RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 SPTY2D1Q68D10 685 aaPredicted RBP34.49■■■■□ 3.11
VEGFA-211ENST00000476772 HSCBQ8IWL3 235 aa34.49■■■■□ 3.11
VEGFA-211ENST00000476772 STRBPQ96SI9 672 aaKnown RBP34.49■■■■□ 3.11
VEGFA-211ENST00000476772 DOK7Q18PE1 504 aa34.48■■■■□ 3.11
VEGFA-211ENST00000476772 MIGA1Q8NAN2 632 aa34.47■■■■□ 3.11
VEGFA-211ENST00000476772 ARMT1Q9H993 441 aa34.47■■■■□ 3.11
VEGFA-211ENST00000476772 PIM2Q9P1W9 311 aa34.47■■■■□ 3.11
VEGFA-211ENST00000476772 CCDC93Q567U6 631 aa34.47■■■■□ 3.11
VEGFA-211ENST00000476772 KLHL34Q8N239 644 aa34.47■■■■□ 3.11
VEGFA-211ENST00000476772 TAF6LQ9Y6J9 622 aa34.47■■■■□ 3.11
VEGFA-211ENST00000476772 BRCA1P38398 1863 aaKnown RBP34.46■■■■□ 3.11
VEGFA-211ENST00000476772 LDHBP07195 334 aaKnown RBP34.46■■■■□ 3.11
VEGFA-211ENST00000476772 LCORLQ8N3X6 602 aa34.46■■■■□ 3.11
VEGFA-211ENST00000476772 FAM205AQ6ZU69 1335 aa34.46■■■■□ 3.11
VEGFA-211ENST00000476772 NEK4P51957 841 aa34.45■■■■□ 3.11
VEGFA-211ENST00000476772 GRIK5Q16478 980 aa34.45■■■■□ 3.11
VEGFA-211ENST00000476772 ADCK5Q3MIX3 580 aa34.45■■■■□ 3.11
VEGFA-211ENST00000476772 UPF3BQ9BZI7 483 aaKnown RBP34.45■■■■□ 3.11
VEGFA-211ENST00000476772 CD2APQ9Y5K6 639 aa34.45■■■■□ 3.11
VEGFA-211ENST00000476772 G3V3G9 751 aa34.44■■■■□ 3.1
VEGFA-211ENST00000476772 CYP21A2P08686 494 aa34.44■■■■□ 3.1
VEGFA-211ENST00000476772 DCAF8Q5TAQ9 597 aa34.44■■■■□ 3.1
VEGFA-211ENST00000476772 DZIP1Q86YF9 867 aaKnown RBP34.44■■■■□ 3.1
VEGFA-211ENST00000476772 ST18O60284 1047 aa34.44■■■■□ 3.1
VEGFA-211ENST00000476772 GTF2IP78347 998 aa34.44■■■■□ 3.1
VEGFA-211ENST00000476772 GRIPAP1Q4V328 841 aa34.44■■■■□ 3.1
VEGFA-211ENST00000476772 TSGA10IPQ3SY00 556 aa34.43■■■■□ 3.1
VEGFA-211ENST00000476772 SUPT20HQ8NEM7 779 aa34.43■■■■□ 3.1
VEGFA-211ENST00000476772 JAKMIP1Q96N16 626 aaKnown RBP34.43■■■■□ 3.1
VEGFA-211ENST00000476772 MAGEB6P1A0A0J9YX57 407 aa34.42■■■■□ 3.1
VEGFA-211ENST00000476772 IGSF3O75054 1194 aa34.42■■■■□ 3.1
VEGFA-211ENST00000476772 FGAP02671 866 aa34.42■■■■□ 3.1
VEGFA-211ENST00000476772 MFSD14BQ5SR56 506 aa34.42■■■■□ 3.1
VEGFA-211ENST00000476772 TTLL5Q6EMB2 1281 aa34.42■■■■□ 3.1
VEGFA-211ENST00000476772 RTKN2Q8IZC4 609 aa34.42■■■■□ 3.1
VEGFA-211ENST00000476772 TBC1D22AQ8WUA7 517 aa34.42■■■■□ 3.1
VEGFA-211ENST00000476772 DBNDD1Q9H9R9 158 aa34.42■■■■□ 3.1
VEGFA-211ENST00000476772 RPAP1Q9BWH6 1393 aaPredicted RBP34.42■■■■□ 3.1
VEGFA-211ENST00000476772 TMED8Q6PL24 325 aaPredicted RBP34.41■■■■□ 3.1
VEGFA-211ENST00000476772 CASTP20810 708 aaKnown RBP34.41■■■■□ 3.1
VEGFA-211ENST00000476772 AOC3Q16853 763 aa34.41■■■■□ 3.1
VEGFA-211ENST00000476772 RIOK1Q9BRS2 568 aaKnown RBP34.41■■■■□ 3.1
VEGFA-211ENST00000476772 TM6SF1Q9BZW5 370 aa34.41■■■■□ 3.1
VEGFA-211ENST00000476772 CTNNA3Q9UI47 895 aa34.41■■■■□ 3.1
VEGFA-211ENST00000476772 APPP05067 770 aa34.4■■■■□ 3.1
VEGFA-211ENST00000476772 KIAA2012Q0VF49 1180 aa34.4■■■■□ 3.1
VEGFA-211ENST00000476772 DALRD3Q5D0E6 543 aaKnown RBP34.4■■■■□ 3.1
VEGFA-211ENST00000476772 FBXW7Q969H0 707 aa34.4■■■■□ 3.1
VEGFA-211ENST00000476772 DYNLL1P63167 89 aaKnown RBP34.39■■■■□ 3.1
VEGFA-211ENST00000476772 PODNQ7Z5L7 613 aa34.39■■■■□ 3.1
VEGFA-211ENST00000476772 PATL2C9JE40 543 aaKnown RBP34.38■■■■□ 3.09
VEGFA-211ENST00000476772 PRKAB2O43741 272 aa34.38■■■■□ 3.09
VEGFA-211ENST00000476772 GNAT2P19087 354 aa34.38■■■■□ 3.09
VEGFA-211ENST00000476772 SLC4A4Q9Y6R1 1079 aa34.38■■■■□ 3.09
VEGFA-211ENST00000476772 K7ELQ4 463 aaPredicted RBP34.38■■■■□ 3.09
VEGFA-211ENST00000476772 CPA1P15085 419 aa34.38■■■■□ 3.09
VEGFA-211ENST00000476772 KRT32Q14532 448 aa34.38■■■■□ 3.09
VEGFA-211ENST00000476772 PSMD1Q99460 953 aa34.38■■■■□ 3.09
VEGFA-211ENST00000476772 ZSWIM6Q9HCJ5 1215 aa34.38■■■■□ 3.09
VEGFA-211ENST00000476772 EPB41L4AQ9HCS5 686 aaPredicted RBP34.38■■■■□ 3.09
VEGFA-211ENST00000476772 ECE2O60344 883 aa34.37■■■■□ 3.09
VEGFA-211ENST00000476772 SOGA3Q5TF21 947 aa34.37■■■■□ 3.09
VEGFA-211ENST00000476772 SPON1Q9HCB6 807 aa34.37■■■■□ 3.09
VEGFA-211ENST00000476772 GSG1L2A8MUP6 293 aa34.36■■■■□ 3.09
VEGFA-211ENST00000476772 PPIP5K2O43314 1243 aa34.36■■■■□ 3.09
VEGFA-211ENST00000476772 PSMA5P28066 241 aa34.36■■■■□ 3.09
VEGFA-211ENST00000476772 GSTO1P78417 241 aa34.36■■■■□ 3.09
VEGFA-211ENST00000476772 IMMTQ16891 758 aaKnown RBP34.36■■■■□ 3.09
VEGFA-211ENST00000476772 DIXDC1Q155Q3 683 aa34.35■■■■□ 3.09
VEGFA-211ENST00000476772 STOX1Q6ZVD7 989 aa34.35■■■■□ 3.09
VEGFA-211ENST00000476772 IFNL3Q8IZI9 196 aa34.35■■■■□ 3.09
VEGFA-211ENST00000476772 AATFQ9NY61 560 aaKnown RBP eCLIP34.35■■■■□ 3.09
VEGFA-211ENST00000476772 COL9A3Q14050 684 aaPredicted RBP34.35■■■■□ 3.09
VEGFA-211ENST00000476772 ALX1Q15699 326 aa34.35■■■■□ 3.09
VEGFA-211ENST00000476772 TTC14Q96N46 770 aa34.35■■■■□ 3.09
VEGFA-211ENST00000476772 CYP46A1Q9Y6A2 500 aa34.35■■■■□ 3.09
VEGFA-211ENST00000476772 SCN9AQ15858 1988 aa34.34■■■■□ 3.09
VEGFA-211ENST00000476772 MYH2Q9UKX2 1941 aa34.34■■■■□ 3.09
VEGFA-211ENST00000476772 ZMYM6O95789 1325 aa34.34■■■■□ 3.09
VEGFA-211ENST00000476772 LAMA4Q16363 1823 aa34.34■■■■□ 3.09
VEGFA-211ENST00000476772 HAND2P61296 217 aa34.34■■■■□ 3.09
VEGFA-211ENST00000476772 RUFY3Q7L099 469 aa34.34■■■■□ 3.09
VEGFA-211ENST00000476772 IL27Q8NEV9 243 aa34.34■■■■□ 3.09
VEGFA-211ENST00000476772 KCNQ5Q9NR82 932 aa34.34■■■■□ 3.09
VEGFA-211ENST00000476772 CERS5Q8N5B7 392 aa34.33■■■■□ 3.09
VEGFA-211ENST00000476772 SDR42E1Q8WUS8 393 aa34.32■■■■□ 3.08
VEGFA-211ENST00000476772 MXD3Q9BW11 206 aa34.32■■■■□ 3.08
VEGFA-211ENST00000476772 NAPBQ9H115 298 aa34.32■■■■□ 3.08
VEGFA-211ENST00000476772 ZNF646O15015 1829 aaPredicted RBP34.32■■■■□ 3.08
VEGFA-211ENST00000476772 MROH7-TTC4A0A0A0MT08 1334 aa34.32■■■■□ 3.08
VEGFA-211ENST00000476772 BLOC1S2Q6QNY1 142 aa34.31■■■■□ 3.08
VEGFA-211ENST00000476772 NEK1Q96PY6 1258 aa34.31■■■■□ 3.08
VEGFA-211ENST00000476772 E7EWF7 191 aa34.31■■■■□ 3.08
VEGFA-211ENST00000476772 ZNF213O14771 459 aa34.31■■■■□ 3.08
VEGFA-211ENST00000476772 NLGN2Q8NFZ4 835 aa34.31■■■■□ 3.08
VEGFA-211ENST00000476772 NACAP1Q9BZK3 213 aa34.31■■■■□ 3.08
VEGFA-211ENST00000476772 ZNF277Q9NRM2 450 aaPredicted RBP34.31■■■■□ 3.08
VEGFA-211ENST00000476772 SUGT1Q9Y2Z0 365 aa34.31■■■■□ 3.08
VEGFA-211ENST00000476772 LDHCP07864 332 aa34.3■■■■□ 3.08
VEGFA-211ENST00000476772 PDRG1Q9NUG6 133 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms