RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 KRT86O43790 486 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 CCNT1O60563 726 aaKnown RBP12.37□□□□□ -0.43
VAPB-204ENST00000475243 DTNBO60941 627 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 PARP1P09874 1014 aaKnown RBP12.37□□□□□ -0.43
VAPB-204ENST00000475243 RLBP1P12271 317 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 CCDC24Q8N4L8 307 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 LINS1Q8NG48 757 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 BIN2Q9UBW5 565 aaPredicted RBP12.37□□□□□ -0.43
VAPB-204ENST00000475243 MAP3K1Q13233 1512 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 SPAG1Q07617 926 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 DHX32Q7L7V1 743 aaKnown RBP12.37□□□□□ -0.43
VAPB-204ENST00000475243 PHACTR3Q96KR7 559 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 DYNC1I1O14576 645 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 MAK16Q9BXY0 300 aaKnown RBP12.37□□□□□ -0.43
VAPB-204ENST00000475243 ZNF408Q9H9D4 720 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 BICDL2A1A5D9 508 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 ZEB2O60315 1214 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 KRT9P35527 623 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 ABCA10Q8WWZ4 1543 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 PLCG2P16885 1265 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 KRT83P78385 493 aa12.37□□□□□ -0.43
VAPB-204ENST00000475243 TXNDC16Q9P2K2 825 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 ATP6V0A2Q9Y487 856 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 PRPHP41219 470 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 MNAT1P51948 309 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 RNASE9P60153 205 aaKnown RBP12.36□□□□□ -0.43
VAPB-204ENST00000475243 PPP1R7Q15435 360 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.36□□□□□ -0.43
VAPB-204ENST00000475243 BTG4Q9NY30 223 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 CTNND2Q9UQB3 1225 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 KCNK9Q9NPC2 374 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 GINS2Q9Y248 185 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 HSPA4P34932 840 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 ZNF594Q96JF6 807 aaPredicted RBP12.36□□□□□ -0.43
VAPB-204ENST00000475243 TEX11Q8IYF3 940 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 LMBR1Q8WVP7 490 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 DDX12PQ92771 950 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 ITSN2Q9NZM3 1697 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 VAMP4O75379 141 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 PRIMPOLQ96LW4 560 aa12.36□□□□□ -0.43
VAPB-204ENST00000475243 FAM170AA1A519 330 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 ERCC3P19447 782 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 IRX5P78411 483 aaPredicted RBP12.35□□□□□ -0.43
VAPB-204ENST00000475243 KLHDC4Q8TBB5 520 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 FRMD4BQ9Y2L6 1034 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 TRAPPC3LQ5T215 181 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 GOLGA1Q92805 767 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 LAMC3Q9Y6N6 1575 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 CCDC160A6NGH7 325 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 ATP2A1O14983 1001 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 POLD1P28340 1107 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 PPARDQ03181 441 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 EYA1Q99502 592 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 ARMT1Q9H993 441 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 DNAJC5BQ9UF47 199 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 TTC41PQ6P2S7 1318 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 MAP3K5Q99683 1374 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 ABCC1P33527 1531 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 CCDC169A6NNP5 214 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 PLEKHM2Q8IWE5 1019 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 GCP02774 474 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 HSPA2P54652 639 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 CCDC77Q9BR77 488 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 B4DLN1 442 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 TRAF5O00463 557 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 MRPL12P52815 198 aaKnown RBP12.35□□□□□ -0.43
VAPB-204ENST00000475243 UAP1Q16222 522 aaPredicted RBP12.35□□□□□ -0.43
VAPB-204ENST00000475243 SYT10Q6XYQ8 523 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 PLCH2O75038 1416 aa12.35□□□□□ -0.43
VAPB-204ENST00000475243 DDX39AO00148 427 aaKnown RBP12.34□□□□□ -0.43
VAPB-204ENST00000475243 KRT222Q8N1A0 295 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 NSRP1Q9H0G5 558 aaKnown RBP12.34□□□□□ -0.43
VAPB-204ENST00000475243 VPS16Q9H269 839 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 A0A1B0GUL7 405 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 RNMTO43148 476 aaKnown RBP12.34□□□□□ -0.43
VAPB-204ENST00000475243 CHMLP26374 656 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 GPIHBP1Q8IV16 184 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 FNBP4Q8N3X1 1017 aaPredicted RBP12.34□□□□□ -0.43
VAPB-204ENST00000475243 ITGA6P23229 1130 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 BIRC3Q13489 604 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 CCDC65Q8IXS2 484 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 MRRFQ96E11 262 aaKnown RBP12.34□□□□□ -0.43
VAPB-204ENST00000475243 ANKRD2Q9GZV1 360 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 AGTPBP1Q9UPW5 1226 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 RIMS2Q9UQ26 1411 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 UFL1O94874 794 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 XRCC6P12956 609 aaKnown RBP eCLIP12.34□□□□□ -0.43
VAPB-204ENST00000475243 VPS18Q9P253 973 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 PRKG1Q13976 671 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 RASA3Q14644 834 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 AATFQ9NY61 560 aaKnown RBP eCLIP12.34□□□□□ -0.43
VAPB-204ENST00000475243 ODF2LQ9ULJ1 636 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 NDUFB9Q9Y6M9 179 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 UHRF1BP1LA0JNW5 1464 aa12.34□□□□□ -0.43
VAPB-204ENST00000475243 TAF5LO75529 589 aa12.33□□□□□ -0.43
VAPB-204ENST00000475243 SV2BQ7L1I2 683 aa12.33□□□□□ -0.43
VAPB-204ENST00000475243 G2E3Q7L622 706 aa12.33□□□□□ -0.43
VAPB-204ENST00000475243 UBLCP1Q8WVY7 318 aaPredicted RBP12.33□□□□□ -0.43
VAPB-204ENST00000475243 SEC24BO95487 1268 aa12.33□□□□□ -0.44
VAPB-204ENST00000475243 IQUBQ8NA54 791 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms