RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 CHAF1AQ13111 956 aaPredicted RBP31.12■■■□□ 2.57
PKD1-211ENST00000474088 GRIK5Q16478 980 aa31.12■■■□□ 2.57
PKD1-211ENST00000474088 ALDH1L2Q3SY69 923 aa31.12■■■□□ 2.57
PKD1-211ENST00000474088 ANKRD13AQ8IZ07 590 aa31.12■■■□□ 2.57
PKD1-211ENST00000474088 FRAT2O75474 233 aaPredicted RBP31.11■■■□□ 2.57
PKD1-211ENST00000474088 TBC1D22AQ8WUA7 517 aa31.11■■■□□ 2.57
PKD1-211ENST00000474088 CDCA7LQ96GN5 454 aa31.1■■■□□ 2.57
PKD1-211ENST00000474088 TEPSINQ96N21 525 aa31.1■■■□□ 2.57
PKD1-211ENST00000474088 TCP10L2B9ZVM9 353 aa31.09■■■□□ 2.57
PKD1-211ENST00000474088 BCAMP50895 628 aa31.09■■■□□ 2.57
PKD1-211ENST00000474088 HDLBPQ00341 1268 aaKnown RBP31.09■■■□□ 2.57
PKD1-211ENST00000474088 ARAP2Q8WZ64 1704 aa31.09■■■□□ 2.57
PKD1-211ENST00000474088 IGF2BP3O00425 579 aaKnown RBP eCLIP31.08■■■□□ 2.57
PKD1-211ENST00000474088 GJA5P36382 358 aa31.08■■■□□ 2.57
PKD1-211ENST00000474088 FBXO46Q6PJ61 603 aaPredicted RBP31.08■■■□□ 2.57
PKD1-211ENST00000474088 FGFR2P21802 821 aa31.07■■■□□ 2.56
PKD1-211ENST00000474088 TNNI2P48788 182 aa31.07■■■□□ 2.56
PKD1-211ENST00000474088 IFIT1P09914 478 aaKnown RBP31.06■■■□□ 2.56
PKD1-211ENST00000474088 RFX5P48382 616 aaPredicted RBP31.06■■■□□ 2.56
PKD1-211ENST00000474088 PUM3Q15397 648 aaKnown RBP31.06■■■□□ 2.56
PKD1-211ENST00000474088 CDAN1Q8IWY9 1227 aa31.06■■■□□ 2.56
PKD1-211ENST00000474088 MRIQ9BWK5 157 aa31.06■■■□□ 2.56
PKD1-211ENST00000474088 TMEM39BQ9GZU3 492 aa31.06■■■□□ 2.56
PKD1-211ENST00000474088 SMC4Q9NTJ3 1288 aa31.06■■■□□ 2.56
PKD1-211ENST00000474088 KIF16BQ96L93 1317 aa31.05■■■□□ 2.56
PKD1-211ENST00000474088 EYA2O00167 538 aa31.05■■■□□ 2.56
PKD1-211ENST00000474088 TRMT2AQ8IZ69 625 aaKnown RBP31.05■■■□□ 2.56
PKD1-211ENST00000474088 TEKT1Q969V4 418 aa31.05■■■□□ 2.56
PKD1-211ENST00000474088 OTUD7BQ6GQQ9 843 aa31.04■■■□□ 2.56
PKD1-211ENST00000474088 ELP3Q9H9T3 547 aa31.04■■■□□ 2.56
PKD1-211ENST00000474088 LAMB1P07942 1786 aa31.04■■■□□ 2.56
PKD1-211ENST00000474088 TESPA1A2RU30 521 aaPredicted RBP31.03■■■□□ 2.56
PKD1-211ENST00000474088 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.03■■■□□ 2.56
PKD1-211ENST00000474088 OPTNQ96CV9 577 aa31.03■■■□□ 2.56
PKD1-211ENST00000474088 ZDHHC15Q96MV8 337 aa31.02■■■□□ 2.56
PKD1-211ENST00000474088 PTPN18Q99952 460 aa31.02■■■□□ 2.56
PKD1-211ENST00000474088 SUGT1Q9Y2Z0 365 aa31.02■■■□□ 2.56
PKD1-211ENST00000474088 MAP3K9P80192 1104 aa31.01■■■□□ 2.55
PKD1-211ENST00000474088 LPIN2Q92539 896 aa31.01■■■□□ 2.55
PKD1-211ENST00000474088 SLC5A1P13866 664 aa31■■■□□ 2.55
PKD1-211ENST00000474088 CACNB3P54284 484 aa31■■■□□ 2.55
PKD1-211ENST00000474088 ATG9AQ7Z3C6 839 aa31■■■□□ 2.55
PKD1-211ENST00000474088 MAST3O60307 1309 aa30.99■■■□□ 2.55
PKD1-211ENST00000474088 CT47B1P0C2W7 299 aaPredicted RBP30.99■■■□□ 2.55
PKD1-211ENST00000474088 CRHR2Q13324 411 aa30.99■■■□□ 2.55
PKD1-211ENST00000474088 APOBEC3HQ6NTF7 200 aaKnown RBP30.99■■■□□ 2.55
PKD1-211ENST00000474088 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.99■■■□□ 2.55
PKD1-211ENST00000474088 MS4A4AQ96JQ5 239 aa30.99■■■□□ 2.55
PKD1-211ENST00000474088 OTOFQ9HC10 1997 aa30.98■■■□□ 2.55
PKD1-211ENST00000474088 UBTFL1P0CB47 393 aaPredicted RBP30.98■■■□□ 2.55
PKD1-211ENST00000474088 VGLL4Q14135 290 aa30.98■■■□□ 2.55
PKD1-211ENST00000474088 HHIPL2Q6UWX4 724 aa30.98■■■□□ 2.55
PKD1-211ENST00000474088 TMOD2Q9NZR1 351 aa30.98■■■□□ 2.55
PKD1-211ENST00000474088 NOB1Q9ULX3 412 aaKnown RBP30.98■■■□□ 2.55
PKD1-211ENST00000474088 TRIM17Q9Y577 477 aa30.98■■■□□ 2.55
PKD1-211ENST00000474088 CNKSR2Q8WXI2 1034 aa30.97■■■□□ 2.55
PKD1-211ENST00000474088 FBXO3Q9UK99 471 aa30.97■■■□□ 2.55
PKD1-211ENST00000474088 FKBP1CQ5VVH2 108 aa30.96■■■□□ 2.55
PKD1-211ENST00000474088 OTOP1Q7RTM1 612 aa30.96■■■□□ 2.55
PKD1-211ENST00000474088 FAM83AQ86UY5 434 aa30.96■■■□□ 2.55
PKD1-211ENST00000474088 WDR66Q8TBY9 1149 aa30.96■■■□□ 2.55
PKD1-211ENST00000474088 CSADQ9Y600 493 aa30.96■■■□□ 2.55
PKD1-211ENST00000474088 ERO1AQ96HE7 468 aa30.95■■■□□ 2.55
PKD1-211ENST00000474088 CIAO1O76071 339 aa30.94■■■□□ 2.54
PKD1-211ENST00000474088 API5Q9BZZ5 524 aaKnown RBP30.94■■■□□ 2.54
PKD1-211ENST00000474088 SIL1Q9H173 461 aa30.94■■■□□ 2.54
PKD1-211ENST00000474088 GTF2A2P52657 109 aa30.93■■■□□ 2.54
PKD1-211ENST00000474088 CEP126Q9P2H0 1117 aa30.93■■■□□ 2.54
PKD1-211ENST00000474088 CD99L2Q8TCZ2 262 aa30.92■■■□□ 2.54
PKD1-211ENST00000474088 BRI3BPQ8WY22 251 aa30.92■■■□□ 2.54
PKD1-211ENST00000474088 HOOK2Q96ED9 719 aa30.92■■■□□ 2.54
PKD1-211ENST00000474088 OTUD5Q96G74 571 aa30.92■■■□□ 2.54
PKD1-211ENST00000474088 HDAC5Q9UQL6 1122 aa30.92■■■□□ 2.54
PKD1-211ENST00000474088 CCL15-CCL14A0A0B4J2E2 113 aa30.91■■■□□ 2.54
PKD1-211ENST00000474088 SP3Q02447 781 aa30.91■■■□□ 2.54
PKD1-211ENST00000474088 CCL15Q16663 113 aa30.91■■■□□ 2.54
PKD1-211ENST00000474088 ATP2B3Q16720 1220 aa30.91■■■□□ 2.54
PKD1-211ENST00000474088 SLC34A2O95436 690 aa30.9■■■□□ 2.54
PKD1-211ENST00000474088 LRRFIP2Q9Y608 721 aaKnown RBP30.9■■■□□ 2.54
PKD1-211ENST00000474088 SNCAIPQ9Y6H5 919 aa30.9■■■□□ 2.54
PKD1-211ENST00000474088 SPDYE5A6NIY4 337 aa30.89■■■□□ 2.54
PKD1-211ENST00000474088 WRNIP1Q96S55 665 aa30.89■■■□□ 2.54
PKD1-211ENST00000474088 GNL3LQ9NVN8 582 aaKnown RBP30.89■■■□□ 2.54
PKD1-211ENST00000474088 PTPN22Q9Y2R2 807 aa30.89■■■□□ 2.54
PKD1-211ENST00000474088 TNRC18O15417 2968 aaPredicted RBP30.88■■■□□ 2.53
PKD1-211ENST00000474088 IL15P40933 162 aaPredicted RBP30.88■■■□□ 2.53
PKD1-211ENST00000474088 ERO1BQ86YB8 467 aa30.88■■■□□ 2.53
PKD1-211ENST00000474088 ZKSCAN4Q969J2 545 aaPredicted RBP30.88■■■□□ 2.53
PKD1-211ENST00000474088 EFCC1Q9HA90 598 aa30.88■■■□□ 2.53
PKD1-211ENST00000474088 DAGLAQ9Y4D2 1042 aa30.88■■■□□ 2.53
PKD1-211ENST00000474088 TAF1CQ15572 869 aaPredicted RBP30.87■■■□□ 2.53
PKD1-211ENST00000474088 DCAF15Q66K64 600 aa30.87■■■□□ 2.53
PKD1-211ENST00000474088 ZFYVE28Q9HCC9 887 aa30.87■■■□□ 2.53
PKD1-211ENST00000474088 PA2G4Q9UQ80 394 aaKnown RBP30.87■■■□□ 2.53
PKD1-211ENST00000474088 RPAP1Q9BWH6 1393 aaPredicted RBP30.87■■■□□ 2.53
PKD1-211ENST00000474088 CCER2I3L3R5 266 aa30.86■■■□□ 2.53
PKD1-211ENST00000474088 PRDX5P30044 214 aa30.86■■■□□ 2.53
PKD1-211ENST00000474088 RARSP54136 660 aaKnown RBP30.86■■■□□ 2.53
PKD1-211ENST00000474088 FAM43AQ8N2R8 423 aa30.86■■■□□ 2.53
PKD1-211ENST00000474088 FAM151AQ8WW52 585 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms