RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 RASA3Q14644 834 aa13.21□□□□□ -0.29
PGK1-203ENST00000476531 BEND3Q5T5X7 828 aa13.21□□□□□ -0.29
PGK1-203ENST00000476531 ATF7IPQ6VMQ6 1270 aa13.21□□□□□ -0.29
PGK1-203ENST00000476531 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.21□□□□□ -0.29
PGK1-203ENST00000476531 ZNF594Q96JF6 807 aaPredicted RBP13.21□□□□□ -0.29
PGK1-203ENST00000476531 PTPN18Q99952 460 aa13.21□□□□□ -0.29
PGK1-203ENST00000476531 PTPN22Q9Y2R2 807 aa13.21□□□□□ -0.29
PGK1-203ENST00000476531 FAM205AQ6ZU69 1335 aa13.2□□□□□ -0.3
PGK1-203ENST00000476531 IREB2P48200 963 aaKnown RBP13.2□□□□□ -0.3
PGK1-203ENST00000476531 INTS3Q68E01 1043 aaKnown RBP13.2□□□□□ -0.3
PGK1-203ENST00000476531 LMBR1LQ6UX01 489 aa13.2□□□□□ -0.3
PGK1-203ENST00000476531 TMEM57Q8N5G2 664 aa13.2□□□□□ -0.3
PGK1-203ENST00000476531 CD99L2Q8TCZ2 262 aa13.2□□□□□ -0.3
PGK1-203ENST00000476531 ERO1AQ96HE7 468 aa13.2□□□□□ -0.3
PGK1-203ENST00000476531 COG6Q9Y2V7 657 aa13.2□□□□□ -0.3
PGK1-203ENST00000476531 CHMP3Q9Y3E7 222 aa13.2□□□□□ -0.3
PGK1-203ENST00000476531 CACNA1FO60840 1977 aa13.2□□□□□ -0.3
PGK1-203ENST00000476531 SPDYE2Q495Y8 402 aa13.19□□□□□ -0.3
PGK1-203ENST00000476531 PPP4R3CPQ6ZMV5 832 aa13.19□□□□□ -0.3
PGK1-203ENST00000476531 CDAN1Q8IWY9 1227 aa13.19□□□□□ -0.3
PGK1-203ENST00000476531 DZIP1LQ8IYY4 767 aaKnown RBP13.19□□□□□ -0.3
PGK1-203ENST00000476531 ANKRD13AQ8IZ07 590 aa13.19□□□□□ -0.3
PGK1-203ENST00000476531 TDRD7Q8NHU6 1098 aaKnown RBP13.19□□□□□ -0.3
PGK1-203ENST00000476531 ZNF70Q9UC06 446 aaPredicted RBP13.19□□□□□ -0.3
PGK1-203ENST00000476531 CENPFP49454 3210 aa13.19□□□□□ -0.3
PGK1-203ENST00000476531 OTOFQ9HC10 1997 aa13.18□□□□□ -0.3
PGK1-203ENST00000476531 RBM5P52756 815 aaKnown RBP eCLIP13.18□□□□□ -0.36e-8■■□□□ 12
PGK1-203ENST00000476531 PDE3AQ14432 1141 aa13.18□□□□□ -0.3
PGK1-203ENST00000476531 OTUD7BQ6GQQ9 843 aa13.18□□□□□ -0.3
PGK1-203ENST00000476531 LDHAL6AQ6ZMR3 332 aa13.18□□□□□ -0.3
PGK1-203ENST00000476531 ARMC5Q96C12 935 aa13.18□□□□□ -0.3
PGK1-203ENST00000476531 MS4A4AQ96JQ5 239 aa13.18□□□□□ -0.3
PGK1-203ENST00000476531 TEPSINQ96N21 525 aa13.18□□□□□ -0.3
PGK1-203ENST00000476531 ELP3Q9H9T3 547 aa13.18□□□□□ -0.3
PGK1-203ENST00000476531 HTTP42858 3142 aa13.17□□□□□ -0.3
PGK1-203ENST00000476531 GRM8O00222 908 aa13.17□□□□□ -0.3
PGK1-203ENST00000476531 IPO8O15397 1037 aaKnown RBP13.17□□□□□ -0.3
PGK1-203ENST00000476531 GYG1P46976 350 aa13.17□□□□□ -0.3
PGK1-203ENST00000476531 SP3Q02447 781 aa13.17□□□□□ -0.3
PGK1-203ENST00000476531 CCDC57Q2TAC2 916 aa13.17□□□□□ -0.3
PGK1-203ENST00000476531 MFSD14BQ5SR56 506 aa13.17□□□□□ -0.3
PGK1-203ENST00000476531 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.17□□□□□ -0.3
PGK1-203ENST00000476531 FTSJ3Q8IY81 847 aaKnown RBP13.17□□□□□ -0.3
PGK1-203ENST00000476531 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
PGK1-203ENST00000476531 ARHGAP45Q92619 1136 aa13.17□□□□□ -0.3
PGK1-203ENST00000476531 OPTNQ96CV9 577 aa13.17□□□□□ -0.3
PGK1-203ENST00000476531 FAM84BQ96KN1 310 aaPredicted RBP13.17□□□□□ -0.3
PGK1-203ENST00000476531 API5Q9BZZ5 524 aaKnown RBP13.17□□□□□ -0.3
PGK1-203ENST00000476531 TDRD3Q9H7E2 651 aaKnown RBP13.17□□□□□ -0.3
PGK1-203ENST00000476531 EFCC1Q9HA90 598 aa13.17□□□□□ -0.3
PGK1-203ENST00000476531 CNNM1Q9NRU3 951 aa13.17□□□□□ -0.3
PGK1-203ENST00000476531 SERPINA10Q9UK55 444 aa13.17□□□□□ -0.3
PGK1-203ENST00000476531 RBBP6Q7Z6E9 1792 aaKnown RBP13.17□□□□□ -0.3
PGK1-203ENST00000476531 PTPRCP08575 1304 aa13.16□□□□□ -0.3
PGK1-203ENST00000476531 HIBADHP31937 336 aaKnown RBP13.16□□□□□ -0.3
PGK1-203ENST00000476531 TNFAIP1Q13829 316 aa13.16□□□□□ -0.3
PGK1-203ENST00000476531 UBE4AQ14139 1066 aa13.16□□□□□ -0.3
PGK1-203ENST00000476531 TAF7LQ5H9L4 462 aa13.16□□□□□ -0.3
PGK1-203ENST00000476531 BRI3BPQ8WY22 251 aa13.16□□□□□ -0.3
PGK1-203ENST00000476531 PUS3Q9BZE2 481 aaKnown RBP13.16□□□□□ -0.3
PGK1-203ENST00000476531 TTF2Q9UNY4 1162 aaKnown RBP13.16□□□□□ -0.3
PGK1-203ENST00000476531 EN2P19622 333 aaPredicted RBP13.15□□□□□ -0.3
PGK1-203ENST00000476531 CRKP46108 304 aa13.15□□□□□ -0.3
PGK1-203ENST00000476531 VGLL4Q14135 290 aa13.15□□□□□ -0.3
PGK1-203ENST00000476531 MVPQ14764 893 aaKnown RBP13.15□□□□□ -0.3
PGK1-203ENST00000476531 GRIK5Q16478 980 aa13.15□□□□□ -0.3
PGK1-203ENST00000476531 ITPRIPQ8IWB1 547 aa13.15□□□□□ -0.3
PGK1-203ENST00000476531 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.15□□□□□ -0.32e-65■□□□□ 8.4
PGK1-203ENST00000476531 KAZALD1Q96I82 304 aa13.15□□□□□ -0.3
PGK1-203ENST00000476531 ARAP2Q8WZ64 1704 aa13.15□□□□□ -0.3
PGK1-203ENST00000476531 TCP10L2B9ZVM9 353 aa13.14□□□□□ -0.31
PGK1-203ENST00000476531 ALDH1L1O75891 902 aa13.14□□□□□ -0.31
PGK1-203ENST00000476531 SLC4A10Q6U841 1118 aa13.14□□□□□ -0.31
PGK1-203ENST00000476531 SUCLG2Q96I99 432 aa13.14□□□□□ -0.31
PGK1-203ENST00000476531 ZNF333Q96JL9 665 aa13.14□□□□□ -0.31
PGK1-203ENST00000476531 TMEM39BQ9GZU3 492 aa13.14□□□□□ -0.31
PGK1-203ENST00000476531 BRCA2P51587 3418 aa13.13□□□□□ -0.31
PGK1-203ENST00000476531 CCL15-CCL14A0A0B4J2E2 113 aa13.13□□□□□ -0.31
PGK1-203ENST00000476531 FXR1P51114 621 aaKnown RBP eCLIP13.13□□□□□ -0.316e-11■■□□□ 12.1
PGK1-203ENST00000476531 GTF2A2P52657 109 aa13.13□□□□□ -0.31
PGK1-203ENST00000476531 MAP3K9P80192 1104 aa13.13□□□□□ -0.31
PGK1-203ENST00000476531 CCL15Q16663 113 aa13.13□□□□□ -0.31
PGK1-203ENST00000476531 FBXO33Q7Z6M2 555 aa13.13□□□□□ -0.31
PGK1-203ENST00000476531 FAM43AQ8N2R8 423 aa13.13□□□□□ -0.31
PGK1-203ENST00000476531 C9orf78Q9NZ63 289 aaPredicted RBP13.13□□□□□ -0.31
PGK1-203ENST00000476531 RIPOR2Q9Y4F9 1068 aa13.13□□□□□ -0.31
PGK1-203ENST00000476531 KIAA0100Q14667 2235 aaKnown RBP13.12□□□□□ -0.31
PGK1-203ENST00000476531 TAF1CQ15572 869 aaPredicted RBP13.12□□□□□ -0.31
PGK1-203ENST00000476531 OTUD5Q96G74 571 aa13.12□□□□□ -0.31
PGK1-203ENST00000476531 SRCIN1Q9C0H9 1055 aa13.12□□□□□ -0.31
PGK1-203ENST00000476531 ZFYVE28Q9HCC9 887 aa13.12□□□□□ -0.31
PGK1-203ENST00000476531 PTCH2Q9Y6C5 1203 aa13.12□□□□□ -0.31
PGK1-203ENST00000476531 SNCAIPQ9Y6H5 919 aa13.12□□□□□ -0.31
PGK1-203ENST00000476531 SPDYE5A6NIY4 337 aa13.11□□□□□ -0.31
PGK1-203ENST00000476531 NBPF7P0C2Y1 421 aaPredicted RBP13.11□□□□□ -0.31
PGK1-203ENST00000476531 TNNI2P48788 182 aa13.11□□□□□ -0.31
PGK1-203ENST00000476531 CACNB3P54284 484 aa13.11□□□□□ -0.31
PGK1-203ENST00000476531 HDLBPQ00341 1268 aaKnown RBP13.11□□□□□ -0.31
PGK1-203ENST00000476531 B4GALNT3Q6L9W6 998 aa13.11□□□□□ -0.31
PGK1-203ENST00000476531 IQSEC3Q9UPP2 1182 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms