RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 DUSP9Q99956 384 aaKnown RBP6.41□□□□□ -1.38
ITGA4-208ENST00000476824 FBXO24O75426 580 aa6.4□□□□□ -1.38
ITGA4-208ENST00000476824 PREPP48147 710 aa6.4□□□□□ -1.38
ITGA4-208ENST00000476824 POU4F3Q15319 338 aa6.4□□□□□ -1.38
ITGA4-208ENST00000476824 ARMC10Q8N2F6 343 aa6.4□□□□□ -1.38
ITGA4-208ENST00000476824 STK35Q8TDR2 534 aa6.4□□□□□ -1.38
ITGA4-208ENST00000476824 ZC3H12CQ9C0D7 883 aaKnown RBP6.4□□□□□ -1.38
ITGA4-208ENST00000476824 RNF208Q9H0X6 261 aa6.4□□□□□ -1.38
ITGA4-208ENST00000476824 PPP4R2Q9NY27 417 aa6.4□□□□□ -1.38
ITGA4-208ENST00000476824 GPN3Q9UHW5 284 aaPredicted RBP6.4□□□□□ -1.38
ITGA4-208ENST00000476824 DRD2P14416 443 aa6.39□□□□□ -1.39
ITGA4-208ENST00000476824 RPS26P11Q5JNZ5 115 aaPredicted RBP6.39□□□□□ -1.39
ITGA4-208ENST00000476824 TPTE2Q6XPS3 522 aa6.39□□□□□ -1.39
ITGA4-208ENST00000476824 FAM46AQ96IP4 442 aaKnown RBP6.39□□□□□ -1.39
ITGA4-208ENST00000476824 TMPRSS13Q9BYE2 586 aa6.39□□□□□ -1.39
ITGA4-208ENST00000476824 ZBTB7CA1YPR0 619 aa6.38□□□□□ -1.39
ITGA4-208ENST00000476824 PRPF40AO75400 957 aaKnown RBP6.38□□□□□ -1.39
ITGA4-208ENST00000476824 CYP11A1P05108 521 aa6.38□□□□□ -1.39
ITGA4-208ENST00000476824 USP17L7P0C7H9 530 aa6.38□□□□□ -1.39
ITGA4-208ENST00000476824 NUTM2GQ5VZR2 741 aa6.38□□□□□ -1.39
ITGA4-208ENST00000476824 FDX2Q6P4F2 183 aa6.38□□□□□ -1.39
ITGA4-208ENST00000476824 FBXO33Q7Z6M2 555 aa6.38□□□□□ -1.39
ITGA4-208ENST00000476824 UTP4Q969X6 686 aaKnown RBP6.38□□□□□ -1.39
ITGA4-208ENST00000476824 FAM161BQ96MY7 647 aa6.38□□□□□ -1.39
ITGA4-208ENST00000476824 CEP41Q9BYV8 373 aa6.38□□□□□ -1.39
ITGA4-208ENST00000476824 C12orf49Q9H741 205 aa6.38□□□□□ -1.39
ITGA4-208ENST00000476824 SPG7Q9UQ90 795 aa6.38□□□□□ -1.39
ITGA4-208ENST00000476824 MEGF11A6BM72 1044 aa6.37□□□□□ -1.39
ITGA4-208ENST00000476824 H2AFB1P0C5Y9 115 aa6.37□□□□□ -1.39
ITGA4-208ENST00000476824 H2AFB2P0C5Z0 115 aa6.37□□□□□ -1.39
ITGA4-208ENST00000476824 XRCC5P13010 732 aaKnown RBP6.37□□□□□ -1.39
ITGA4-208ENST00000476824 GNA15P30679 374 aa6.37□□□□□ -1.39
ITGA4-208ENST00000476824 GSTT1P30711 240 aa6.37□□□□□ -1.39
ITGA4-208ENST00000476824 COL19A1Q14993 1142 aa6.37□□□□□ -1.39
ITGA4-208ENST00000476824 EXOSC6Q5RKV6 272 aaKnown RBP6.37□□□□□ -1.39
ITGA4-208ENST00000476824 ANKRD34AQ69YU3 496 aa6.37□□□□□ -1.39
ITGA4-208ENST00000476824 PRR23CQ6ZRP0 262 aa6.37□□□□□ -1.39
ITGA4-208ENST00000476824 C12orf50Q8NA57 414 aaPredicted RBP6.37□□□□□ -1.39
ITGA4-208ENST00000476824 WDR89Q96FK6 387 aaPredicted RBP6.37□□□□□ -1.39
ITGA4-208ENST00000476824 CORO1BQ9BR76 489 aa6.37□□□□□ -1.39
ITGA4-208ENST00000476824 TMEM39AQ9NV64 488 aa6.37□□□□□ -1.39
ITGA4-208ENST00000476824 PARP2Q9UGN5 583 aa6.37□□□□□ -1.39
ITGA4-208ENST00000476824 SART1O43290 800 aaKnown RBP6.36□□□□□ -1.39
ITGA4-208ENST00000476824 PAGE1O75459 146 aa6.36□□□□□ -1.39
ITGA4-208ENST00000476824 TIAF1O95411 115 aa6.36□□□□□ -1.39
ITGA4-208ENST00000476824 TRIM26Q12899 539 aaPredicted RBP6.36□□□□□ -1.39
ITGA4-208ENST00000476824 AKAP4Q5JQC9 854 aa6.36□□□□□ -1.39
ITGA4-208ENST00000476824 PRSS36Q5K4E3 855 aa6.36□□□□□ -1.39
ITGA4-208ENST00000476824 MPRIPQ6WCQ1 1025 aa6.36□□□□□ -1.39
ITGA4-208ENST00000476824 SMG8Q8ND04 991 aaKnown RBP6.36□□□□□ -1.39
ITGA4-208ENST00000476824 DDX54Q8TDD1 881 aaKnown RBP6.36□□□□□ -1.39
ITGA4-208ENST00000476824 CCDC86Q9H6F5 360 aaKnown RBP6.36□□□□□ -1.39
ITGA4-208ENST00000476824 GIPC1O14908 333 aa6.35□□□□□ -1.39
ITGA4-208ENST00000476824 BMP3P12645 472 aa6.35□□□□□ -1.39
ITGA4-208ENST00000476824 LIG1P18858 919 aa6.35□□□□□ -1.39
ITGA4-208ENST00000476824 AP3B2Q13367 1082 aa6.35□□□□□ -1.39
ITGA4-208ENST00000476824 PDE3AQ14432 1141 aa6.35□□□□□ -1.39
ITGA4-208ENST00000476824 SGO2Q562F6 1265 aa6.35□□□□□ -1.39
ITGA4-208ENST00000476824 TMCO4Q5TGY1 634 aa6.35□□□□□ -1.39
ITGA4-208ENST00000476824 SULF2Q8IWU5 870 aa6.35□□□□□ -1.39
ITGA4-208ENST00000476824 MYRFLQ96LU7 910 aa6.35□□□□□ -1.39
ITGA4-208ENST00000476824 NECAB3Q96P71 396 aaPredicted RBP6.35□□□□□ -1.39
ITGA4-208ENST00000476824 SRCIN1Q9C0H9 1055 aa6.35□□□□□ -1.39
ITGA4-208ENST00000476824 CYP4F12Q9HCS2 524 aa6.35□□□□□ -1.39
ITGA4-208ENST00000476824 FAM8A1Q9UBU6 413 aa6.35□□□□□ -1.39
ITGA4-208ENST00000476824 ENC1O14682 589 aa6.34□□□□□ -1.39
ITGA4-208ENST00000476824 ZNF862O60290 1169 aa6.34□□□□□ -1.39
ITGA4-208ENST00000476824 CELA3AP09093 270 aa6.34□□□□□ -1.39
ITGA4-208ENST00000476824 GSTP1P09211 210 aaKnown RBP6.34□□□□□ -1.39
ITGA4-208ENST00000476824 ADH5P11766 374 aa6.34□□□□□ -1.39
ITGA4-208ENST00000476824 EIF4BP23588 611 aaKnown RBP6.34□□□□□ -1.39
ITGA4-208ENST00000476824 PPP2R3AQ06190 1150 aa6.34□□□□□ -1.39
ITGA4-208ENST00000476824 SOX4Q06945 474 aaPredicted RBP6.34□□□□□ -1.39
ITGA4-208ENST00000476824 RASIP1Q5U651 963 aa6.34□□□□□ -1.39
ITGA4-208ENST00000476824 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.34□□□□□ -1.39
ITGA4-208ENST00000476824 PDZD3Q86UT5 571 aa6.34□□□□□ -1.39
ITGA4-208ENST00000476824 FAM20CQ8IXL6 584 aa6.34□□□□□ -1.39
ITGA4-208ENST00000476824 C2CD4AQ8NCU7 369 aaPredicted RBP6.34□□□□□ -1.39
ITGA4-208ENST00000476824 WDR18Q9BV38 432 aa6.34□□□□□ -1.39
ITGA4-208ENST00000476824 SUGCTQ9HAC7 445 aa6.34□□□□□ -1.39
ITGA4-208ENST00000476824 ZFYVE1Q9HBF4 777 aa6.34□□□□□ -1.39
ITGA4-208ENST00000476824 RAXQ9Y2V3 346 aa6.34□□□□□ -1.39
ITGA4-208ENST00000476824 AK5Q9Y6K8 562 aa6.34□□□□□ -1.39
ITGA4-208ENST00000476824 HMX2A2RU54 273 aa6.33□□□□□ -1.4
ITGA4-208ENST00000476824 DHX15O43143 795 aaKnown RBP6.33□□□□□ -1.4
ITGA4-208ENST00000476824 GAS2O43903 313 aaKnown RBP6.33□□□□□ -1.4
ITGA4-208ENST00000476824 AOC2O75106 756 aa6.33□□□□□ -1.4
ITGA4-208ENST00000476824 PSMD2Q13200 908 aa6.33□□□□□ -1.4
ITGA4-208ENST00000476824 UVSSAQ2YD98 709 aa6.33□□□□□ -1.4
ITGA4-208ENST00000476824 CDPF1Q6NVV7 123 aa6.33□□□□□ -1.4
ITGA4-208ENST00000476824 TRIM42Q8IWZ5 723 aa6.33□□□□□ -1.4
ITGA4-208ENST00000476824 GRIN3AQ8TCU5 1115 aa6.33□□□□□ -1.4
ITGA4-208ENST00000476824 KCNB2Q92953 911 aa6.33□□□□□ -1.4
ITGA4-208ENST00000476824 KCNF1Q9H3M0 494 aa6.33□□□□□ -1.4
ITGA4-208ENST00000476824 RAD18Q9NS91 495 aa6.33□□□□□ -1.4
ITGA4-208ENST00000476824 STOML1Q9UBI4 398 aa6.33□□□□□ -1.4
ITGA4-208ENST00000476824 PPP1R9AQ9ULJ8 1098 aa6.33□□□□□ -1.4
ITGA4-208ENST00000476824 TTF2Q9UNY4 1162 aaKnown RBP6.33□□□□□ -1.4
ITGA4-208ENST00000476824 AP4E1Q9UPM8 1137 aa6.33□□□□□ -1.4
ITGA4-208ENST00000476824 FSTP19883 344 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms