.02
CLCNKA-205ENST00000477360 CDCA5Q96FF9 252 aa15.17■□□□□ 0.02
CLCNKA-205ENST00000477360 GBA2Q9HCG7 927 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-205ENST00000477360 ABT1Q9ULW3 272 aaKnown RBP15.17■□□□□ 0.02
CLCNKA-205ENST00000477360 JAG2Q9Y219 1238 aa15.17■□□□□ 0.02
CLCNKA-205ENST00000477360 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-205ENST00000477360 ASTN2O75129 1339 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-205ENST00000477360 F8W031 263 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-205ENST00000477360 TNNI2P48788 182 aa15.16■□□□□ 0.02
CLCNKA-205ENST00000477360 RBM5P52756 815 aaKnown RBP eCLIP15.16■□□□□ 0.02
CLCNKA-205ENST00000477360 FAM83AQ86UY5 434 aa15.16■□□□□ 0.02
CLCNKA-205ENST00000477360 EAF2Q96CJ1 260 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-205ENST00000477360 DEFB129Q9H1M3 183 aa15.16■□□□□ 0.02
CLCNKA-205ENST00000477360 HMG20BQ9P0W2 317 aa15.16■□□□□ 0.02
CLCNKA-205ENST00000477360 EXOC6BQ9Y2D4 811 aa15.16■□□□□ 0.02
CLCNKA-205ENST00000477360 MAP2K2P36507 400 aa15.15■□□□□ 0.02
CLCNKA-205ENST00000477360 GSTO1P78417 241 aa15.15■□□□□ 0.02
CLCNKA-205ENST00000477360 SUPT20HL1Q3ZLR7 823 aa15.15■□□□□ 0.02
CLCNKA-205ENST00000477360 APOBEC3HQ6NTF7 200 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-205ENST00000477360 HOOK2Q96ED9 719 aa15.15■□□□□ 0.02
CLCNKA-205ENST00000477360 DCTPP1Q9H773 170 aa15.15■□□□□ 0.02
CLCNKA-205ENST00000477360 DBNLQ9UJU6 430 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-205ENST00000477360 GAKO14976 1311 aa15.15■□□□□ 0.02
CLCNKA-205ENST00000477360 PRDX5P30044 214 aa15.14■□□□□ 0.01
CLCNKA-205ENST00000477360 HTRA3P83110 453 aa15.14■□□□□ 0.01
CLCNKA-205ENST00000477360 GRIK5Q16478 980 aa15.14■□□□□ 0.01
CLCNKA-205ENST00000477360 MAP3K11Q16584 847 aa15.14■□□□□ 0.01
CLCNKA-205ENST00000477360 TTC39AQ5SRH9 613 aa15.14■□□□□ 0.01
CLCNKA-205ENST00000477360 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.14■□□□□ 0.01
CLCNKA-205ENST00000477360 CCDC102AQ96A19 550 aa15.14■□□□□ 0.01
CLCNKA-205ENST00000477360 DBNDD2Q9BQY9 259 aa15.14■□□□□ 0.01
CLCNKA-205ENST00000477360 TMOD2Q9NZR1 351 aa15.14■□□□□ 0.01
CLCNKA-205ENST00000477360 ZNF70Q9UC06 446 aaPredicted RBP15.14■□□□□ 0.01
CLCNKA-205ENST00000477360 ECM29Q5VYK3 1845 aa15.14■□□□□ 0.01
CLCNKA-205ENST00000477360 RPAP1Q9BWH6 1393 aaPredicted RBP15.13■□□□□ 0.01
CLCNKA-205ENST00000477360 NPM3O75607 178 aaKnown RBP15.13■□□□□ 0.01
CLCNKA-205ENST00000477360 LDHCP07864 332 aa15.13■□□□□ 0.01
CLCNKA-205ENST00000477360 MCAMP43121 646 aa15.13■□□□□ 0.01
CLCNKA-205ENST00000477360 ERICH6Q7L0X2 663 aa15.13■□□□□ 0.01
CLCNKA-205ENST00000477360 CERS3Q8IU89 383 aa15.13■□□□□ 0.01
CLCNKA-205ENST00000477360 REM2Q8IYK8 340 aaPredicted RBP15.13■□□□□ 0.01
CLCNKA-205ENST00000477360 LRRCC1Q9C099 1032 aa15.13■□□□□ 0.01
CLCNKA-205ENST00000477360 MYH13Q9UKX3 1938 aa15.13■□□□□ 0.01
CLCNKA-205ENST00000477360 PAPPA2Q9BXP8 1791 aa15.13■□□□□ 0.01
CLCNKA-205ENST00000477360 HUNKP57058 714 aa15.12■□□□□ 0.01
CLCNKA-205ENST00000477360 FMR1Q06787 632 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLCNKA-205ENST00000477360 AACSQ86V21 672 aa15.12■□□□□ 0.01
CLCNKA-205ENST00000477360 DZIP1Q86YF9 867 aaKnown RBP15.12■□□□□ 0.01
CLCNKA-205ENST00000477360 MKRN1Q9UHC7 482 aaKnown RBP15.12■□□□□ 0.01
CLCNKA-205ENST00000477360 DAGLAQ9Y4D2 1042 aa15.12■□□□□ 0.01
CLCNKA-205ENST00000477360 WDR33Q9C0J8 1336 aaKnown RBP15.12■□□□□ 0.01
CLCNKA-205ENST00000477360 POLR2AP24928 1970 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-205ENST00000477360 PPP1R12BO60237 982 aaPredicted RBP15.11■□□□□ 0.01
CLCNKA-205ENST00000477360 IFIT2P09913 472 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-205ENST00000477360 VEGFBP49765 207 aa15.11■□□□□ 0.01
CLCNKA-205ENST00000477360 NOGQ13253 232 aa15.11■□□□□ 0.01
CLCNKA-205ENST00000477360 RASA3Q14644 834 aa15.11■□□□□ 0.01
CLCNKA-205ENST00000477360 RGMBQ6NW40 437 aa15.11■□□□□ 0.01
CLCNKA-205ENST00000477360 NSUN4Q96CB9 384 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-205ENST00000477360 CAPNS2Q96L46 248 aa15.11■□□□□ 0.01
CLCNKA-205ENST00000477360 TDRD3Q9H7E2 651 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-205ENST00000477360 ZNF408Q9H9D4 720 aa15.11■□□□□ 0.01
CLCNKA-205ENST00000477360 VEZTQ9HBM0 779 aa15.11■□□□□ 0.01
CLCNKA-205ENST00000477360 ABCF2Q9UG63 623 aa15.11■□□□□ 0.01
CLCNKA-205ENST00000477360 THSD7BQ9C0I4 1608 aa15.1■□□□□ 0.01
CLCNKA-205ENST00000477360 GPR75-ASB3A0A0A6YYF3 556 aa15.1■□□□□ 0.01
CLCNKA-205ENST00000477360 CLRN2A0PK11 232 aa15.1■□□□□ 0.01
CLCNKA-205ENST00000477360 MAP2K1Q02750 393 aaPredicted RBP15.1■□□□□ 0.01
CLCNKA-205ENST00000477360 HDAC1Q13547 482 aaPredicted RBP15.1■□□□□ 0.01
CLCNKA-205ENST00000477360 TTF1Q15361 905 aaPredicted RBP15.1■□□□□ 0.01
CLCNKA-205ENST00000477360 LDLRAD1Q5T700 205 aa15.1■□□□□ 0.01
CLCNKA-205ENST00000477360 ARMC9Q7Z3E5 817 aa15.1■□□□□ 0.01
CLCNKA-205ENST00000477360 IDI2Q9BXS1 227 aa15.1■□□□□ 0.01
CLCNKA-205ENST00000477360 CCDC8Q9H0W5 538 aaPredicted RBP15.1■□□□□ 0.01
CLCNKA-205ENST00000477360 PCDHAC2Q9Y5I4 1007 aa15.1■□□□□ 0.01
CLCNKA-205ENST00000477360 MROH7-TTC4A0A0A0MT08 1334 aa15.1■□□□□ 0.01
CLCNKA-205ENST00000477360 ENTPD3O75355 529 aa15.09■□□□□ 0.01
CLCNKA-205ENST00000477360 CYP2E1P05181 493 aaPredicted RBP15.09■□□□□ 0.01
CLCNKA-205ENST00000477360 MECOMQ03112 1051 aa15.09■□□□□ 0.01
CLCNKA-205ENST00000477360 FAM151AQ8WW52 585 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms