RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 INTS13Q9NVM9 706 aa21.43■■□□□ 1.02
ECHDC1-214ENST00000474289 UTYO14607 1347 aa21.43■■□□□ 1.02
ECHDC1-214ENST00000474289 GTF2A1P52655 376 aaPredicted RBP21.43■■□□□ 1.02
ECHDC1-214ENST00000474289 MCM6Q14566 821 aa21.43■■□□□ 1.02
ECHDC1-214ENST00000474289 ZSWIM4Q9H7M6 989 aa21.43■■□□□ 1.02
ECHDC1-214ENST00000474289 FOXR1Q6PIV2 292 aa21.42■■□□□ 1.02
ECHDC1-214ENST00000474289 MPRIPQ6WCQ1 1025 aa21.42■■□□□ 1.02
ECHDC1-214ENST00000474289 LINS1Q8NG48 757 aa21.42■■□□□ 1.02
ECHDC1-214ENST00000474289 TUBE1Q9UJT0 475 aa21.42■■□□□ 1.02
ECHDC1-214ENST00000474289 RFX7Q2KHR2 1363 aa21.42■■□□□ 1.02
ECHDC1-214ENST00000474289 PRAMEF22A3QJZ6 481 aa21.41■■□□□ 1.02
ECHDC1-214ENST00000474289 CMA1P23946 247 aa21.41■■□□□ 1.02
ECHDC1-214ENST00000474289 BEND6Q5SZJ8 279 aaPredicted RBP21.41■■□□□ 1.02
ECHDC1-214ENST00000474289 MYSM1Q5VVJ2 828 aa21.41■■□□□ 1.02
ECHDC1-214ENST00000474289 CHST3Q7LGC8 479 aa21.41■■□□□ 1.02
ECHDC1-214ENST00000474289 ZNF274Q96GC6 653 aaPredicted RBP21.41■■□□□ 1.02
ECHDC1-214ENST00000474289 A0A0G2JLW4 131 aa21.4■■□□□ 1.02
ECHDC1-214ENST00000474289 A0A1B0GUL7 405 aa21.4■■□□□ 1.02
ECHDC1-214ENST00000474289 STX10O60499 249 aa21.4■■□□□ 1.02
ECHDC1-214ENST00000474289 NOM1Q5C9Z4 860 aaKnown RBP21.4■■□□□ 1.02
ECHDC1-214ENST00000474289 CCDC12Q8WUD4 166 aaPredicted RBP21.4■■□□□ 1.02
ECHDC1-214ENST00000474289 HNRNPLLQ8WVV9 542 aaKnown RBP21.4■■□□□ 1.02
ECHDC1-214ENST00000474289 FANCLQ9NW38 375 aa21.4■■□□□ 1.02
ECHDC1-214ENST00000474289 N4BP1O75113 896 aaKnown RBP21.4■■□□□ 1.02
ECHDC1-214ENST00000474289 CHMP4BP1P59074 171 aa21.4■■□□□ 1.02
ECHDC1-214ENST00000474289 TBX2Q13207 712 aaPredicted RBP21.4■■□□□ 1.02
ECHDC1-214ENST00000474289 DDX46Q7L014 1031 aaKnown RBP21.4■■□□□ 1.02
ECHDC1-214ENST00000474289 PACS2Q86VP3 889 aa21.4■■□□□ 1.02
ECHDC1-214ENST00000474289 RGS22Q8NE09 1264 aa21.4■■□□□ 1.02
ECHDC1-214ENST00000474289 ANKZF1Q9H8Y5 726 aa21.4■■□□□ 1.02
ECHDC1-214ENST00000474289 SLIT1O75093 1534 aa21.39■■□□□ 1.02
ECHDC1-214ENST00000474289 SETD1BQ9UPS6 1966 aaKnown RBP21.39■■□□□ 1.02
ECHDC1-214ENST00000474289 RPS6KA5O75582 802 aa21.39■■□□□ 1.02
ECHDC1-214ENST00000474289 MAGEA9P43362 315 aa21.39■■□□□ 1.02
ECHDC1-214ENST00000474289 TC2NQ8N9U0 490 aa21.39■■□□□ 1.02
ECHDC1-214ENST00000474289 WDHD1O75717 1129 aaPredicted RBP21.39■■□□□ 1.01
ECHDC1-214ENST00000474289 KARSQ15046 597 aaKnown RBP21.39■■□□□ 1.01
ECHDC1-214ENST00000474289 HDXQ7Z353 690 aa21.39■■□□□ 1.01
ECHDC1-214ENST00000474289 PDILTQ8N807 584 aa21.39■■□□□ 1.01
ECHDC1-214ENST00000474289 C8orf76Q96K31 380 aa21.39■■□□□ 1.01
ECHDC1-214ENST00000474289 DESI2Q9BSY9 194 aa21.39■■□□□ 1.01
ECHDC1-214ENST00000474289 E7EWF7 191 aa21.38■■□□□ 1.01
ECHDC1-214ENST00000474289 SRGAP1Q7Z6B7 1085 aa21.38■■□□□ 1.01
ECHDC1-214ENST00000474289 IRX2Q9BZI1 471 aaPredicted RBP21.38■■□□□ 1.01
ECHDC1-214ENST00000474289 FAN1Q9Y2M0 1017 aa21.38■■□□□ 1.01
ECHDC1-214ENST00000474289 CUTAO60888 179 aa21.38■■□□□ 1.01
ECHDC1-214ENST00000474289 SYKP43405 635 aa21.38■■□□□ 1.01
ECHDC1-214ENST00000474289 CEBPAP49715 358 aaPredicted RBP21.38■■□□□ 1.01
ECHDC1-214ENST00000474289 ADKP55263 362 aaKnown RBP21.38■■□□□ 1.01
ECHDC1-214ENST00000474289 PNOCQ13519 176 aa21.38■■□□□ 1.01
ECHDC1-214ENST00000474289 TTC31Q49AM3 519 aaPredicted RBP21.38■■□□□ 1.01
ECHDC1-214ENST00000474289 TNNI3KQ59H18 835 aa21.38■■□□□ 1.01
ECHDC1-214ENST00000474289 ANO1Q5XXA6 986 aa21.38■■□□□ 1.01
ECHDC1-214ENST00000474289 GJB4Q9NTQ9 266 aa21.38■■□□□ 1.01
ECHDC1-214ENST00000474289 GEMIN8Q9NWZ8 242 aaKnown RBP21.38■■□□□ 1.01
ECHDC1-214ENST00000474289 FPGT-TNNI3KV9GXZ4 949 aa21.38■■□□□ 1.01
ECHDC1-214ENST00000474289 EIF3CLB5ME19 914 aaKnown RBP21.37■■□□□ 1.01
ECHDC1-214ENST00000474289 MARCKSP29966 332 aaPredicted RBP21.37■■□□□ 1.01
ECHDC1-214ENST00000474289 USP5P45974 858 aa21.37■■□□□ 1.01
ECHDC1-214ENST00000474289 SYNE3Q6ZMZ3 975 aa21.37■■□□□ 1.01
ECHDC1-214ENST00000474289 BRAPQ7Z569 592 aa21.37■■□□□ 1.01
ECHDC1-214ENST00000474289 PNKPQ96T60 521 aa21.37■■□□□ 1.01
ECHDC1-214ENST00000474289 EIF3CQ99613 913 aaKnown RBP21.37■■□□□ 1.01
ECHDC1-214ENST00000474289 SUGCTQ9HAC7 445 aa21.37■■□□□ 1.01
ECHDC1-214ENST00000474289 SH3TC1Q8TE82 1336 aa21.37■■□□□ 1.01
ECHDC1-214ENST00000474289 KIF28PB7ZC32 967 aa21.37■■□□□ 1.01
ECHDC1-214ENST00000474289 HSP90AA4PQ58FG1 418 aa21.37■■□□□ 1.01
ECHDC1-214ENST00000474289 ZNF530Q6P9A1 599 aaPredicted RBP21.37■■□□□ 1.01
ECHDC1-214ENST00000474289 MRPL44Q9H9J2 332 aaKnown RBP21.37■■□□□ 1.01
ECHDC1-214ENST00000474289 RAB21Q9UL25 225 aa21.37■■□□□ 1.01
ECHDC1-214ENST00000474289 EID1Q9Y6B2 187 aa21.37■■□□□ 1.01
ECHDC1-214ENST00000474289 LRRC59Q96AG4 307 aaKnown RBP21.36■■□□□ 1.01
ECHDC1-214ENST00000474289 PUF60Q9UHX1 559 aaKnown RBP21.36■■□□□ 1.01
ECHDC1-214ENST00000474289 L1RE1Q9UN81 338 aa21.36■■□□□ 1.01
ECHDC1-214ENST00000474289 JRKLQ9Y4A0 524 aa21.36■■□□□ 1.01
ECHDC1-214ENST00000474289 MYO1BO43795 1136 aa21.36■■□□□ 1.01
ECHDC1-214ENST00000474289 EPHA10Q5JZY3 1008 aa21.36■■□□□ 1.01
ECHDC1-214ENST00000474289 MSL3Q8N5Y2 521 aaKnown RBP21.36■■□□□ 1.01
ECHDC1-214ENST00000474289 HAUS7Q99871 368 aa21.36■■□□□ 1.01
ECHDC1-214ENST00000474289 LTN1O94822 1766 aa21.35■■□□□ 1.01
ECHDC1-214ENST00000474289 EIF3JO75822 258 aaKnown RBP21.35■■□□□ 1.01
ECHDC1-214ENST00000474289 TFCP2Q12800 502 aa21.35■■□□□ 1.01
ECHDC1-214ENST00000474289 WWC2Q6AWC2 1192 aa21.35■■□□□ 1.01
ECHDC1-214ENST00000474289 C19orf44Q9H6X5 657 aa21.35■■□□□ 1.01
ECHDC1-214ENST00000474289 GPHNQ9NQX3 736 aaPredicted RBP21.35■■□□□ 1.01
ECHDC1-214ENST00000474289 AKAP2Q9Y2D5 859 aa21.35■■□□□ 1.01
ECHDC1-214ENST00000474289 IGKV5-2P06315 115 aa21.35■■□□□ 1.01
ECHDC1-214ENST00000474289 OLFM4Q6UX06 510 aa21.35■■□□□ 1.01
ECHDC1-214ENST00000474289 MSANTD4Q8NCY6 345 aa21.35■■□□□ 1.01
ECHDC1-214ENST00000474289 DBNDD2Q9BQY9 259 aa21.35■■□□□ 1.01
ECHDC1-214ENST00000474289 DSCC1Q9BVC3 393 aa21.35■■□□□ 1.01
ECHDC1-214ENST00000474289 ABCB6Q9NP58 842 aa21.35■■□□□ 1.01
ECHDC1-214ENST00000474289 AIMP1Q12904 312 aaKnown RBP21.34■■□□□ 1.01
ECHDC1-214ENST00000474289 MTF1Q14872 753 aa21.34■■□□□ 1.01
ECHDC1-214ENST00000474289 SPECC1LQ69YQ0 1117 aa21.34■■□□□ 1.01
ECHDC1-214ENST00000474289 PLPPR3Q6T4P5 718 aa21.34■■□□□ 1.01
ECHDC1-214ENST00000474289 PAXIP1Q6ZW49 1069 aaPredicted RBP21.34■■□□□ 1.01
ECHDC1-214ENST00000474289 KBTBD3Q8NAB2 608 aa21.34■■□□□ 1.01
ECHDC1-214ENST00000474289 IP6K1Q92551 441 aa21.34■■□□□ 1.01
ECHDC1-214ENST00000474289 CHMP4CQ96CF2 233 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms