RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 WBP1LQ9NX94 342 aa9.38□□□□□ -0.91
BRCA1-214ENST00000477152 GPRC5DQ9NZD1 345 aa9.38□□□□□ -0.91
BRCA1-214ENST00000477152 SNED1Q8TER0 1413 aa9.37□□□□□ -0.91
BRCA1-214ENST00000477152 CHL1O00533 1208 aa9.37□□□□□ -0.91
BRCA1-214ENST00000477152 CA12O43570 354 aa9.37□□□□□ -0.91
BRCA1-214ENST00000477152 SCNN1DP51172 638 aa9.37□□□□□ -0.91
BRCA1-214ENST00000477152 KIAA2012Q0VF49 1180 aa9.37□□□□□ -0.91
BRCA1-214ENST00000477152 LAMB2P55268 1798 aa9.37□□□□□ -0.91
BRCA1-214ENST00000477152 MAP2K2P36507 400 aa9.37□□□□□ -0.91
BRCA1-214ENST00000477152 EPS15P42566 896 aa9.37□□□□□ -0.91
BRCA1-214ENST00000477152 HELBQ8NG08 1087 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-214ENST00000477152 NECTIN2Q92692 538 aa9.37□□□□□ -0.91
BRCA1-214ENST00000477152 CXCL9Q07325 125 aa9.36□□□□□ -0.91
BRCA1-214ENST00000477152 WASHC4Q2M389 1173 aa9.36□□□□□ -0.91
BRCA1-214ENST00000477152 CDC37L1Q7L3B6 337 aa9.36□□□□□ -0.91
BRCA1-214ENST00000477152 HHIPL1Q96JK4 782 aa9.36□□□□□ -0.91
BRCA1-214ENST00000477152 DDX60Q8IY21 1712 aaKnown RBP9.36□□□□□ -0.91
BRCA1-214ENST00000477152 DDX58O95786 925 aaKnown RBP9.35□□□□□ -0.91
BRCA1-214ENST00000477152 HCLS1P14317 486 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-214ENST00000477152 RPS12P25398 132 aaKnown RBP9.35□□□□□ -0.91
BRCA1-214ENST00000477152 IRF5Q13568 498 aa9.35□□□□□ -0.91
BRCA1-214ENST00000477152 LRP10Q7Z4F1 713 aa9.35□□□□□ -0.91
BRCA1-214ENST00000477152 CAPNS2Q96L46 248 aa9.35□□□□□ -0.91
BRCA1-214ENST00000477152 GPR101Q96P66 508 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-214ENST00000477152 CHPF2Q9P2E5 772 aa9.35□□□□□ -0.91
BRCA1-214ENST00000477152 TLL2Q9Y6L7 1015 aa9.35□□□□□ -0.91
BRCA1-214ENST00000477152 ANXA1P04083 346 aa9.35□□□□□ -0.91
BRCA1-214ENST00000477152 GMPSP49915 693 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-214ENST00000477152 LBX1P52954 281 aa9.35□□□□□ -0.91
BRCA1-214ENST00000477152 GNAI1P63096 354 aa9.35□□□□□ -0.91
BRCA1-214ENST00000477152 DDX10Q13206 875 aaKnown RBP9.35□□□□□ -0.91
BRCA1-214ENST00000477152 SF3B3Q15393 1217 aaKnown RBP9.35□□□□□ -0.91
BRCA1-214ENST00000477152 NR6A1Q15406 480 aa9.35□□□□□ -0.91
BRCA1-214ENST00000477152 SCUBE3Q8IX30 993 aa9.35□□□□□ -0.91
BRCA1-214ENST00000477152 CCDC146Q8IYE0 955 aa9.35□□□□□ -0.91
BRCA1-214ENST00000477152 DPF2Q92785 391 aa9.35□□□□□ -0.91
BRCA1-214ENST00000477152 NSFL1CQ9UNZ2 370 aaKnown RBP9.35□□□□□ -0.91
BRCA1-214ENST00000477152 TRIM28Q13263 835 aaKnown RBP9.34□□□□□ -0.91
BRCA1-214ENST00000477152 PROSER3Q2NL68 480 aa9.34□□□□□ -0.91
BRCA1-214ENST00000477152 ZC3H12CQ9C0D7 883 aaKnown RBP9.34□□□□□ -0.91
BRCA1-214ENST00000477152 PLSCR2Q9NRY7 297 aa9.34□□□□□ -0.91
BRCA1-214ENST00000477152 CNOT7Q9UIV1 285 aaKnown RBP9.34□□□□□ -0.91
BRCA1-214ENST00000477152 TSR3Q9UJK0 312 aaKnown RBP9.34□□□□□ -0.91
BRCA1-214ENST00000477152 RAD17O75943 681 aa9.33□□□□□ -0.92
BRCA1-214ENST00000477152 CELF2O95319 508 aaKnown RBP9.33□□□□□ -0.92
BRCA1-214ENST00000477152 GRM1Q13255 1194 aa9.33□□□□□ -0.92
BRCA1-214ENST00000477152 DUSP27Q5VZP5 1158 aa9.33□□□□□ -0.92
BRCA1-214ENST00000477152 ISCA1Q9BUE6 129 aa9.33□□□□□ -0.92
BRCA1-214ENST00000477152 PGAP2Q9UHJ9 254 aa9.33□□□□□ -0.92
BRCA1-214ENST00000477152 IRS4O14654 1257 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-214ENST00000477152 HSPA8P11142 646 aaKnown RBP9.33□□□□□ -0.92
BRCA1-214ENST00000477152 LTBP1Q14766 1721 aa9.33□□□□□ -0.92
BRCA1-214ENST00000477152 CCDC152Q4G0S7 254 aa9.33□□□□□ -0.92
BRCA1-214ENST00000477152 RETREG3Q86VR2 466 aa9.33□□□□□ -0.92
BRCA1-214ENST00000477152 DCPSQ96C86 337 aaKnown RBP9.33□□□□□ -0.92
BRCA1-214ENST00000477152 IFT57Q9NWB7 429 aa9.33□□□□□ -0.92
BRCA1-214ENST00000477152 LRRC37AA6NMS7 1700 aa9.32□□□□□ -0.92
BRCA1-214ENST00000477152 RPS8P62241 208 aaKnown RBP9.32□□□□□ -0.92
BRCA1-214ENST00000477152 CCDC30Q5VVM6 783 aa9.32□□□□□ -0.92
BRCA1-214ENST00000477152 C2orf69Q8N8R5 385 aa9.32□□□□□ -0.92
BRCA1-214ENST00000477152 ZBTB38Q8NAP3 1195 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-214ENST00000477152 CCDC191Q8NCU4 936 aa9.32□□□□□ -0.92
BRCA1-214ENST00000477152 FAM89AQ96GI7 184 aa9.32□□□□□ -0.92
BRCA1-214ENST00000477152 ADAMTS8Q9UP79 889 aa9.32□□□□□ -0.92
BRCA1-214ENST00000477152 PCDHB3Q9Y5E6 796 aa9.32□□□□□ -0.92
BRCA1-214ENST00000477152 NDUFB9Q9Y6M9 179 aa9.32□□□□□ -0.92
BRCA1-214ENST00000477152 THSD7BQ9C0I4 1608 aa9.32□□□□□ -0.92
BRCA1-214ENST00000477152 COL4A5P29400 1685 aa9.32□□□□□ -0.92
BRCA1-214ENST00000477152 NEXNQ0ZGT2 675 aa9.32□□□□□ -0.92
BRCA1-214ENST00000477152 NOGQ13253 232 aa9.32□□□□□ -0.92
BRCA1-214ENST00000477152 CYP4F22Q6NT55 531 aa9.32□□□□□ -0.92
BRCA1-214ENST00000477152 ZNF408Q9H9D4 720 aa9.32□□□□□ -0.92
BRCA1-214ENST00000477152 ANKIB1Q9P2G1 1089 aa9.32□□□□□ -0.92
BRCA1-214ENST00000477152 ATP5J2-PTCD1G3V325 749 aa9.31□□□□□ -0.92
BRCA1-214ENST00000477152 COPS2P61201 443 aa9.31□□□□□ -0.92
BRCA1-214ENST00000477152 CST9Q5W186 159 aa9.31□□□□□ -0.92
BRCA1-214ENST00000477152 BRICD5Q6PL45 260 aa9.31□□□□□ -0.92
BRCA1-214ENST00000477152 SAPCD2Q86UD0 394 aa9.31□□□□□ -0.92
BRCA1-214ENST00000477152 KCTD12Q96CX2 325 aaKnown RBP9.31□□□□□ -0.92
BRCA1-214ENST00000477152 GGA1Q9UJY5 639 aa9.31□□□□□ -0.92
BRCA1-214ENST00000477152 TRAF5O00463 557 aa9.3□□□□□ -0.92
BRCA1-214ENST00000477152 ECE2O60344 883 aa9.3□□□□□ -0.92
BRCA1-214ENST00000477152 PDE8AO60658 829 aa9.3□□□□□ -0.92
BRCA1-214ENST00000477152 MMP14P50281 582 aa9.3□□□□□ -0.92
BRCA1-214ENST00000477152 VAC14Q08AM6 782 aa9.3□□□□□ -0.92
BRCA1-214ENST00000477152 ADAMTS19Q8TE59 1207 aa9.3□□□□□ -0.92
BRCA1-214ENST00000477152 THAP11Q96EK4 314 aa9.3□□□□□ -0.92
BRCA1-214ENST00000477152 CDC5LQ99459 802 aaKnown RBP9.3□□□□□ -0.92
BRCA1-214ENST00000477152 USB1Q9BQ65 265 aaKnown RBP9.3□□□□□ -0.92
BRCA1-214ENST00000477152 STK31Q9BXU1 1019 aa9.3□□□□□ -0.92
BRCA1-214ENST00000477152 GLIS2Q9BZE0 524 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-214ENST00000477152 MBIPQ9NS73 344 aa9.3□□□□□ -0.92
BRCA1-214ENST00000477152 CWC25Q9NXE8 425 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-214ENST00000477152 TAF1P21675 1872 aa9.3□□□□□ -0.92
BRCA1-214ENST00000477152 PSMD14O00487 310 aa9.3□□□□□ -0.92
BRCA1-214ENST00000477152 PCCAP05165 728 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-214ENST00000477152 KRT26Q7Z3Y9 468 aa9.3□□□□□ -0.92
BRCA1-214ENST00000477152 ANKRD18AQ8IVF6 992 aa9.3□□□□□ -0.92
BRCA1-214ENST00000477152 PODXL2Q9NZ53 605 aa9.3□□□□□ -0.92
BRCA1-214ENST00000477152 ATP2B4P23634 1241 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms