RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 NMIQ13287 307 aaPredicted RBP7.99□□□□□ -1.13
ATG4A-207ENST00000474825 RASGRF1Q13972 1273 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 LRRFIP1Q32MZ4 808 aaKnown RBP7.99□□□□□ -1.13
ATG4A-207ENST00000474825 ZMYM1Q5SVZ6 1142 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 TMED8Q6PL24 325 aaPredicted RBP7.99□□□□□ -1.13
ATG4A-207ENST00000474825 C10orf71Q711Q0 1435 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 FBXO22Q8NEZ5 403 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 C7orf43Q8WVR3 580 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 MAP4K1Q92918 833 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 RNF25Q96BH1 459 aaPredicted RBP7.99□□□□□ -1.13
ATG4A-207ENST00000474825 FAM227BQ96M60 508 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 DNAJC2Q99543 621 aaKnown RBP7.99□□□□□ -1.13
ATG4A-207ENST00000474825 SYT17Q9BSW7 474 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 FSD1Q9BTV5 496 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 ANTXR1Q9H6X2 564 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 DIAPH3Q9NSV4 1193 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 PCDHGA4Q9Y5G9 962 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 AKAP11Q9UKA4 1901 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 A0A1B0GUL6 1792 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 LRRC37AA6NMS7 1700 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 SNED1Q8TER0 1413 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 A0A0D9SFI3 127 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 TCRBV5S4A2TA0A5A2 114 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 C2orf72A6NCS6 295 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 WTIPA6NIX2 430 aaPredicted RBP7.98□□□□□ -1.13
ATG4A-207ENST00000474825 RNF113AO15541 343 aaKnown RBP7.98□□□□□ -1.13
ATG4A-207ENST00000474825 RGS20O76081 388 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 HSPA4P34932 840 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 BCAMP50895 628 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 NECTIN1Q15223 517 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 UBE3CQ15386 1083 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 MCMDC2Q4G0Z9 681 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 CAVIN4Q5BKX8 364 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 MSL1Q68DK7 614 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 CWC27Q6UX04 472 aaKnown RBP7.98□□□□□ -1.13
ATG4A-207ENST00000474825 SPATA5Q8NB90 893 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 SNX21Q969T3 373 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 DDRGK1Q96HY6 314 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 IPO9Q96P70 1041 aaKnown RBP7.98□□□□□ -1.13
ATG4A-207ENST00000474825 FHDC1Q9C0D6 1143 aaPredicted RBP7.98□□□□□ -1.13
ATG4A-207ENST00000474825 NDUFB9Q9Y6M9 179 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 LTBP1Q14766 1721 aa7.98□□□□□ -1.13
ATG4A-207ENST00000474825 PPEF1O14829 653 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-207ENST00000474825 HRO43593 1189 aa7.97□□□□□ -1.13
ATG4A-207ENST00000474825 HIBADHP31937 336 aaKnown RBP7.97□□□□□ -1.13
ATG4A-207ENST00000474825 ADD2P35612 726 aa7.97□□□□□ -1.13
ATG4A-207ENST00000474825 GPSM2P81274 684 aa7.97□□□□□ -1.13
ATG4A-207ENST00000474825 FKBP4Q02790 459 aaKnown RBP eCLIP7.97□□□□□ -1.13
ATG4A-207ENST00000474825 TSGA10IPQ3SY00 556 aa7.97□□□□□ -1.13
ATG4A-207ENST00000474825 ZSCAN25Q6NSZ9 544 aa7.97□□□□□ -1.13
ATG4A-207ENST00000474825 PI16Q6UXB8 463 aa7.97□□□□□ -1.13
ATG4A-207ENST00000474825 TDRD7Q8NHU6 1098 aaKnown RBP7.97□□□□□ -1.13
ATG4A-207ENST00000474825 TBC1D16Q8TBP0 767 aa7.97□□□□□ -1.13
ATG4A-207ENST00000474825 APPBP2Q92624 585 aa7.97□□□□□ -1.13
ATG4A-207ENST00000474825 RTFDC1Q9BY42 306 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-207ENST00000474825 PIH1D3Q9NQM4 214 aaKnown RBP7.97□□□□□ -1.13
ATG4A-207ENST00000474825 GNL3LQ9NVN8 582 aaKnown RBP7.97□□□□□ -1.13
ATG4A-207ENST00000474825 DENND2AQ9ULE3 1009 aa7.97□□□□□ -1.13
ATG4A-207ENST00000474825 CCDC171Q6TFL3 1326 aa7.97□□□□□ -1.13
ATG4A-207ENST00000474825 SALL1Q9NSC2 1324 aa7.97□□□□□ -1.13
ATG4A-207ENST00000474825 TAF1P21675 1872 aa7.96□□□□□ -1.13
ATG4A-207ENST00000474825 COL1A1P02452 1464 aaPredicted RBP7.96□□□□□ -1.13
ATG4A-207ENST00000474825 H0YIN7 160 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 CHGBP05060 677 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 IL1R1P14778 569 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 KCNA3P22001 575 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 KLRK1P26718 216 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 GYG1P46976 350 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 PTH1RQ03431 593 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 RABEP1Q15276 862 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 GRIPAP1Q4V328 841 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 CC2D2BQ6DHV5 1058 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 ZNF589Q86UQ0 364 aaPredicted RBP7.96□□□□□ -1.14
ATG4A-207ENST00000474825 TXNRD3Q86VQ6 643 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 C2CD5Q86YS7 1000 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 CNKSR1Q969H4 720 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 OSBP2Q969R2 916 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 DSCC1Q9BVC3 393 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.96□□□□□ -1.14
ATG4A-207ENST00000474825 ANO2Q9NQ90 1003 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 POLLQ9UGP5 575 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 GGA1Q9UJY5 639 aa7.96□□□□□ -1.14
ATG4A-207ENST00000474825 COL11A2P13942 1736 aaPredicted RBP7.95□□□□□ -1.14
ATG4A-207ENST00000474825 FOXP2O15409 715 aa7.95□□□□□ -1.14
ATG4A-207ENST00000474825 PDE6AP16499 860 aa7.95□□□□□ -1.14
ATG4A-207ENST00000474825 MCCP23508 829 aa7.95□□□□□ -1.14
ATG4A-207ENST00000474825 KCNJ4P48050 445 aa7.95□□□□□ -1.14
ATG4A-207ENST00000474825 TGFB2P61812 414 aa7.95□□□□□ -1.14
ATG4A-207ENST00000474825 GPR162Q16538 588 aa7.95□□□□□ -1.14
ATG4A-207ENST00000474825 KIAA1211Q6ZU35 1233 aa7.95□□□□□ -1.14
ATG4A-207ENST00000474825 SLC51AQ86UW1 340 aa7.95□□□□□ -1.14
ATG4A-207ENST00000474825 SEC62Q99442 399 aaKnown RBP7.95□□□□□ -1.14
ATG4A-207ENST00000474825 TM6SF1Q9BZW5 370 aa7.95□□□□□ -1.14
ATG4A-207ENST00000474825 ANKIB1Q9P2G1 1089 aa7.95□□□□□ -1.14
ATG4A-207ENST00000474825 DUOX1Q9NRD9 1551 aa7.95□□□□□ -1.14
ATG4A-207ENST00000474825 MAST3O60307 1309 aa7.95□□□□□ -1.14
ATG4A-207ENST00000474825 UFL1O94874 794 aa7.94□□□□□ -1.14
ATG4A-207ENST00000474825 MAP3K12Q12852 859 aa7.94□□□□□ -1.14
ATG4A-207ENST00000474825 ALX1Q15699 326 aa7.94□□□□□ -1.14
ATG4A-207ENST00000474825 SLC9C2Q5TAH2 1124 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms