RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 SLC4A8Q2Y0W8 1093 aa25.63■■□□□ 1.69
APP-215ENST00000474136 MFSD14BQ5SR56 506 aa25.63■■□□□ 1.69
APP-215ENST00000474136 LMBR1LQ6UX01 489 aa25.63■■□□□ 1.69
APP-215ENST00000474136 TMEM39BQ9GZU3 492 aa25.63■■□□□ 1.69
APP-215ENST00000474136 ZFYVE28Q9HCC9 887 aa25.63■■□□□ 1.69
APP-215ENST00000474136 A0A1B0GUL6 1792 aa25.62■■□□□ 1.69
APP-215ENST00000474136 WWC1Q8IX03 1113 aa25.62■■□□□ 1.69
APP-215ENST00000474136 F6X3S4 739 aa25.61■■□□□ 1.69
APP-215ENST00000474136 GTF2A2P52657 109 aa25.61■■□□□ 1.69
APP-215ENST00000474136 MAP3K9P80192 1104 aa25.61■■□□□ 1.69
APP-215ENST00000474136 LDHAL6AQ6ZMR3 332 aa25.61■■□□□ 1.69
APP-215ENST00000474136 NBPF11Q86T75 865 aa25.61■■□□□ 1.69
APP-215ENST00000474136 DZIP1LQ8IYY4 767 aaKnown RBP25.61■■□□□ 1.69
APP-215ENST00000474136 TDRD7Q8NHU6 1098 aaKnown RBP25.61■■□□□ 1.69
APP-215ENST00000474136 OTUD5Q96G74 571 aa25.61■■□□□ 1.69
APP-215ENST00000474136 SERPINA10Q9UK55 444 aa25.61■■□□□ 1.69
APP-215ENST00000474136 GYG1P46976 350 aa25.6■■□□□ 1.69
APP-215ENST00000474136 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.6■■□□□ 1.69
APP-215ENST00000474136 SH3TC2Q8TF17 1288 aa25.6■■□□□ 1.69
APP-215ENST00000474136 ARHGAP39Q9C0H5 1083 aa25.6■■□□□ 1.69
APP-215ENST00000474136 CNNM1Q9NRU3 951 aa25.6■■□□□ 1.69
APP-215ENST00000474136 ARHGEF6Q15052 776 aa25.59■■□□□ 1.69
APP-215ENST00000474136 GRIK5Q16478 980 aa25.59■■□□□ 1.69
APP-215ENST00000474136 TAF7LQ5H9L4 462 aa25.59■■□□□ 1.69
APP-215ENST00000474136 H0YGN5 161 aa25.58■■□□□ 1.69
APP-215ENST00000474136 CCDC27Q2M243 656 aa25.58■■□□□ 1.69
APP-215ENST00000474136 CCDC57Q2TAC2 916 aa25.58■■□□□ 1.69
APP-215ENST00000474136 BEND3Q5T5X7 828 aa25.58■■□□□ 1.69
APP-215ENST00000474136 CSADQ9Y600 493 aa25.58■■□□□ 1.69
APP-215ENST00000474136 CRKP46108 304 aa25.57■■□□□ 1.68
APP-215ENST00000474136 FAM84BQ96KN1 310 aaPredicted RBP25.57■■□□□ 1.68
APP-215ENST00000474136 HIBADHP31937 336 aaKnown RBP25.56■■□□□ 1.68
APP-215ENST00000474136 TRIOBPQ9H2D6 2365 aa25.56■■□□□ 1.68
APP-215ENST00000474136 CEP290O15078 2479 aa25.55■■□□□ 1.68
APP-215ENST00000474136 VAMP4O75379 141 aa25.55■■□□□ 1.68
APP-215ENST00000474136 ECM2O94769 699 aaPredicted RBP25.55■■□□□ 1.68
APP-215ENST00000474136 CACNB3P54284 484 aa25.55■■□□□ 1.68
APP-215ENST00000474136 SPDYE5A6NIY4 337 aa25.54■■□□□ 1.68
APP-215ENST00000474136 BTBD19C9JJ37 291 aa25.54■■□□□ 1.68
APP-215ENST00000474136 TLR2O60603 784 aa25.54■■□□□ 1.68
APP-215ENST00000474136 TNNI2P48788 182 aa25.54■■□□□ 1.68
APP-215ENST00000474136 UBE4AQ14139 1066 aa25.54■■□□□ 1.68
APP-215ENST00000474136 PUS3Q9BZE2 481 aaKnown RBP25.54■■□□□ 1.68
APP-215ENST00000474136 SNCAIPQ9Y6H5 919 aa25.54■■□□□ 1.68
APP-215ENST00000474136 FANCIQ9NVI1 1328 aa25.54■■□□□ 1.68
APP-215ENST00000474136 ZSWIM8A7E2V4 1837 aa25.53■■□□□ 1.68
APP-215ENST00000474136 LACTBP83111 547 aaPredicted RBP25.53■■□□□ 1.68
APP-215ENST00000474136 IQSEC3Q9UPP2 1182 aaPredicted RBP25.53■■□□□ 1.68
APP-215ENST00000474136 IL16Q14005 1332 aa25.53■■□□□ 1.68
APP-215ENST00000474136 GRM8O00222 908 aa25.52■■□□□ 1.68
APP-215ENST00000474136 CETPP11597 493 aa25.51■■□□□ 1.67
APP-215ENST00000474136 ZKSCAN4Q969J2 545 aaPredicted RBP25.51■■□□□ 1.67
APP-215ENST00000474136 IRF6O14896 467 aa25.5■■□□□ 1.67
APP-215ENST00000474136 CHAF1AQ13111 956 aaPredicted RBP25.5■■□□□ 1.67
APP-215ENST00000474136 KIF22Q14807 665 aa25.5■■□□□ 1.67
APP-215ENST00000474136 ERO1BQ86YB8 467 aa25.5■■□□□ 1.67
APP-215ENST00000474136 WRNIP1Q96S55 665 aa25.5■■□□□ 1.67
APP-215ENST00000474136 SZT2Q5T011 3432 aa25.5■■□□□ 1.67
APP-215ENST00000474136 ARAP2Q8WZ64 1704 aa25.49■■□□□ 1.67
APP-215ENST00000474136 MTFR1Q15390 333 aa25.49■■□□□ 1.67
APP-215ENST00000474136 CHRDL2Q6WN34 429 aa25.49■■□□□ 1.67
APP-215ENST00000474136 SHISA4Q96DD7 197 aa25.49■■□□□ 1.67
APP-215ENST00000474136 WDHD1O75717 1129 aaPredicted RBP25.48■■□□□ 1.67
APP-215ENST00000474136 CTGFP29279 349 aa25.48■■□□□ 1.67
APP-215ENST00000474136 EXOSC9Q06265 439 aaKnown RBP25.48■■□□□ 1.67
APP-215ENST00000474136 SNAPC2Q13487 334 aa25.48■■□□□ 1.67
APP-215ENST00000474136 FBXO33Q7Z6M2 555 aa25.47■■□□□ 1.67
APP-215ENST00000474136 ZCCHC17Q9NP64 241 aaKnown RBP25.47■■□□□ 1.67
APP-215ENST00000474136 C9orf78Q9NZ63 289 aaPredicted RBP25.47■■□□□ 1.67
APP-215ENST00000474136 SUCLG2Q96I99 432 aa25.46■■□□□ 1.67
APP-215ENST00000474136 CPA4Q9UI42 421 aa25.46■■□□□ 1.67
APP-215ENST00000474136 RIPOR2Q9Y4F9 1068 aa25.46■■□□□ 1.67
APP-215ENST00000474136 HNRNPUQ00839 825 aaKnown RBP eCLIP25.45■■□□□ 1.66
APP-215ENST00000474136 PPIL2Q13356 520 aa25.45■■□□□ 1.66
APP-215ENST00000474136 C17orf99Q6UX52 265 aa25.45■■□□□ 1.66
APP-215ENST00000474136 VPS37DQ86XT2 251 aa25.45■■□□□ 1.66
APP-215ENST00000474136 TEKT1Q969V4 418 aa25.45■■□□□ 1.66
APP-215ENST00000474136 KAZALD1Q96I82 304 aa25.45■■□□□ 1.66
APP-215ENST00000474136 SALL2Q9Y467 1007 aaPredicted RBP25.45■■□□□ 1.66
APP-215ENST00000474136 GNRH1P01148 92 aa25.44■■□□□ 1.66
APP-215ENST00000474136 PRMT2P55345 433 aa25.44■■□□□ 1.66
APP-215ENST00000474136 HDLBPQ00341 1268 aaKnown RBP25.44■■□□□ 1.66
APP-215ENST00000474136 NCBP3Q53F19 620 aaKnown RBP25.44■■□□□ 1.66
APP-215ENST00000474136 DPF3Q92784 378 aa25.44■■□□□ 1.66
APP-215ENST00000474136 YTHDC1Q96MU7 727 aaKnown RBP25.44■■□□□ 1.66
APP-215ENST00000474136 RBM27Q9P2N5 1060 aaKnown RBP25.44■■□□□ 1.66
APP-215ENST00000474136 PSMC4P43686 418 aa25.43■■□□□ 1.66
APP-215ENST00000474136 APOBEC3HQ6NTF7 200 aaKnown RBP25.43■■□□□ 1.66
APP-215ENST00000474136 MIGA2Q7L4E1 593 aa25.43■■□□□ 1.66
APP-215ENST00000474136 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.43■■□□□ 1.66
APP-215ENST00000474136 TRIM47Q96LD4 638 aa25.43■■□□□ 1.66
APP-215ENST00000474136 RANBP2P49792 3224 aaKnown RBP25.42■■□□□ 1.66
APP-215ENST00000474136 FRAT2O75474 233 aaPredicted RBP25.42■■□□□ 1.66
APP-215ENST00000474136 INPP5BP32019 993 aa25.42■■□□□ 1.66
APP-215ENST00000474136 LRRC24Q50LG9 513 aa25.42■■□□□ 1.66
APP-215ENST00000474136 SLC4A10Q6U841 1118 aa25.42■■□□□ 1.66
APP-215ENST00000474136 FAM83AQ86UY5 434 aa25.42■■□□□ 1.66
APP-215ENST00000474136 TBC1D22AQ8WUA7 517 aa25.42■■□□□ 1.66
APP-215ENST00000474136 ZDHHC15Q96MV8 337 aa25.42■■□□□ 1.66
APP-215ENST00000474136 TMOD2Q9NZR1 351 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms