RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 MECOMQ03112 1051 aa12.41□□□□□ -0.42
COL12A1-206ENST00000474564 C8orf34Q49A92 452 aa12.41□□□□□ -0.42
COL12A1-206ENST00000474564 RNF20Q5VTR2 975 aa12.41□□□□□ -0.42
COL12A1-206ENST00000474564 DPY19L2Q6NUT2 758 aa12.41□□□□□ -0.42
COL12A1-206ENST00000474564 AGBL3Q8NEM8 1001 aa12.41□□□□□ -0.42
COL12A1-206ENST00000474564 NACAP1Q9BZK3 213 aa12.41□□□□□ -0.42
COL12A1-206ENST00000474564 DUOX1Q9NRD9 1551 aa12.41□□□□□ -0.42
COL12A1-206ENST00000474564 CTNNA3Q9UI47 895 aa12.41□□□□□ -0.42
COL12A1-206ENST00000474564 TTF2Q9UNY4 1162 aaKnown RBP12.41□□□□□ -0.42
COL12A1-206ENST00000474564 JAG2Q9Y219 1238 aa12.41□□□□□ -0.42
COL12A1-206ENST00000474564 A0A1B0GUL6 1792 aa12.41□□□□□ -0.42
COL12A1-206ENST00000474564 SGSM2O43147 1006 aa12.4□□□□□ -0.42
COL12A1-206ENST00000474564 APPP05067 770 aa12.4□□□□□ -0.42
COL12A1-206ENST00000474564 RPS12P25398 132 aaKnown RBP12.4□□□□□ -0.42
COL12A1-206ENST00000474564 RBM5P52756 815 aaKnown RBP eCLIP12.4□□□□□ -0.42
COL12A1-206ENST00000474564 HDLBPQ00341 1268 aaKnown RBP12.4□□□□□ -0.42
COL12A1-206ENST00000474564 RSBN1LQ6PCB5 846 aaPredicted RBP12.4□□□□□ -0.42
COL12A1-206ENST00000474564 SLC51AQ86UW1 340 aa12.4□□□□□ -0.42
COL12A1-206ENST00000474564 AMOTL1Q8IY63 956 aa12.4□□□□□ -0.42
COL12A1-206ENST00000474564 TEKT1Q969V4 418 aa12.4□□□□□ -0.42
COL12A1-206ENST00000474564 MRIQ9BWK5 157 aa12.4□□□□□ -0.42
COL12A1-206ENST00000474564 KIAA1551Q9HCM1 1747 aa12.4□□□□□ -0.43
COL12A1-206ENST00000474564 F8W031 263 aaPredicted RBP12.39□□□□□ -0.43
COL12A1-206ENST00000474564 RAD17O75943 681 aa12.39□□□□□ -0.43
COL12A1-206ENST00000474564 VIL1P09327 827 aaKnown RBP12.39□□□□□ -0.43
COL12A1-206ENST00000474564 PRDX5P30044 214 aa12.39□□□□□ -0.43
COL12A1-206ENST00000474564 RASSF7Q02833 373 aa12.39□□□□□ -0.43
COL12A1-206ENST00000474564 DACT2Q5SW24 774 aa12.39□□□□□ -0.43
COL12A1-206ENST00000474564 NSUN4Q96CB9 384 aaKnown RBP12.39□□□□□ -0.43
COL12A1-206ENST00000474564 FAM227BQ96M60 508 aa12.39□□□□□ -0.43
COL12A1-206ENST00000474564 CRNKL1Q9BZJ0 848 aaKnown RBP12.39□□□□□ -0.43
COL12A1-206ENST00000474564 RNF181Q9P0P0 153 aa12.39□□□□□ -0.43
COL12A1-206ENST00000474564 LTBP1Q14766 1721 aa12.39□□□□□ -0.43
COL12A1-206ENST00000474564 CCDC171Q6TFL3 1326 aa12.38□□□□□ -0.43
COL12A1-206ENST00000474564 SNED1Q8TER0 1413 aa12.38□□□□□ -0.43
COL12A1-206ENST00000474564 MYO1BO43795 1136 aa12.38□□□□□ -0.43
COL12A1-206ENST00000474564 ZKSCAN1P17029 563 aaPredicted RBP12.38□□□□□ -0.43
COL12A1-206ENST00000474564 CXCL9Q07325 125 aa12.38□□□□□ -0.43
COL12A1-206ENST00000474564 HHIPL2Q6UWX4 724 aa12.38□□□□□ -0.43
COL12A1-206ENST00000474564 KIAA0825Q8IV33 1275 aa12.38□□□□□ -0.43
COL12A1-206ENST00000474564 TMOD2Q9NZR1 351 aa12.38□□□□□ -0.43
COL12A1-206ENST00000474564 GJA3Q9Y6H8 435 aa12.38□□□□□ -0.43
COL12A1-206ENST00000474564 ARFGEF1Q9Y6D6 1849 aa12.37□□□□□ -0.43
COL12A1-206ENST00000474564 A0A0D9SFI3 127 aa12.37□□□□□ -0.43
COL12A1-206ENST00000474564 H7C1D1 291 aa12.37□□□□□ -0.43
COL12A1-206ENST00000474564 FZD9O00144 591 aa12.37□□□□□ -0.43
COL12A1-206ENST00000474564 PSMD14O00487 310 aa12.37□□□□□ -0.43
COL12A1-206ENST00000474564 GPAA1O43292 621 aa12.37□□□□□ -0.43
COL12A1-206ENST00000474564 USP17L8P0C7I0 530 aa12.37□□□□□ -0.43
COL12A1-206ENST00000474564 YBX3P16989 372 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL12A1-206ENST00000474564 FAM163AQ96GL9 167 aaPredicted RBP12.37□□□□□ -0.43
COL12A1-206ENST00000474564 DAXXQ9UER7 740 aaPredicted RBP12.37□□□□□ -0.43
COL12A1-206ENST00000474564 SERPINA10Q9UK55 444 aa12.37□□□□□ -0.43
COL12A1-206ENST00000474564 U3KPZ7 1027 aaPredicted RBP12.37□□□□□ -0.43
COL12A1-206ENST00000474564 RPAP1Q9BWH6 1393 aaPredicted RBP12.37□□□□□ -0.43
COL12A1-206ENST00000474564 BRCA1P38398 1863 aaKnown RBP12.37□□□□□ -0.43
COL12A1-206ENST00000474564 MROH7-TTC4A0A0A0MT08 1334 aa12.37□□□□□ -0.43
COL12A1-206ENST00000474564 YDJCA8MPS7 323 aa12.36□□□□□ -0.43
COL12A1-206ENST00000474564 PATL2C9JE40 543 aaKnown RBP12.36□□□□□ -0.43
COL12A1-206ENST00000474564 MBD4O95243 580 aa12.36□□□□□ -0.43
COL12A1-206ENST00000474564 LMOD1P29536 600 aaPredicted RBP12.36□□□□□ -0.43
COL12A1-206ENST00000474564 USP5P45974 858 aa12.36□□□□□ -0.43
COL12A1-206ENST00000474564 DLGAP5Q15398 846 aa12.36□□□□□ -0.43
COL12A1-206ENST00000474564 C9orf131Q5VYM1 1079 aa12.36□□□□□ -0.43
COL12A1-206ENST00000474564 MIGA1Q8NAN2 632 aa12.36□□□□□ -0.43
COL12A1-206ENST00000474564 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
COL12A1-206ENST00000474564 OSBP2Q969R2 916 aa12.36□□□□□ -0.43
COL12A1-206ENST00000474564 DSCC1Q9BVC3 393 aa12.36□□□□□ -0.43
COL12A1-206ENST00000474564 C22orf23Q9BZE7 217 aa12.36□□□□□ -0.43
COL12A1-206ENST00000474564 KCNQ5Q9NR82 932 aa12.36□□□□□ -0.43
COL12A1-206ENST00000474564 SLC4A4Q9Y6R1 1079 aa12.36□□□□□ -0.43
COL12A1-206ENST00000474564 ZC3H4Q9UPT8 1303 aaKnown RBP12.36□□□□□ -0.43
COL12A1-206ENST00000474564 MYH13Q9UKX3 1938 aa12.35□□□□□ -0.43
COL12A1-206ENST00000474564 TCRBV5S4A2TA0A5A2 114 aa12.35□□□□□ -0.43
COL12A1-206ENST00000474564 SLC3A2P08195 630 aaKnown RBP12.35□□□□□ -0.43
COL12A1-206ENST00000474564 CRKP46108 304 aa12.35□□□□□ -0.43
COL12A1-206ENST00000474564 TDO2P48775 406 aa12.35□□□□□ -0.43
COL12A1-206ENST00000474564 SCNN1DP51172 638 aa12.35□□□□□ -0.43
COL12A1-206ENST00000474564 PPP4CP60510 307 aa12.35□□□□□ -0.43
COL12A1-206ENST00000474564 IMMTQ16891 758 aaKnown RBP12.35□□□□□ -0.43
COL12A1-206ENST00000474564 GPC2Q8N158 579 aa12.35□□□□□ -0.43
COL12A1-206ENST00000474564 DPF2Q92785 391 aa12.35□□□□□ -0.43
COL12A1-206ENST00000474564 PUS7LQ9H0K6 701 aaKnown RBP12.35□□□□□ -0.43
COL12A1-206ENST00000474564 NAPBQ9H115 298 aa12.35□□□□□ -0.43
COL12A1-206ENST00000474564 ARMT1Q9H993 441 aa12.35□□□□□ -0.43
COL12A1-206ENST00000474564 ATP8A2Q9NTI2 1148 aa12.35□□□□□ -0.43
COL12A1-206ENST00000474564 AATFQ9NY61 560 aaKnown RBP eCLIP12.35□□□□□ -0.43
COL12A1-206ENST00000474564 FER1L6Q2WGJ9 1857 aa12.35□□□□□ -0.43
COL12A1-206ENST00000474564 COL1A1P02452 1464 aaPredicted RBP12.34□□□□□ -0.43
COL12A1-206ENST00000474564 GPR75-ASB3A0A0A6YYF3 556 aa12.34□□□□□ -0.43
COL12A1-206ENST00000474564 M0R2C6 588 aa12.34□□□□□ -0.43
COL12A1-206ENST00000474564 BTDP43251 543 aa12.34□□□□□ -0.43
COL12A1-206ENST00000474564 DIXDC1Q155Q3 683 aa12.34□□□□□ -0.43
COL12A1-206ENST00000474564 GIMAP6Q6P9H5 292 aa12.34□□□□□ -0.43
COL12A1-206ENST00000474564 CERS5Q8N5B7 392 aa12.34□□□□□ -0.43
COL12A1-206ENST00000474564 ZDHHC15Q96MV8 337 aa12.34□□□□□ -0.43
COL12A1-206ENST00000474564 STRBPQ96SI9 672 aaKnown RBP12.34□□□□□ -0.43
COL12A1-206ENST00000474564 SEC62Q99442 399 aaKnown RBP12.34□□□□□ -0.43
COL12A1-206ENST00000474564 USP26Q9BXU7 913 aa12.34□□□□□ -0.43
COL12A1-206ENST00000474564 AKAP11Q9UKA4 1901 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms