RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 CNNM1Q9NRU3 951 aa24.59■■□□□ 1.53
LIMS2-214ENST00000476932 GJB4Q9NTQ9 266 aa24.59■■□□□ 1.53
LIMS2-214ENST00000476932 BTG4Q9NY30 223 aa24.59■■□□□ 1.53
LIMS2-214ENST00000476932 CLIC4Q9Y696 253 aa24.58■■□□□ 1.53
LIMS2-214ENST00000476932 COL14A1Q05707 1796 aaKnown RBP24.58■■□□□ 1.52
LIMS2-214ENST00000476932 NEDD4P46934 1319 aa24.58■■□□□ 1.52
LIMS2-214ENST00000476932 UBN2Q6ZU65 1347 aa24.58■■□□□ 1.52
LIMS2-214ENST00000476932 A0A1W2PQ27 194 aa24.58■■□□□ 1.52
LIMS2-214ENST00000476932 A0A1W2PQ64 194 aa24.58■■□□□ 1.52
LIMS2-214ENST00000476932 A0A1W2PQD8 194 aa24.58■■□□□ 1.52
LIMS2-214ENST00000476932 DHX16O60231 1041 aaKnown RBP24.58■■□□□ 1.52
LIMS2-214ENST00000476932 SLC9C2Q5TAH2 1124 aa24.58■■□□□ 1.52
LIMS2-214ENST00000476932 ZSCAN25Q6NSZ9 544 aa24.58■■□□□ 1.52
LIMS2-214ENST00000476932 MRPS27Q92552 414 aaKnown RBP24.58■■□□□ 1.52
LIMS2-214ENST00000476932 PDE8BO95263 885 aa24.57■■□□□ 1.52
LIMS2-214ENST00000476932 ADALQ6DHV7 355 aa24.57■■□□□ 1.52
LIMS2-214ENST00000476932 DOT1LQ8TEK3 1739 aa24.56■■□□□ 1.52
LIMS2-214ENST00000476932 KIF28PB7ZC32 967 aa24.56■■□□□ 1.52
LIMS2-214ENST00000476932 ARID4AP29374 1257 aaPredicted RBP24.56■■□□□ 1.52
LIMS2-214ENST00000476932 PHKA1P46020 1223 aa24.56■■□□□ 1.52
LIMS2-214ENST00000476932 CCDC144BQ3MJ40 725 aa24.56■■□□□ 1.52
LIMS2-214ENST00000476932 DHX40Q8IX18 779 aaKnown RBP24.56■■□□□ 1.52
LIMS2-214ENST00000476932 DRC7Q8IY82 874 aa24.56■■□□□ 1.52
LIMS2-214ENST00000476932 CCDC144CPQ8IYA2 1237 aa24.56■■□□□ 1.52
LIMS2-214ENST00000476932 POLR3EQ9NVU0 708 aa24.56■■□□□ 1.52
LIMS2-214ENST00000476932 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.56■■□□□ 1.52
LIMS2-214ENST00000476932 UBE3CQ15386 1083 aa24.56■■□□□ 1.52
LIMS2-214ENST00000476932 MYSM1Q5VVJ2 828 aa24.56■■□□□ 1.52
LIMS2-214ENST00000476932 CYB5R4Q7L1T6 521 aa24.56■■□□□ 1.52
LIMS2-214ENST00000476932 MAP7D2Q96T17 732 aa24.56■■□□□ 1.52
LIMS2-214ENST00000476932 TRMT112Q9UI30 125 aaKnown RBP24.56■■□□□ 1.52
LIMS2-214ENST00000476932 TCRBV5S4A2TA0A5A2 114 aa24.55■■□□□ 1.52
LIMS2-214ENST00000476932 POLR3DP05423 398 aaPredicted RBP24.55■■□□□ 1.52
LIMS2-214ENST00000476932 TTF1Q15361 905 aaPredicted RBP24.55■■□□□ 1.52
LIMS2-214ENST00000476932 CCDC102BQ68D86 513 aa24.55■■□□□ 1.52
LIMS2-214ENST00000476932 CLIP2Q9UDT6 1046 aa24.55■■□□□ 1.52
LIMS2-214ENST00000476932 PDE8AO60658 829 aa24.55■■□□□ 1.52
LIMS2-214ENST00000476932 YEATS4O95619 227 aa24.55■■□□□ 1.52
LIMS2-214ENST00000476932 ERCC4Q92889 916 aaPredicted RBP24.55■■□□□ 1.52
LIMS2-214ENST00000476932 ZNF532Q9HCE3 1301 aa24.54■■□□□ 1.52
LIMS2-214ENST00000476932 A0A1B0GVL5 298 aa24.54■■□□□ 1.52
LIMS2-214ENST00000476932 NDUFA8P51970 172 aa24.54■■□□□ 1.52
LIMS2-214ENST00000476932 BRAPQ7Z569 592 aa24.54■■□□□ 1.52
LIMS2-214ENST00000476932 TSC1Q92574 1164 aa24.54■■□□□ 1.52
LIMS2-214ENST00000476932 WWC3Q9ULE0 1092 aa24.54■■□□□ 1.52
LIMS2-214ENST00000476932 ZMYM6O95789 1325 aa24.54■■□□□ 1.52
LIMS2-214ENST00000476932 GOLGA6L19H0YKK7 550 aa24.54■■□□□ 1.52
LIMS2-214ENST00000476932 IDH1O75874 414 aaKnown RBP24.54■■□□□ 1.52
LIMS2-214ENST00000476932 PDE6AP16499 860 aa24.54■■□□□ 1.52
LIMS2-214ENST00000476932 KIF23Q02241 960 aaPredicted RBP24.54■■□□□ 1.52
LIMS2-214ENST00000476932 CACTINQ8WUQ7 758 aaKnown RBP24.54■■□□□ 1.52
LIMS2-214ENST00000476932 MRFAP1L1Q96HT8 127 aa24.54■■□□□ 1.52
LIMS2-214ENST00000476932 ANO10Q9NW15 660 aa24.54■■□□□ 1.52
LIMS2-214ENST00000476932 ANGEL1Q9UNK9 670 aaKnown RBP24.54■■□□□ 1.52
LIMS2-214ENST00000476932 PHLPP1O60346 1717 aa24.53■■□□□ 1.52
LIMS2-214ENST00000476932 SH2B2O14492 632 aaPredicted RBP24.53■■□□□ 1.52
LIMS2-214ENST00000476932 CPLX1O14810 134 aa24.53■■□□□ 1.52
LIMS2-214ENST00000476932 FGFR2P21802 821 aa24.53■■□□□ 1.52
LIMS2-214ENST00000476932 STK38Q15208 465 aa24.53■■□□□ 1.52
LIMS2-214ENST00000476932 KCNG4Q8TDN1 519 aa24.53■■□□□ 1.52
LIMS2-214ENST00000476932 TIAM2Q8IVF5 1701 aa24.53■■□□□ 1.52
LIMS2-214ENST00000476932 COL16A1Q07092 1604 aaPredicted RBP24.52■■□□□ 1.52
LIMS2-214ENST00000476932 ERVV-1B6SEH8 477 aa24.52■■□□□ 1.52
LIMS2-214ENST00000476932 ZNF34Q8IZ26 560 aa24.52■■□□□ 1.52
LIMS2-214ENST00000476932 ZNF710Q8N1W2 664 aa24.51■■□□□ 1.51
LIMS2-214ENST00000476932 SENP2Q9HC62 589 aa24.51■■□□□ 1.51
LIMS2-214ENST00000476932 TBC1D2BQ9UPU7 963 aa24.51■■□□□ 1.51
LIMS2-214ENST00000476932 SPTLC2O15270 562 aa24.51■■□□□ 1.51
LIMS2-214ENST00000476932 DZIP3Q86Y13 1208 aaKnown RBP24.51■■□□□ 1.51
LIMS2-214ENST00000476932 RGS22Q8NE09 1264 aa24.51■■□□□ 1.51
LIMS2-214ENST00000476932 AIFM3Q96NN9 605 aa24.51■■□□□ 1.51
LIMS2-214ENST00000476932 TRDNQ13061 729 aa24.5■■□□□ 1.51
LIMS2-214ENST00000476932 PUM3Q15397 648 aaKnown RBP24.5■■□□□ 1.51
LIMS2-214ENST00000476932 IL6STP40189 918 aaPredicted RBP24.5■■□□□ 1.51
LIMS2-214ENST00000476932 AXDND1Q5T1B0 1012 aaPredicted RBP24.5■■□□□ 1.51
LIMS2-214ENST00000476932 APOA5Q6Q788 366 aa24.5■■□□□ 1.51
LIMS2-214ENST00000476932 CEP57L1Q8IYX8 460 aa24.5■■□□□ 1.51
LIMS2-214ENST00000476932 STRBPQ96SI9 672 aaKnown RBP24.5■■□□□ 1.51
LIMS2-214ENST00000476932 BCORQ6W2J9 1755 aa24.49■■□□□ 1.51
LIMS2-214ENST00000476932 UQCRFS1P1P0C7P4 283 aa24.49■■□□□ 1.51
LIMS2-214ENST00000476932 HELBQ8NG08 1087 aaPredicted RBP24.49■■□□□ 1.51
LIMS2-214ENST00000476932 LPIN2Q92539 896 aa24.49■■□□□ 1.51
LIMS2-214ENST00000476932 MROH7-TTC4A0A0A0MT08 1334 aa24.49■■□□□ 1.51
LIMS2-214ENST00000476932 B4E1Z4 1266 aa24.49■■□□□ 1.51
LIMS2-214ENST00000476932 CDC27P30260 824 aa24.49■■□□□ 1.51
LIMS2-214ENST00000476932 ANO1Q5XXA6 986 aa24.49■■□□□ 1.51
LIMS2-214ENST00000476932 MTERF4Q7Z6M4 381 aaKnown RBP24.49■■□□□ 1.51
LIMS2-214ENST00000476932 AOPEPQ8N6M6 819 aa24.49■■□□□ 1.51
LIMS2-214ENST00000476932 EPB41L4AQ9HCS5 686 aaPredicted RBP24.49■■□□□ 1.51
LIMS2-214ENST00000476932 LAMB2P55268 1798 aa24.48■■□□□ 1.51
LIMS2-214ENST00000476932 RXRAP19793 462 aa24.48■■□□□ 1.51
LIMS2-214ENST00000476932 METAP2P50579 478 aaKnown RBP eCLIP24.48■■□□□ 1.51
LIMS2-214ENST00000476932 SF3A1Q15459 793 aaKnown RBP24.48■■□□□ 1.51
LIMS2-214ENST00000476932 MROH5Q6ZUA9 1318 aa24.48■■□□□ 1.51
LIMS2-214ENST00000476932 BECN2A8MW95 431 aa24.47■■□□□ 1.51
LIMS2-214ENST00000476932 RIOK3O14730 519 aaKnown RBP24.47■■□□□ 1.51
LIMS2-214ENST00000476932 APPP05067 770 aa24.47■■□□□ 1.51
LIMS2-214ENST00000476932 ALX1Q15699 326 aa24.47■■□□□ 1.51
LIMS2-214ENST00000476932 IGDCC4Q8TDY8 1250 aa24.47■■□□□ 1.51
LIMS2-214ENST00000476932 SDF4Q9BRK5 362 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms