RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 TIAM2Q8IVF5 1701 aa25.61■■□□□ 1.69
CCM2-206ENST00000474617 UBR3Q6ZT12 1888 aa25.61■■□□□ 1.69
CCM2-206ENST00000474617 MBD4O95243 580 aa25.59■■□□□ 1.69
CCM2-206ENST00000474617 APOBRQ0VD83 1088 aa25.59■■□□□ 1.69
CCM2-206ENST00000474617 FAM182BQ5T319 152 aa25.59■■□□□ 1.69
CCM2-206ENST00000474617 IFNL3Q8IZI9 196 aa25.59■■□□□ 1.69
CCM2-206ENST00000474617 NSUN7Q8NE18 718 aaKnown RBP25.59■■□□□ 1.69
CCM2-206ENST00000474617 KRT23Q9C075 422 aa25.59■■□□□ 1.69
CCM2-206ENST00000474617 RNF41Q9H4P4 317 aaPredicted RBP25.59■■□□□ 1.69
CCM2-206ENST00000474617 LEMD3Q9Y2U8 911 aa25.59■■□□□ 1.69
CCM2-206ENST00000474617 MYO5AQ9Y4I1 1855 aaKnown RBP25.59■■□□□ 1.69
CCM2-206ENST00000474617 XRCC6P12956 609 aaKnown RBP eCLIP25.58■■□□□ 1.69
CCM2-206ENST00000474617 NT5C2P49902 561 aa25.58■■□□□ 1.69
CCM2-206ENST00000474617 GRAPQ13588 217 aa25.58■■□□□ 1.69
CCM2-206ENST00000474617 NFIXQ14938 502 aa25.58■■□□□ 1.69
CCM2-206ENST00000474617 GRAPLQ8TC17 118 aaPredicted RBP25.58■■□□□ 1.69
CCM2-206ENST00000474617 FAM84BQ96KN1 310 aaPredicted RBP25.58■■□□□ 1.69
CCM2-206ENST00000474617 SALL1Q9NSC2 1324 aa25.58■■□□□ 1.69
CCM2-206ENST00000474617 H3BQV1 296 aa25.58■■□□□ 1.68
CCM2-206ENST00000474617 PCP11498 1178 aaKnown RBP25.58■■□□□ 1.68
CCM2-206ENST00000474617 TM4SF1P30408 202 aa25.58■■□□□ 1.68
CCM2-206ENST00000474617 HAND2P61296 217 aa25.58■■□□□ 1.68
CCM2-206ENST00000474617 IFFO2Q5TF58 517 aa25.58■■□□□ 1.68
CCM2-206ENST00000474617 GIMAP6Q6P9H5 292 aa25.58■■□□□ 1.68
CCM2-206ENST00000474617 ANGEL1Q9UNK9 670 aaKnown RBP25.58■■□□□ 1.68
CCM2-206ENST00000474617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.57■■□□□ 1.68
CCM2-206ENST00000474617 ST5P78524 1137 aa25.57■■□□□ 1.68
CCM2-206ENST00000474617 ZNF772Q68DY9 489 aaPredicted RBP25.57■■□□□ 1.68
CCM2-206ENST00000474617 PTPDC1A2A3K4 754 aa25.56■■□□□ 1.68
CCM2-206ENST00000474617 SNAP23O00161 211 aa25.56■■□□□ 1.68
CCM2-206ENST00000474617 CDKL5O76039 1030 aa25.56■■□□□ 1.68
CCM2-206ENST00000474617 HIBADHP31937 336 aaKnown RBP25.56■■□□□ 1.68
CCM2-206ENST00000474617 C15orf52Q6ZUT6 534 aaKnown RBP25.56■■□□□ 1.68
CCM2-206ENST00000474617 LRRC2Q9BYS8 371 aa25.56■■□□□ 1.68
CCM2-206ENST00000474617 LRRC4BQ9NT99 713 aa25.56■■□□□ 1.68
CCM2-206ENST00000474617 CNPY2Q9Y2B0 182 aa25.56■■□□□ 1.68
CCM2-206ENST00000474617 GSG1L2A8MUP6 293 aa25.55■■□□□ 1.68
CCM2-206ENST00000474617 GYG1P46976 350 aa25.55■■□□□ 1.68
CCM2-206ENST00000474617 SPTY2D1Q68D10 685 aaPredicted RBP25.55■■□□□ 1.68
CCM2-206ENST00000474617 CPLX2Q6PUV4 134 aaKnown RBP25.55■■□□□ 1.68
CCM2-206ENST00000474617 LRSAM1Q6UWE0 723 aa25.55■■□□□ 1.68
CCM2-206ENST00000474617 CDC37L1Q7L3B6 337 aa25.55■■□□□ 1.68
CCM2-206ENST00000474617 ANP32BQ92688 251 aaKnown RBP25.55■■□□□ 1.68
CCM2-206ENST00000474617 CFAP45Q9UL16 551 aa25.55■■□□□ 1.68
CCM2-206ENST00000474617 DUOX1Q9NRD9 1551 aa25.55■■□□□ 1.68
CCM2-206ENST00000474617 COL4A1P02462 1669 aa25.55■■□□□ 1.68
CCM2-206ENST00000474617 CYP7A1P22680 504 aa25.54■■□□□ 1.68
CCM2-206ENST00000474617 LIFRP42702 1097 aa25.54■■□□□ 1.68
CCM2-206ENST00000474617 RCAN1P53805 252 aa25.54■■□□□ 1.68
CCM2-206ENST00000474617 TMC4Q7Z404 712 aa25.54■■□□□ 1.68
CCM2-206ENST00000474617 STAG1Q8WVM7 1258 aa25.54■■□□□ 1.68
CCM2-206ENST00000474617 RAI14Q9P0K7 980 aa25.54■■□□□ 1.68
CCM2-206ENST00000474617 SLC4A4Q9Y6R1 1079 aa25.54■■□□□ 1.68
CCM2-206ENST00000474617 A0A0G2JLW4 131 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 MAGEB6P1A0A0J9YX57 407 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 JAK2O60674 1132 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 TDO2P48775 406 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 DNM1Q05193 864 aaKnown RBP25.53■■□□□ 1.68
CCM2-206ENST00000474617 SART3Q15020 963 aaKnown RBP25.53■■□□□ 1.68
CCM2-206ENST00000474617 CRY2Q49AN0 593 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 AKNAD1Q5T1N1 836 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 SGMS1Q86VZ5 419 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 TMTC2Q8N394 836 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 NBPF3Q9H094 633 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 ANAPC4Q9UJX5 808 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 KLF18A0A0U1RQI7 1052 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 ANTXR2P58335 489 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 RBM6P78332 1123 aaKnown RBP25.53■■□□□ 1.68
CCM2-206ENST00000474617 CCDC183Q5T5S1 534 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 TBC1D10CQ8IV04 446 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 ARMT1Q9H993 441 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 TMEM63CQ9P1W3 806 aa25.53■■□□□ 1.68
CCM2-206ENST00000474617 MAST2Q6P0Q8 1798 aa25.52■■□□□ 1.68
CCM2-206ENST00000474617 TCHHQ07283 1943 aa25.52■■□□□ 1.68
CCM2-206ENST00000474617 XDHP47989 1333 aa25.52■■□□□ 1.68
CCM2-206ENST00000474617 GOLGA8BA8MQT2 603 aa25.52■■□□□ 1.68
CCM2-206ENST00000474617 SH2B2O14492 632 aaPredicted RBP25.52■■□□□ 1.68
CCM2-206ENST00000474617 GYS1P13807 737 aa25.52■■□□□ 1.68
CCM2-206ENST00000474617 MFSD6Q6ZSS7 791 aa25.52■■□□□ 1.68
CCM2-206ENST00000474617 AMIGO3Q86WK7 504 aa25.52■■□□□ 1.68
CCM2-206ENST00000474617 BRIP1Q9BX63 1249 aa25.52■■□□□ 1.68
CCM2-206ENST00000474617 EPB41L4AQ9HCS5 686 aaPredicted RBP25.52■■□□□ 1.68
CCM2-206ENST00000474617 ABCF2Q9UG63 623 aa25.52■■□□□ 1.68
CCM2-206ENST00000474617 TNRC6CQ9HCJ0 1690 aaKnown RBP25.51■■□□□ 1.67
CCM2-206ENST00000474617 FIBPO43427 364 aa25.51■■□□□ 1.67
CCM2-206ENST00000474617 CTDNEP1O95476 244 aa25.51■■□□□ 1.67
CCM2-206ENST00000474617 CERS3Q8IU89 383 aa25.51■■□□□ 1.67
CCM2-206ENST00000474617 RPGRQ92834 1020 aaKnown RBP25.51■■□□□ 1.67
CCM2-206ENST00000474617 BRWD3Q6RI45 1802 aa25.51■■□□□ 1.67
CCM2-206ENST00000474617 MYH13Q9UKX3 1938 aa25.51■■□□□ 1.67
CCM2-206ENST00000474617 CHD4Q14839 1912 aa25.5■■□□□ 1.67
CCM2-206ENST00000474617 CPLX1O14810 134 aa25.5■■□□□ 1.67
CCM2-206ENST00000474617 RESTQ13127 1097 aa25.5■■□□□ 1.67
CCM2-206ENST00000474617 PRR5LQ6MZQ0 368 aa25.5■■□□□ 1.67
CCM2-206ENST00000474617 GAS2L3Q86XJ1 694 aa25.5■■□□□ 1.67
CCM2-206ENST00000474617 LCORLQ8N3X6 602 aa25.5■■□□□ 1.67
CCM2-206ENST00000474617 FLAD1Q8NFF5 587 aa25.5■■□□□ 1.67
CCM2-206ENST00000474617 RBM17Q96I25 401 aaKnown RBP25.5■■□□□ 1.67
CCM2-206ENST00000474617 CACNA1SQ13698 1873 aa25.5■■□□□ 1.67
CCM2-206ENST00000474617 NID2Q14112 1375 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms