RNA–Protein interactions for RNA: ENST00000475422.5

ITSN1-227, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 798 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-227ENST00000475422 KLHDC4Q8TBB5 520 aa19.79■□□□□ 0.76
ITSN1-227ENST00000475422 TBC1D22AQ8WUA7 517 aa19.79■□□□□ 0.76
ITSN1-227ENST00000475422 R3HDMLQ9H3Y0 253 aa19.79■□□□□ 0.76
ITSN1-227ENST00000475422 TCP10L2B9ZVM9 353 aa19.78■□□□□ 0.76
ITSN1-227ENST00000475422 SLFN5Q08AF3 891 aa19.78■□□□□ 0.76
ITSN1-227ENST00000475422 OTUD7BQ6GQQ9 843 aa19.78■□□□□ 0.76
ITSN1-227ENST00000475422 USP44Q9H0E7 712 aa19.78■□□□□ 0.76
ITSN1-227ENST00000475422 FBXO46Q6PJ61 603 aaPredicted RBP19.77■□□□□ 0.76
ITSN1-227ENST00000475422 IFIT1P09914 478 aaKnown RBP19.76■□□□□ 0.75
ITSN1-227ENST00000475422 BCAMP50895 628 aa19.76■□□□□ 0.75
ITSN1-227ENST00000475422 GRIK5Q16478 980 aa19.76■□□□□ 0.75
ITSN1-227ENST00000475422 VGLL2Q8N8G2 317 aa19.76■□□□□ 0.75
ITSN1-227ENST00000475422 TEKT1Q969V4 418 aa19.76■□□□□ 0.75
ITSN1-227ENST00000475422 ELP3Q9H9T3 547 aa19.76■□□□□ 0.75
ITSN1-227ENST00000475422 SMC4Q9NTJ3 1288 aa19.76■□□□□ 0.75
ITSN1-227ENST00000475422 IGF2BP3O00425 579 aaKnown RBP eCLIP19.75■□□□□ 0.75
ITSN1-227ENST00000475422 HDLBPQ00341 1268 aaKnown RBP19.75■□□□□ 0.75
ITSN1-227ENST00000475422 PUM3Q15397 648 aaKnown RBP19.75■□□□□ 0.75
ITSN1-227ENST00000475422 ALDH1L2Q3SY69 923 aa19.75■□□□□ 0.75
ITSN1-227ENST00000475422 OPTNQ96CV9 577 aa19.75■□□□□ 0.75
ITSN1-227ENST00000475422 TMEM39BQ9GZU3 492 aa19.75■□□□□ 0.75
ITSN1-227ENST00000475422 TNRC18O15417 2968 aaPredicted RBP19.75■□□□□ 0.75
ITSN1-227ENST00000475422 GJA5P36382 358 aa19.74■□□□□ 0.75
ITSN1-227ENST00000475422 CDAN1Q8IWY9 1227 aa19.74■□□□□ 0.75
ITSN1-227ENST00000475422 TEPSINQ96N21 525 aa19.74■□□□□ 0.75
ITSN1-227ENST00000475422 TMOD2Q9NZR1 351 aa19.74■□□□□ 0.75
ITSN1-227ENST00000475422 EYA2O00167 538 aa19.73■□□□□ 0.75
ITSN1-227ENST00000475422 CDCA7LQ96GN5 454 aa19.73■□□□□ 0.75
ITSN1-227ENST00000475422 TRIM17Q9Y577 477 aa19.73■□□□□ 0.75
ITSN1-227ENST00000475422 MAST3O60307 1309 aa19.73■□□□□ 0.75
ITSN1-227ENST00000475422 LAMB1P07942 1786 aa19.72■□□□□ 0.75
ITSN1-227ENST00000475422 OTOFQ9HC10 1997 aa19.72■□□□□ 0.75
ITSN1-227ENST00000475422 SLC5A1P13866 664 aa19.72■□□□□ 0.75
ITSN1-227ENST00000475422 CACNB3P54284 484 aa19.72■□□□□ 0.75
ITSN1-227ENST00000475422 CSADQ9Y600 493 aa19.72■□□□□ 0.75
ITSN1-227ENST00000475422 KIF16BQ96L93 1317 aa19.72■□□□□ 0.75
ITSN1-227ENST00000475422 UBTFL1P0CB47 393 aaPredicted RBP19.71■□□□□ 0.75
ITSN1-227ENST00000475422 FGFR2P21802 821 aa19.71■□□□□ 0.75
ITSN1-227ENST00000475422 MAP3K9P80192 1104 aa19.71■□□□□ 0.75
ITSN1-227ENST00000475422 CRHR2Q13324 411 aa19.71■□□□□ 0.75
ITSN1-227ENST00000475422 VGLL4Q14135 290 aa19.71■□□□□ 0.75
ITSN1-227ENST00000475422 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.71■□□□□ 0.75
ITSN1-227ENST00000475422 LPIN2Q92539 896 aa19.71■□□□□ 0.75
ITSN1-227ENST00000475422 ERO1AQ96HE7 468 aa19.71■□□□□ 0.75
ITSN1-227ENST00000475422 ZDHHC15Q96MV8 337 aa19.71■□□□□ 0.75
ITSN1-227ENST00000475422 SUGT1Q9Y2Z0 365 aa19.71■□□□□ 0.75
ITSN1-227ENST00000475422 TESPA1A2RU30 521 aaPredicted RBP19.7■□□□□ 0.74
ITSN1-227ENST00000475422 OTOP1Q7RTM1 612 aa19.7■□□□□ 0.74
ITSN1-227ENST00000475422 PTPN18Q99952 460 aa19.7■□□□□ 0.74
ITSN1-227ENST00000475422 MRIQ9BWK5 157 aa19.7■□□□□ 0.74
ITSN1-227ENST00000475422 SIL1Q9H173 461 aa19.7■□□□□ 0.74
ITSN1-227ENST00000475422 RFX5P48382 616 aaPredicted RBP19.69■□□□□ 0.74
ITSN1-227ENST00000475422 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.69■□□□□ 0.74
ITSN1-227ENST00000475422 WDR66Q8TBY9 1149 aa19.69■□□□□ 0.74
ITSN1-227ENST00000475422 CD99L2Q8TCZ2 262 aa19.69■□□□□ 0.74
ITSN1-227ENST00000475422 CNKSR2Q8WXI2 1034 aa19.69■□□□□ 0.74
ITSN1-227ENST00000475422 HOOK2Q96ED9 719 aa19.69■□□□□ 0.74
ITSN1-227ENST00000475422 OTUD5Q96G74 571 aa19.69■□□□□ 0.74
ITSN1-227ENST00000475422 MYH13Q9UKX3 1938 aa19.68■□□□□ 0.74
ITSN1-227ENST00000475422 GTF2A2P52657 109 aa19.68■□□□□ 0.74
ITSN1-227ENST00000475422 APOBEC3HQ6NTF7 200 aaKnown RBP19.68■□□□□ 0.74
ITSN1-227ENST00000475422 FAM83AQ86UY5 434 aa19.68■□□□□ 0.74
ITSN1-227ENST00000475422 NOB1Q9ULX3 412 aaKnown RBP19.68■□□□□ 0.74
ITSN1-227ENST00000475422 PDE4DIPQ5VU43 2346 aa19.68■□□□□ 0.74
ITSN1-227ENST00000475422 CCL15-CCL14A0A0B4J2E2 113 aa19.67■□□□□ 0.74
ITSN1-227ENST00000475422 CT47B1P0C2W7 299 aaPredicted RBP19.67■□□□□ 0.74
ITSN1-227ENST00000475422 SP3Q02447 781 aa19.67■□□□□ 0.74
ITSN1-227ENST00000475422 CCL15Q16663 113 aa19.67■□□□□ 0.74
ITSN1-227ENST00000475422 FKBP1CQ5VVH2 108 aa19.67■□□□□ 0.74
ITSN1-227ENST00000475422 HHIPL2Q6UWX4 724 aa19.67■□□□□ 0.74
ITSN1-227ENST00000475422 ATG9AQ7Z3C6 839 aa19.67■□□□□ 0.74
ITSN1-227ENST00000475422 MS4A4AQ96JQ5 239 aa19.67■□□□□ 0.74
ITSN1-227ENST00000475422 WRNIP1Q96S55 665 aa19.67■□□□□ 0.74
ITSN1-227ENST00000475422 API5Q9BZZ5 524 aaKnown RBP19.67■□□□□ 0.74
ITSN1-227ENST00000475422 GNL3LQ9NVN8 582 aaKnown RBP19.67■□□□□ 0.74
ITSN1-227ENST00000475422 CEP126Q9P2H0 1117 aa19.67■□□□□ 0.74
ITSN1-227ENST00000475422 HDAC5Q9UQL6 1122 aa19.67■□□□□ 0.74
ITSN1-227ENST00000475422 WDHD1O75717 1129 aaPredicted RBP19.66■□□□□ 0.74
ITSN1-227ENST00000475422 SLC34A2O95436 690 aa19.66■□□□□ 0.74
ITSN1-227ENST00000475422 ATP2B3Q16720 1220 aa19.66■□□□□ 0.74
ITSN1-227ENST00000475422 BRI3BPQ8WY22 251 aa19.66■□□□□ 0.74
ITSN1-227ENST00000475422 EFCC1Q9HA90 598 aa19.66■□□□□ 0.74
ITSN1-227ENST00000475422 FBXO3Q9UK99 471 aa19.66■□□□□ 0.74
ITSN1-227ENST00000475422 CIAO1O76071 339 aa19.65■□□□□ 0.74
ITSN1-227ENST00000475422 TAF1CQ15572 869 aaPredicted RBP19.65■□□□□ 0.74
ITSN1-227ENST00000475422 DCAF15Q66K64 600 aa19.65■□□□□ 0.74
ITSN1-227ENST00000475422 TRMT2AQ8IZ69 625 aaKnown RBP19.65■□□□□ 0.74
ITSN1-227ENST00000475422 ZFYVE28Q9HCC9 887 aa19.65■□□□□ 0.74
ITSN1-227ENST00000475422 SPDYE5A6NIY4 337 aa19.64■□□□□ 0.73
ITSN1-227ENST00000475422 INTS3Q68E01 1043 aaKnown RBP19.64■□□□□ 0.73
ITSN1-227ENST00000475422 ERO1BQ86YB8 467 aa19.64■□□□□ 0.73
ITSN1-227ENST00000475422 ZKSCAN4Q969J2 545 aaPredicted RBP19.64■□□□□ 0.73
ITSN1-227ENST00000475422 PTPN22Q9Y2R2 807 aa19.64■□□□□ 0.73
ITSN1-227ENST00000475422 LRRFIP2Q9Y608 721 aaKnown RBP19.64■□□□□ 0.73
ITSN1-227ENST00000475422 IL15P40933 162 aaPredicted RBP19.63■□□□□ 0.73
ITSN1-227ENST00000475422 ARHGEF6Q15052 776 aa19.63■□□□□ 0.73
ITSN1-227ENST00000475422 SNCAIPQ9Y6H5 919 aa19.63■□□□□ 0.73
ITSN1-227ENST00000475422 LDHBP07195 334 aaKnown RBP19.62■□□□□ 0.73
ITSN1-227ENST00000475422 CETPP11597 493 aa19.62■□□□□ 0.73
ITSN1-227ENST00000475422 TCP10Q12799 353 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms