RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 NAPBQ9H115 298 aa7.86□□□□□ -1.15
CCDC30-209ENST00000477155 HMGB1P09429 215 aaKnown RBP7.86□□□□□ -1.15
CCDC30-209ENST00000477155 HMGB2P26583 209 aaKnown RBP7.86□□□□□ -1.15
CCDC30-209ENST00000477155 CCT2P78371 535 aaKnown RBP7.86□□□□□ -1.15
CCDC30-209ENST00000477155 CTDSPL2Q05D32 466 aa7.86□□□□□ -1.15
CCDC30-209ENST00000477155 NAA16Q6N069 864 aaPredicted RBP7.86□□□□□ -1.15
CCDC30-209ENST00000477155 RALYLQ86SE5 291 aaKnown RBP7.86□□□□□ -1.15
CCDC30-209ENST00000477155 FBXO41Q8TF61 875 aa7.86□□□□□ -1.15
CCDC30-209ENST00000477155 CASZ1Q86V15 1759 aa7.86□□□□□ -1.15
CCDC30-209ENST00000477155 GSG1L2A8MUP6 293 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 TRAK2O60296 914 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 BBOX1O75936 387 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 SYT1P21579 422 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 TDO2P48775 406 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 EXOSC10Q01780 885 aaKnown RBP7.85□□□□□ -1.15
CCDC30-209ENST00000477155 RAB11FIP4Q86YS3 637 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 FLAD1Q8NFF5 587 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 NKX2-3Q8TAU0 364 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 ZNF622Q969S3 477 aaKnown RBP eCLIP7.85□□□□□ -1.15
CCDC30-209ENST00000477155 PDGFDQ9GZP0 370 aaPredicted RBP7.85□□□□□ -1.15
CCDC30-209ENST00000477155 EPB41L4AQ9HCS5 686 aaPredicted RBP7.85□□□□□ -1.15
CCDC30-209ENST00000477155 TOMM22Q9NS69 142 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 ZNF219Q9P2Y4 722 aaPredicted RBP7.85□□□□□ -1.15
CCDC30-209ENST00000477155 LEMD3Q9Y2U8 911 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 COL1A1P02452 1464 aaPredicted RBP7.85□□□□□ -1.15
CCDC30-209ENST00000477155 MAGEB6P1A0A0J9YX57 407 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 RIMBP2O15034 1052 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 TRDNQ13061 729 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 TPRNQ4KMQ1 711 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 TBC1D10CQ8IV04 446 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 IL27Q8NEV9 243 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 ZNF384Q8TF68 577 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 BRIP1Q9BX63 1249 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 GGA1Q9UJY5 639 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 MINDY4BA8MYZ0 360 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 BRD1O95696 1058 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 DEKP35659 375 aaKnown RBP7.85□□□□□ -1.15
CCDC30-209ENST00000477155 MECOMQ03112 1051 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 SLC15A2Q16348 729 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 RRP12Q5JTH9 1297 aaKnown RBP7.85□□□□□ -1.15
CCDC30-209ENST00000477155 NCOA7Q8NI08 942 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 DDX11Q96FC9 970 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 CAMKK2Q96RR4 588 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 NBPF3Q9H094 633 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 POLLQ9UGP5 575 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 MYH7P12883 1935 aa7.85□□□□□ -1.15
CCDC30-209ENST00000477155 DDX11L8A8MPP1 907 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 B4E1Z4 1266 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 SMIM22K7EJ46 135 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 PRC1O43663 620 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 NCOA5Q9HCD5 579 aaKnown RBP7.84□□□□□ -1.15
CCDC30-209ENST00000477155 AATFQ9NY61 560 aaKnown RBP eCLIP7.84□□□□□ -1.15
CCDC30-209ENST00000477155 VPS37CA5D8V6 355 aaPredicted RBP7.84□□□□□ -1.15
CCDC30-209ENST00000477155 GOLGA6L22H0YM25 854 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 STX6O43752 255 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 JAK2O60674 1132 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 SRGNP10124 158 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 HOXA10P31260 410 aaPredicted RBP7.84□□□□□ -1.15
CCDC30-209ENST00000477155 SF3B2Q13435 895 aaKnown RBP7.84□□□□□ -1.15
CCDC30-209ENST00000477155 NSUN4Q96CB9 384 aaKnown RBP7.84□□□□□ -1.15
CCDC30-209ENST00000477155 NACAP1Q9BZK3 213 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 ALDH8A1Q9H2A2 487 aaPredicted RBP7.84□□□□□ -1.15
CCDC30-209ENST00000477155 STK32BQ9NY57 414 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 PPEF1O14829 653 aaPredicted RBP7.84□□□□□ -1.15
CCDC30-209ENST00000477155 PRPF40AO75400 957 aaKnown RBP7.84□□□□□ -1.15
CCDC30-209ENST00000477155 MCM5P33992 734 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 SCRN1Q12765 414 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 GSE1Q14687 1217 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 GRIK5Q16478 980 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 SLC4A8Q2Y0W8 1093 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 LARP1BQ659C4 914 aaKnown RBP7.84□□□□□ -1.15
CCDC30-209ENST00000477155 ZNF804AQ7Z570 1209 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 CRAMP1Q96RY5 1269 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 GDPD2Q9HCC8 539 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 TAOK2Q9UL54 1235 aa7.84□□□□□ -1.15
CCDC30-209ENST00000477155 ARAP2Q8WZ64 1704 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 SEMA3EO15041 775 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 NCLP19338 710 aaKnown RBP7.83□□□□□ -1.16
CCDC30-209ENST00000477155 FOSBP53539 338 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 DZIP1Q86YF9 867 aaKnown RBP7.83□□□□□ -1.16
CCDC30-209ENST00000477155 TBC1D16Q8TBP0 767 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 WDR33Q9C0J8 1336 aaKnown RBP7.83□□□□□ -1.16
CCDC30-209ENST00000477155 CYP2D7A0A087X1C5 515 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 KLRG2A4D1S0 409 aaPredicted RBP7.83□□□□□ -1.16
CCDC30-209ENST00000477155 ATP2B4P23634 1241 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 ANTXR2P58335 489 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 DIXDC1Q155Q3 683 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 MB21D2Q8IYB1 491 aaPredicted RBP7.83□□□□□ -1.16
CCDC30-209ENST00000477155 FBXW7Q969H0 707 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 RIOK1Q9BRS2 568 aaKnown RBP7.83□□□□□ -1.16
CCDC30-209ENST00000477155 CD209Q9NNX6 404 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 IRS2Q9Y4H2 1338 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 GNAT2P19087 354 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 PDE6BP35913 854 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 CYB5R4Q7L1T6 521 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 FERMT3Q86UX7 667 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 TDRD7Q8NHU6 1098 aaKnown RBP7.83□□□□□ -1.16
CCDC30-209ENST00000477155 GTF3C6Q969F1 213 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 ZKSCAN3Q9BRR0 538 aa7.83□□□□□ -1.16
CCDC30-209ENST00000477155 TACC3Q9Y6A5 838 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms